{"id":"https://openalex.org/W4289378910","doi":"https://doi.org/10.7287/peerj.preprints.27249v3","title":"The MODES toolbox: Measurements of Open-ended Dynamics in Evolving Systems","display_name":"The MODES toolbox: Measurements of Open-ended Dynamics in Evolving Systems","publication_year":2018,"publication_date":"2018-10-16","ids":{"openalex":"https://openalex.org/W4289378910","doi":"https://doi.org/10.7287/peerj.preprints.27249v3"},"language":"en","primary_location":{"id":"doi:10.7287/peerj.preprints.27249v3","is_oa":true,"landing_page_url":"https://doi.org/10.7287/peerj.preprints.27249v3","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"posted-content"},"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.7287/peerj.preprints.27249v3","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039490105","display_name":"Emily Dolson","orcid":"https://orcid.org/0000-0001-8616-4898"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]},{"id":"https://openalex.org/I4210111179","display_name":"Michigan United","ror":"https://ror.org/0291ys696","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210111179"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Emily L Dolson","raw_affiliation_strings":["BEACON Center for the Study of Evolution in Action, Michigan State University, East Lansing, Michigan, United States","Department of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, United States","Ecology, Evolutionary Biology, and Behavior Program, Michigan State University, East Lansing, Michigan, United States"],"affiliations":[{"raw_affiliation_string":"BEACON Center for the Study of Evolution in Action, Michigan State University, East Lansing, Michigan, United States","institution_ids":["https://openalex.org/I87216513","https://openalex.org/I4210111179"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, United States","institution_ids":["https://openalex.org/I87216513","https://openalex.org/I4210111179"]},{"raw_affiliation_string":"Ecology, Evolutionary Biology, and Behavior Program, Michigan State University, East Lansing, Michigan, United States","institution_ids":["https://openalex.org/I87216513","https://openalex.org/I4210111179"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070798686","display_name":"Anya E. Vostinar","orcid":"https://orcid.org/0000-0001-7216-5283"},"institutions":[{"id":"https://openalex.org/I173288447","display_name":"Grinnell College","ror":"https://ror.org/04tmmky42","country_code":"US","type":"education","lineage":["https://openalex.org/I173288447"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anya E Vostinar","raw_affiliation_strings":["Department of Computer Science, Grinnell College, Grinnell, Iowa, United States"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Grinnell College, Grinnell, Iowa, United States","institution_ids":["https://openalex.org/I173288447"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007417194","display_name":"Michael J. Wiser","orcid":"https://orcid.org/0000-0003-1686-9272"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]},{"id":"https://openalex.org/I4210111179","display_name":"Michigan United","ror":"https://ror.org/0291ys696","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210111179"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael J Wiser","raw_affiliation_strings":["BEACON Center for the Study of Evolution in Action, Michigan State University, East Lansing, Michigan, United States","Ecology, Evolutionary Biology, and Behavior Program, Michigan State University, East Lansing, Michigan, United States"],"affiliations":[{"raw_affiliation_string":"BEACON Center for the Study of Evolution in Action, Michigan State University, East Lansing, Michigan, United States","institution_ids":["https://openalex.org/I87216513","https://openalex.org/I4210111179"]},{"raw_affiliation_string":"Ecology, Evolutionary Biology, and Behavior Program, Michigan State University, East Lansing, Michigan, United States","institution_ids":["https://openalex.org/I87216513","https://openalex.org/I4210111179"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026353119","display_name":"Charles Ofria","orcid":"https://orcid.org/0000-0003-2924-1732"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]},{"id":"https://openalex.org/I4210111179","display_name":"Michigan United","ror":"https://ror.org/0291ys696","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210111179"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Charles A Ofria","raw_affiliation_strings":["BEACON Center for the Study of Evolution in Action, Michigan State University, East Lansing, Michigan, United States","Department of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, United States","Ecology, Evolutionary Biology, and Behavior Program, Michigan State University, East Lansing, Michigan, United States"],"affiliations":[{"raw_affiliation_string":"BEACON Center for the Study of Evolution in Action, Michigan State University, East Lansing, Michigan, United States","institution_ids":["https://openalex.org/I87216513","https://openalex.org/I4210111179"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, United States","institution_ids":["https://openalex.org/I87216513","https://openalex.org/I4210111179"]},{"raw_affiliation_string":"Ecology, Evolutionary Biology, and Behavior Program, Michigan State University, East Lansing, Michigan, United States","institution_ids":["https://openalex.org/I87216513","https://openalex.org/I4210111179"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5039490105"],"corresponding_institution_ids":["https://openalex.org/I87216513","https://openalex.org/I4210111179"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.56756219,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11252","display_name":"Evolutionary Game Theory and Cooperation","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11252","display_name":"Evolutionary Game Theory and Cooperation","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/toolbox","display_name":"Toolbox","score":0.77435302734375},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7528549432754517},{"id":"https://openalex.org/keywords/novelty","display_name":"Novelty","score":0.7002099752426147},{"id":"https://openalex.org/keywords/implementation","display_name":"Implementation","score":0.6827212572097778},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5425212979316711},{"id":"https://openalex.org/keywords/measure","display_name":"Measure (data warehouse)","score":0.5238913297653198},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5012030601501465},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.43703120946884155},{"id":"https://openalex.org/keywords/evolutionary-algorithm","display_name":"Evolutionary algorithm","score":0.4311516582965851},{"id":"https://openalex.org/keywords/evolutionary-computation","display_name":"Evolutionary computation","score":0.4304940700531006},{"id":"https://openalex.org/keywords/artificial-life","display_name":"Artificial life","score":0.41551804542541504},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4042421579360962},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.40202638506889343},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.39872968196868896},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.23155111074447632},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.21392112970352173},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11793085932731628}],"concepts":[{"id":"https://openalex.org/C2777655017","wikidata":"https://www.wikidata.org/wiki/Q1501161","display_name":"Toolbox","level":2,"score":0.77435302734375},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7528549432754517},{"id":"https://openalex.org/C2778738651","wikidata":"https://www.wikidata.org/wiki/Q16546687","display_name":"Novelty","level":2,"score":0.7002099752426147},{"id":"https://openalex.org/C26713055","wikidata":"https://www.wikidata.org/wiki/Q245962","display_name":"Implementation","level":2,"score":0.6827212572097778},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5425212979316711},{"id":"https://openalex.org/C2780009758","wikidata":"https://www.wikidata.org/wiki/Q6804172","display_name":"Measure (data warehouse)","level":2,"score":0.5238913297653198},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5012030601501465},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.43703120946884155},{"id":"https://openalex.org/C159149176","wikidata":"https://www.wikidata.org/wiki/Q14489129","display_name":"Evolutionary algorithm","level":2,"score":0.4311516582965851},{"id":"https://openalex.org/C105902424","wikidata":"https://www.wikidata.org/wiki/Q1197129","display_name":"Evolutionary computation","level":2,"score":0.4304940700531006},{"id":"https://openalex.org/C19273510","wikidata":"https://www.wikidata.org/wiki/Q263847","display_name":"Artificial life","level":2,"score":0.41551804542541504},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4042421579360962},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.40202638506889343},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.39872968196868896},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.23155111074447632},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.21392112970352173},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11793085932731628},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C27206212","wikidata":"https://www.wikidata.org/wiki/Q34178","display_name":"Theology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.7287/peerj.preprints.27249v3","is_oa":true,"landing_page_url":"https://doi.org/10.7287/peerj.preprints.27249v3","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.7287/peerj.preprints.27249v3","is_oa":true,"landing_page_url":"https://doi.org/10.7287/peerj.preprints.27249v3","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"posted-content"},"sustainable_development_goals":[{"display_name":"Responsible consumption and production","score":0.5899999737739563,"id":"https://metadata.un.org/sdg/12"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4297582752","https://openalex.org/W4285805405","https://openalex.org/W85101999","https://openalex.org/W2391924736","https://openalex.org/W3133779647","https://openalex.org/W4291270682","https://openalex.org/W1560122427","https://openalex.org/W2593449396","https://openalex.org/W2780789525","https://openalex.org/W2121903617"],"abstract_inverted_index":{"Building":[0],"more":[1],"open-ended":[2,56,145],"evolutionary":[3,15],"systems":[4,83],"can":[5,87],"simultaneously":[6],"advance":[7],"our":[8,167,197,203,211],"understanding":[9],"of":[10,41,55,144,154],"biology,":[11],"artificial":[12,115],"life,":[13],"and":[14,64,80,135,188,216],"computation.":[16],"In":[17],"order":[18],"to":[19,27,34,46,51,70,75,111,123,125,158,219],"do":[20],"so,":[21],"however,":[22],"we":[23,30,86,97,119,149,173,177],"need":[24],"a":[25,39,48,78,92,152,155],"way":[26],"determine":[28],"when":[29],"are":[31,174,200,214],"moving":[32],"closer":[33],"this":[35,95,121],"goal.":[36],"We":[37,194],"propose":[38],"set":[40],"metrics":[42,73,106,131,168,213],"that":[43,85,107,166,196,210],"allow":[44],"us":[45],"measure":[47,170],"system's":[49,156],"ability":[50],"produce":[52,159],"commonly-agreed-upon":[53],"hallmarks":[54,143,172],"evolution:":[57],"change":[58],"potential,":[59,61,63],"novelty":[60],"complexity":[62],"ecological":[65],"potential.":[66],"Our":[67],"goal":[68],"is":[69],"make":[71,88],"these":[72,105,130,207],"easy":[74,110],"incorporate":[76,112],"into":[77,113],"system,":[79],"comparable":[81],"across":[82],"so":[84],"coherent":[89],"progress":[90],"as":[91,127,136],"field.":[93],"To":[94,164],"end,":[96],"provide":[98],"detailed":[99],"algorithms":[100],"(including":[101],"C++":[102],"implementations)":[103],"for":[104],"should":[108,217],"be":[109],"existing":[114],"life":[116],"systems.":[117,221],"Furthermore,":[118],"expect":[120],"toolbox":[122],"continue":[124],"grow":[126],"researchers":[128],"implement":[129],"in":[132,162],"new":[133],"languages":[134],"the":[137,171,189],"community":[138],"reaches":[139],"consensus":[140],"about":[141,206],"additional":[142],"evolution.":[146],"For":[147],"example,":[148],"would":[150],"welcome":[151],"measurement":[153],"potential":[157],"major":[160],"transitions":[161],"individuality.":[163],"confirm":[165],"accurately":[169],"interested":[175],"in,":[176],"test":[178],"them":[179],"on":[180],"two":[181],"very":[182],"different":[183],"experimental":[184],"systems:":[185],"NK":[186],"Landscapes":[187],"Avida":[190],"Digital":[191],"Evolution":[192],"Platform.":[193],"find":[195],"observed":[198],"results":[199],"consistent":[201],"with":[202],"prior":[204],"knowledge":[205],"systems,":[208],"suggesting":[209],"proposed":[212],"effective":[215],"generalize":[218],"other":[220]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
