{"id":"https://openalex.org/W2137938313","doi":"https://doi.org/10.7551/978-0-262-31050-5-ch016","title":"Evolved Modular Epistasis in Artificial Organisms","display_name":"Evolved Modular Epistasis in Artificial Organisms","publication_year":2012,"publication_date":"2012-07-02","ids":{"openalex":"https://openalex.org/W2137938313","doi":"https://doi.org/10.7551/978-0-262-31050-5-ch016","mag":"2137938313"},"language":"en","primary_location":{"id":"doi:10.7551/978-0-262-31050-5-ch016","is_oa":false,"landing_page_url":"https://doi.org/10.7551/978-0-262-31050-5-ch016","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Life 13","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://digital.csic.es/bitstream/10261/112546/1/evolved_modular_epistasis_Valverde.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074561818","display_name":"Sergi Valverde","orcid":"https://orcid.org/0000-0002-2150-9610"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Sergi Valverde","raw_affiliation_strings":["Pompeu Fabra University"],"affiliations":[{"raw_affiliation_string":"Pompeu Fabra University","institution_ids":["https://openalex.org/I170486558"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5046878011","display_name":"Ricard V. Sol\u00e9","orcid":"https://orcid.org/0000-0001-6974-1008"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Pompeu Fabra University","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I4210135169","display_name":"Institut de Biologia Evolutiva","ror":"https://ror.org/044mj7r89","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I170486558","https://openalex.org/I4210135169"]},{"id":"https://openalex.org/I1308548392","display_name":"Santa Fe Institute","ror":"https://ror.org/01arysc35","country_code":"US","type":"funder","lineage":["https://openalex.org/I1308548392"]}],"countries":["ES","US"],"is_corresponding":false,"raw_author_name":"Ricard V. Sol\u00e9","raw_affiliation_strings":["Institut de Biologia Evolutiva (CSIC-UPF), Passeig Maritim de la Barceloneta, 37-49, 08003 Barcelona, Spain","ICREA-Complex Systems Lab, Universitat Pompeu Fabra, Dr Aiguader 88, 08003 Barcelona, Spain","Santa Fe Institute, 1399 Hyde Park Road, Santa Fe NM 87501"],"affiliations":[{"raw_affiliation_string":"Institut de Biologia Evolutiva (CSIC-UPF), Passeig Maritim de la Barceloneta, 37-49, 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I4210135169"]},{"raw_affiliation_string":"ICREA-Complex Systems Lab, Universitat Pompeu Fabra, Dr Aiguader 88, 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I170486558","https://openalex.org/I11932220"]},{"raw_affiliation_string":"Santa Fe Institute, 1399 Hyde Park Road, Santa Fe NM 87501","institution_ids":["https://openalex.org/I1308548392"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5074561818"],"corresponding_institution_ids":["https://openalex.org/I170486558"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.13640575,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"111","last_page":"115"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11252","display_name":"Evolutionary Game Theory and Cooperation","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.984000027179718,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6387285590171814},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.6122424006462097},{"id":"https://openalex.org/keywords/epistasis","display_name":"Epistasis","score":0.5756553411483765},{"id":"https://openalex.org/keywords/artificial-life","display_name":"Artificial life","score":0.5203146934509277},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.47608911991119385},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3098861575126648},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10264495015144348},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09527650475502014}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6387285590171814},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.6122424006462097},{"id":"https://openalex.org/C61727976","wikidata":"https://www.wikidata.org/wiki/Q751748","display_name":"Epistasis","level":3,"score":0.5756553411483765},{"id":"https://openalex.org/C19273510","wikidata":"https://www.wikidata.org/wiki/Q263847","display_name":"Artificial life","level":2,"score":0.5203146934509277},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.47608911991119385},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3098861575126648},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10264495015144348},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09527650475502014},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.7551/978-0-262-31050-5-ch016","is_oa":false,"landing_page_url":"https://doi.org/10.7551/978-0-262-31050-5-ch016","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Artificial Life 13","raw_type":"proceedings-article"},{"id":"pmh:oai:digital.csic.es:10261/112546","is_oa":true,"landing_page_url":"http://hdl.handle.net/10261/112546","pdf_url":"https://digital.csic.es/bitstream/10261/112546/1/evolved_modular_epistasis_Valverde.pdf","source":{"id":"https://openalex.org/S4306401639","display_name":"DIGITAL.CSIC (Spanish National Research Council (CSIC))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134820265","host_organization_name":"Consejo Superior de Investigaciones Cient\u00edficas","host_organization_lineage":["https://openalex.org/I134820265"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Art\u00edculo"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.401.5593","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.401.5593","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://mitpress.mit.edu/sites/default/files/titles/content/alife13/978-0-262-31050-5-ch016.pdf","raw_type":"text"},{"id":"pmh:oai:riunet.upv.es:10251/34666","is_oa":true,"landing_page_url":"http://hdl.handle.net/10251/34666","pdf_url":null,"source":{"id":"https://openalex.org/S4306401500","display_name":"RiuNet (Politechnical University of Valencia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I60053951","host_organization_name":"Universitat Polit\u00e8cnica de Val\u00e8ncia","host_organization_lineage":["https://openalex.org/I60053951"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":{"id":"pmh:oai:digital.csic.es:10261/112546","is_oa":true,"landing_page_url":"http://hdl.handle.net/10261/112546","pdf_url":"https://digital.csic.es/bitstream/10261/112546/1/evolved_modular_epistasis_Valverde.pdf","source":{"id":"https://openalex.org/S4306401639","display_name":"DIGITAL.CSIC (Spanish National Research Council (CSIC))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134820265","host_organization_name":"Consejo Superior de Investigaciones Cient\u00edficas","host_organization_lineage":["https://openalex.org/I134820265"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Art\u00edculo"},"sustainable_development_goals":[{"display_name":"Life in Land","score":0.75,"id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G497760777","display_name":null,"funder_award_id":"BFU2009-06993","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"}],"funders":[{"id":"https://openalex.org/F4320306183","display_name":"James S. McDonnell Foundation","ror":"https://ror.org/03dy4aq19"},{"id":"https://openalex.org/F4320306193","display_name":"John Templeton Foundation","ror":"https://ror.org/035tnyy05"},{"id":"https://openalex.org/F4320312777","display_name":"Santa Fe Institute","ror":"https://ror.org/01arysc35"},{"id":"https://openalex.org/F4320322930","display_name":"Ministerio de Ciencia e Innovaci\u00f3n","ror":"https://ror.org/034900433"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2137938313.pdf"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1602132379","https://openalex.org/W1982907870","https://openalex.org/W2008609077","https://openalex.org/W2022111336","https://openalex.org/W2032273054","https://openalex.org/W2044317391","https://openalex.org/W2062185406","https://openalex.org/W2073881372","https://openalex.org/W2078804374","https://openalex.org/W2087004016","https://openalex.org/W2095293504","https://openalex.org/W2105291362","https://openalex.org/W2108672490","https://openalex.org/W2133102806","https://openalex.org/W2140373545","https://openalex.org/W2147276070","https://openalex.org/W2155810228","https://openalex.org/W2160778958","https://openalex.org/W2161297153","https://openalex.org/W3186293301"],"related_works":["https://openalex.org/W2082860237","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W1641042124","https://openalex.org/W2013243191","https://openalex.org/W2151865869","https://openalex.org/W2117258802","https://openalex.org/W2051339581","https://openalex.org/W4234157524"],"abstract_inverted_index":{"How":[0],"does":[1],"complexity":[2],"evolve":[3],"in":[4,85,132],"artificial":[5],"and":[6,47,63,106],"natural":[7],"systems?":[8],"A":[9],"central":[10],"concept":[11],"within":[12],"genetic":[13],"systems":[14],"is":[15,34,100],"epistasis,":[16],"namely":[17],"the":[18,21,50,53,58,76,104,119,146],"modulation":[19],"of":[20,23,43,52,61,79,108,110,123,129],"effects":[22],"a":[24,91,138],"given":[25],"gene":[26],"by":[27],"one":[28],"or":[29],"several":[30],"other":[31],"genes.":[32],"Epistasis":[33],"known":[35],"to":[36,49,68,95,102,160],"have":[37],"an":[38],"impact":[39],"on":[40],"many":[41],"features":[42],"organisms,":[44],"from":[45],"recombination":[46],"sex":[48],"ruggedness":[51],"underlying":[54],"fitness":[55],"landscapes.":[56],"However,":[57],"multi-scale":[59],"nature":[60,122],"evolution":[62],"organisms":[64],"makes":[65],"often":[66],"difficult":[67],"properly":[69],"characterize":[70],"epistatic":[71,80,97,111,148],"interactions.":[72],"Here":[73],"we":[74],"study":[75],"hierarchical":[77],"organization":[78,156],"interactions":[81,98],"between":[82],"machine":[83],"instructions":[84],"evolved":[86],"digital":[87],"organisms.":[88],"We":[89,126,150],"present":[90],"new":[92],"quantitative":[93],"approach":[94],"discover":[96],"that":[99,153],"able":[101],"capture":[103],"presence":[105],"role":[107],"groups":[109],"modules.":[112],"Therefore,":[113],"it":[114],"thus":[115],"takes":[116],"into":[117],"account":[118],"intrinsic":[120],"nested":[121],"individual":[124],"complexity.":[125],"found":[127,152],"evidences":[128],"modular":[130,155],"epistasis":[131,142],"avidians,":[133],"with":[134],"some":[135],"modules":[136],"having":[137],"tendency":[139],"toward":[140],"antagonistic":[141],"while":[143],"others":[144],"show":[145],"opposite":[147],"sign.":[149],"also":[151],"this":[154],"was":[157],"positively":[158],"correlated":[159],"organismal":[161],"robustness.":[162]},"counts_by_year":[{"year":2016,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
