{"id":"https://openalex.org/W3201226007","doi":"https://doi.org/10.5821/dissertation-2117-351134","title":"Statistical normalisation of network propagation methods for computational biology","display_name":"Statistical normalisation of network propagation methods for computational biology","publication_year":2020,"publication_date":"2020-07-23","ids":{"openalex":"https://openalex.org/W3201226007","doi":"https://doi.org/10.5821/dissertation-2117-351134","mag":"3201226007"},"language":"en","primary_location":{"id":"doi:10.5821/dissertation-2117-351134","is_oa":true,"landing_page_url":"https://doi.org/10.5821/dissertation-2117-351134","pdf_url":"https://upcommons.upc.edu/bitstream/2117/351134/1/TSPA1de1.pdf","source":null,"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Universitat Polit\u00e8cnica de Catalunya","raw_type":"dissertation"},"type":"dissertation","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://upcommons.upc.edu/bitstream/2117/351134/1/TSPA1de1.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023202274","display_name":"Sergio Picart\u2010Armada","orcid":"https://orcid.org/0000-0002-6426-8204"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Picart Armada, Sergio","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5023202274"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9861000180244446,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9663000106811523,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6092996597290039},{"id":"https://openalex.org/keywords/node","display_name":"Node (physics)","score":0.517379641532898},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.5135753154754639},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4354848861694336},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.40942925214767456},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3893952965736389},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3409528434276581},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3317120671272278},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3301919102668762},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19999909400939941},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.13887342810630798}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6092996597290039},{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.517379641532898},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.5135753154754639},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4354848861694336},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.40942925214767456},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3893952965736389},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3409528434276581},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3317120671272278},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3301919102668762},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19999909400939941},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.13887342810630798},{"id":"https://openalex.org/C66938386","wikidata":"https://www.wikidata.org/wiki/Q633538","display_name":"Structural engineering","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.5821/dissertation-2117-351134","is_oa":true,"landing_page_url":"https://doi.org/10.5821/dissertation-2117-351134","pdf_url":"https://upcommons.upc.edu/bitstream/2117/351134/1/TSPA1de1.pdf","source":null,"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Universitat Polit\u00e8cnica de Catalunya","raw_type":"dissertation"},{"id":"pmh:oai:www.tdx.cat:10803/672381","is_oa":false,"landing_page_url":"http://hdl.handle.net/10803/672381","pdf_url":null,"source":{"id":"https://openalex.org/S4306401111","display_name":"Tesis Doctorals en Xarxa (Consorci de Serveis Universitaris de Catalunya)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210090028","host_organization_name":"Consorci de Serveis Universitaris de Catalunya","host_organization_lineage":["https://openalex.org/I4210090028"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"TDX (Tesis Doctorals en Xarxa)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:upcommons.upc.edu:2117/351134","is_oa":true,"landing_page_url":"https://hdl.handle.net/10803/672381","pdf_url":"https://upcommons.upc.edu/bitstreams/d3c158b0-08dd-40a4-a900-a7498c5e36a6/download","source":{"id":"https://openalex.org/S4210207057","display_name":"QRU Quaderns de Recerca en Urbanisme","issn_l":"2014-9689","issn":["2014-9689","2385-6777"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310322448","host_organization_name":"Q71272178","host_organization_lineage":["https://openalex.org/P4310322448"],"host_organization_lineage_names":["Q71272178"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"TDX (Tesis Doctorals en Xarxa)","raw_type":"Doctoral thesis"}],"best_oa_location":{"id":"doi:10.5821/dissertation-2117-351134","is_oa":true,"landing_page_url":"https://doi.org/10.5821/dissertation-2117-351134","pdf_url":"https://upcommons.upc.edu/bitstream/2117/351134/1/TSPA1de1.pdf","source":null,"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Universitat Polit\u00e8cnica de Catalunya","raw_type":"dissertation"},"sustainable_development_goals":[{"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12","score":0.44999998807907104}],"awards":[{"id":"https://openalex.org/G1258440726","display_name":null,"funder_award_id":"(MINECO","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G1379442001","display_name":null,"funder_award_id":"BFU2014-57466","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G2640468998","display_name":null,"funder_award_id":"DPI2017-89827-R","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G289454021","display_name":null,"funder_award_id":"BFU2014-57466-P","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G4715792684","display_name":null,"funder_award_id":"CIBER","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"},{"id":"https://openalex.org/G5218991717","display_name":null,"funder_award_id":"TEC2014-60337-R","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G5418912364","display_name":null,"funder_award_id":"BFU2014","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G5556984391","display_name":null,"funder_award_id":"(ISCIII","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"},{"id":"https://openalex.org/G622155920","display_name":null,"funder_award_id":"PI2017","funder_id":"https://openalex.org/F4320334923","funder_display_name":"Instituto de Salud Carlos III"},{"id":"https://openalex.org/G7211612906","display_name":null,"funder_award_id":"ISCIII","funder_id":"https://openalex.org/F4320323089","funder_display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red en Bioingenier\u00eda, Biomateriales y Nanomedicina"}],"funders":[{"id":"https://openalex.org/F4320321837","display_name":"Ministerio de Econom\u00eda y Competitividad","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320323089","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red en Bioingenier\u00eda, Biomateriales y Nanomedicina","ror":"https://ror.org/01gm5f004"},{"id":"https://openalex.org/F4320334830","display_name":"Ag\u00e8ncia de Gesti\u00f3 d'Ajuts Universitaris i de Recerca","ror":"https://ror.org/01n4pqe45"},{"id":"https://openalex.org/F4320334923","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3201226007.pdf","grobid_xml":"https://content.openalex.org/works/W3201226007.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2158714033","https://openalex.org/W78967844","https://openalex.org/W3213185671","https://openalex.org/W4210989272","https://openalex.org/W4206945140","https://openalex.org/W4386628104","https://openalex.org/W2509687359","https://openalex.org/W4212865750","https://openalex.org/W2362023034","https://openalex.org/W2947028852"],"abstract_inverted_index":{"The":[0,303,357,427,439,462,477,545],"advent":[1],"of":[2,13,17,24,56,77,80,95,108,135,177,184,201,210,216,242,284,288,300,319,326,350,375,411,441,484,494,537],"high-throughput":[3],"technologies":[4],"and":[5,42,58,72,147,180,229,247,280,294,322,348,353,406,437,456,466,543],"their":[6,269],"decreasing":[7],"cost":[8],"have":[9,258],"fostered":[10],"the":[11,28,49,54,75,78,81,93,132,171,175,178,181,202,208,214,237,240,243,250,278,285,289,297,301,309,320,323,327,341,346,372,395,398,409,434,454,459,467,473,482,492,495,517,549,561],"creation":[12],"a":[14,62,96,101,199,388,413,420,534,553,733,809,1173,1255,1286,1347],"rich":[15],"ecosystem":[16],"public":[18],"database":[19],"resources.":[20],"In":[21,86,236],"an":[22,332,384],"era":[23],"affordable":[25],"data":[26,35,64,228,321,512],"acquisition,":[27],"core":[29],"challenge":[30],"has":[31,127,552],"shifted":[32],"to":[33,39,66,149,151,164,189,249,296,393,397,418,433,523],"improve":[34],"interpretation,":[36],"in":[37,53,83,121,155,204,219,472,488,533],"order":[38],"understand":[40],"normal":[41],"disease":[43],"states.":[44],"To":[45,335],"that":[46,131,336,548],"end,":[47,337],"leveraging":[48],"current":[50],"contextual":[51],"knowledge":[52,389,463],"form":[55],"annotations":[57],"biological":[59,136,399],"networks":[60,137],"is":[61,245,329,369,391,416,430,444,481,500,513,531],"powerful":[63],"amplifier":[65],"elucidate":[67],"novel":[68],"hypotheses.":[69],"Label":[70],"propagation":[71,91,140,414,468],"diffusion":[73,264,290,355],"are":[74,145,187,261,292,470,567],"linchpin":[76],"state":[79],"art":[82],"network":[84,251,435,464],"algorithms.":[85,141],"its":[87,109,185,273],"simplest":[88],"form,":[89],"label":[90],"predicts":[92],"labels":[94],"given":[97],"node":[98],"(for":[99],"instance":[100],"gene,":[102],"protein":[103,518,562],"or":[104],"metabolite)":[105],"using":[106],"those":[107],"interactors.":[110],"More":[111],"elaborated":[112],"approaches":[113],"propagate":[114],"beyond":[115],"direct":[116],"interactors,":[117],"with":[118,207,266,313,361],"robust":[119],"performance":[120,505,524,541],"many":[122],"computational":[123,221,376],"biology":[124,222],"domains.":[125],"It":[126],"been":[128],"pointed":[129],"out":[130],"topological":[133,172],"structure":[134],"can":[138,305],"bias":[139,179,203,244,310],"Poorly":[142],"known":[143,515],"entities":[144],"overlooked":[146],"harder":[148],"link":[150],"experimental":[152],"findings,":[153,450],"which":[154,256,521],"turn":[156],"keeps":[157],"them":[158],"barely":[159],"annotated.":[160],"Some":[161],"efforts":[162],"try":[163],"break":[165],"this":[166,338,442,529],"circularity":[167],"by":[168,371],"statistically":[169],"normalising":[170],"bias,":[173],"but":[174,451,555],"properties":[176,325],"real":[182,837,1307],"benefit":[183],"removal":[186],"yet":[188],"be":[190,306],"carefully":[191],"examined.":[192],"This":[193,367],"thesis":[194,339],"covers":[195],"two":[196],"blocks.":[197],"First,":[198],"characterisation":[200],"diffusion-based":[205],"algorithms,":[206,539],"implementation":[209],"statistical":[211,282,428,496,550],"normalisations.":[212],"Second,":[213],"application":[215,480],"such":[217],"normalisation":[218,304,429,551],"classical":[220],"problems:":[223],"pathway":[224,362,449],"analysis":[225,363],"for":[226,233,331,364,378,424,507,560,571],"metabolomics":[227,365],"target":[230],"gene":[231,486],"prediction":[232,483],"drug":[234,509,572],"development.":[235,510],"first":[238,279],"block,":[239],"presence":[241],"confirmed":[246],"linked":[248,295],"topology,":[252],"albeit":[253],"dependent":[254],"on":[255,268,277],"nodes":[257,312],"labels.":[259,315],"Equivalences":[260],"proven":[262,445],"between":[263],"processes":[265],"variations":[267],"definitions,":[270],"thus":[271],"easing":[272,345],"choice.":[274,334],"Closed":[275],"forms":[276],"second":[281,358,478],"moments":[283],"null":[286],"distributions":[287],"scores":[291],"provided":[293],"spectral":[298],"features":[299],"network.":[302],"detrimental":[307],"if":[308,526],"favours":[311],"positive":[314],"An":[316],"ad-hoc":[317],"study":[318],"expected":[324],"findings":[328],"recommended":[330],"optimal":[333],"contributes":[340],"diffuStats":[342],"software":[343,475,876,1047,1240],"package,":[344],"computation":[347],"benchmark":[349],"several":[351],"normalised":[352],"unnormalised":[354],"scores.":[356],"block":[359],"starts":[360],"data.":[366],"choice":[368],"driven":[370],"relative":[373],"lack":[374],"solutions":[377],"metabolomics,":[379],"whose":[380],"output":[381],"still":[382,568],"requires":[383],"effortful":[385],"interpretation.":[386],"Here,":[387,528],"graph":[390],"conceived":[392],"connect":[394],"metabolites":[396,410,455],"pathways":[400],"through":[401],"intermediate":[402],"entities,":[403],"like":[404],"reactions":[405,457],"enzymes.":[407],"Given":[408],"interest,":[412],"process":[415],"run":[417],"prioritise":[419],"relevant":[421],"sub-network,":[422],"suitable":[423],"manual":[425],"inspection.":[426],"required":[431],"due":[432],"design":[436],"properties.":[438],"usefulness":[440],"approach":[443],"not":[446],"only":[447],"regarding":[448],"also":[452],"examining":[453],"within":[458],"suggested":[460],"sub-networks.":[461],"construction":[465],"algorithm":[469],"distributed":[471],"FELLA":[474,1241,1259],"package.":[476],"practical":[479,508],"plausible":[485],"targets":[487],"disease.":[489],"Besides":[490],"benchmarking":[491],"effect":[493,530],"normalisation,":[497],"particular":[498,1023],"care":[499],"put":[501],"into":[502],"obtaining":[503],"meaningful":[504],"estimates":[506],"Target":[511],"usually":[514],"at":[516],"complex":[519,563],"level,":[520],"leads":[522],"over-estimation":[525],"ignored.":[527],"corrected":[532],"varied":[535],"comparison":[536],"prioritisation":[538],"networks,":[540],"metrics":[542],"diseases.":[544],"results":[546],"support":[547],"small":[554],"negative":[556],"impact.":[557],"After":[558],"correcting":[559],"structure,":[564],"network-based":[565],"algorithms":[566],"deemed":[569],"useful":[570],"discovery.":[573],"La":[574,631,818,1153,1203,1237,1337],"aparici\u00f3n":[575],"de":[576,579,586,590,592,598,608,617,626,629,633,636,666,673,677,686,698,706,715,746,751,762,767,772,778,780,788,803,838,848,857,865,869,881,887,894,899,905,913,921,949,952,956,976,991,1003,1020,1025,1031,1068,1078,1086,1095,1101,1105,1108,1110,1114,1121,1134,1144,1155,1161,1164,1175,1190,1201,1214,1223,1230,1245,1248,1253,1262,1265,1279,1281,1288,1292,1296,1312,1314,1318,1327,1331,1335,1339,1366,1369,1373,1378,1387,1392,1415,1423,1426,1431],"tecnolog\u00edas":[577],"experimentales":[578,648],"alto":[580],"rendimiento":[581,1379],"ha":[582,621],"propiciado":[583],"la":[584,602,606,618,624,654,664,769,855,858,867,879,903,940,950,953,964,974,977,992,1011,1029,1058,1083,1142,1159,1209,1215,1221,1229,1243,1246,1256,1297,1388,1393,1400],"creaci\u00f3n":[585,1160],"un":[587,842,1046,1050,1115,1149,1310,1359],"rico":[588],"entorno":[589],"bases":[591,672],"datos":[593,609,674,898,1146,1317],"que":[594,652,719,721,725,768,782,961,1010,1034,1053,1166,1362,1399],"aglomeran":[595],"todo":[596],"tipo":[597],"anotaciones":[599,678],"moleculares.":[600],"Dada":[601],"creciente":[603],"facilidad":[604],"para":[605,695,748,897,1136,1192,1283],"adquisici\u00f3n":[607],"en":[610,641,645,670,675,684,744,797,806,862,884,891,902,910,959,973,1049,1080,1267,1303,1309,1344,1395,1406,1411,1420],"varios":[611],"niveles":[612],"moleculares,":[613],"el":[614,650,713,801,835,892,911,935,1071,1076,1251,1277,1294,1305,1351,1364,1385,1407,1421],"reto":[615],"central":[616],"biolog\u00eda":[619,888],"computacional":[620],"virado":[622],"hacia":[623],"interpretaci\u00f3n":[625,1143],"dicho":[627,826],"volumen":[628],"datos.":[630],"comprensi\u00f3n":[632],"los":[634,642,646,703,776,783,807,863,957,960,988,1032,1087,1145,1168,1199,1231,1367,1413],"procesos":[635,1124],"normalidad":[637],"y":[638,679,682,708,736,834,872,901,944,994,1016,1024,1056,1063,1117,1182,1211,1233,1250,1270,1383,1391,1409],"enfermedad":[639,1394],"involucrados":[640],"cambios":[643],"observados":[644],"estudios":[647,822,1088,1268,1340],"es":[649,661,712,1009,1158,1206],"motor":[651],"expande":[653],"frontera":[655],"del":[656,832,860,931,942,1239],"conocimiento":[657,667,697,815,1165,1249],"humano.":[658],"Para":[659,1038],"ello,":[660,1039],"fundamental":[662],"aprovechar":[663],"herencia":[665],"previo,":[668],"recogido":[669],"las":[671,699,722,741,760,773,829,1000,1004,1026,1171,1176,1194,1212,1224,1234,1428],"forma":[676,781],"redes":[680,700,774,1133,1289],"biol\u00f3gicas,":[681],"minarlo":[683],"busca":[685],"nuevos":[687],"patrones":[688],"e":[689],"hip\u00f3tesis.":[690],"Los":[691,792,1316],"algoritmos":[692,739,777,864,1189,1372],"m\u00e1s":[693,731,844,1138,1196],"extendidos":[694],"extraer":[696],"biol\u00f3gicas":[701,724,896],"son":[702,730,917],"denominados":[704],"m\u00e9todos":[705,1414],"propagaci\u00f3n":[707,922,1059,1191,1374,1416],"difusi\u00f3n.":[709],"Su":[710],"trasfondo":[711],"principio":[714],"culpa":[716],"por":[717,924,1091,1380],"asociaci\u00f3n,":[718],"postula":[720],"entidades":[723,1177,1195],"mantienen":[726],"relaci\u00f3n":[727],"o":[728,757,1066,1123,1333],"interacci\u00f3n":[729],"propensas":[732],"compartir":[734],"funciones":[735],"propiedades.":[737],"Dichos":[738],"aprovechan":[740],"interacciones":[742],"conocidas,":[743],"formato":[745],"red,":[747,954],"predecir":[749],"propiedades":[750,761,830,1001],"nodos":[752,784,793,958,1033],"(por":[753],"ejemplo,":[754],"genes,":[755],"prote\u00ednas":[756],"metabolitos)":[758],"usando":[759],"sus":[763],"interactores.":[764],"Existe":[765],"evidencia":[766],"estructura":[770,951,1210],"topol\u00f3gica":[771],"sesga":[775],"propagaci\u00f3n,":[779,866,978],"mejor":[785],"descritos":[786],"gozan":[787],"una":[789,997,1106,1119,1162],"ventaja":[790],"sistem\u00e1tica.":[791],"menos":[794],"conocidos":[795],"quedan":[796],"desventaja,":[798],"se":[799,824,938,962,995,1074,1187,1275,1300,1322,1357],"entorpece":[800],"descubrimiento":[802],"su":[804,810,873,945,981,1017,1093,1381,1432],"implicaci\u00f3n":[805],"experimentos,":[808],"vez":[811],"perpetuando":[812],"nuestro":[813],"pobre":[814],"sobre":[816,987,1028,1350],"ellos.":[817,1129],"literatura":[819],"ofrece":[820],"algunos":[821],"donde":[823],"normaliza":[825],"efecto,":[827],"pero":[828,1141],"intr\u00ednsecas":[831],"sesgo":[833,861,932,943],"beneficio":[836],"dicha":[839,882,1185],"normalizaci\u00f3n":[840,883,1012,1204,1298,1401],"requiere":[841],"estudio":[843,1360],"detallado.":[845],"El":[846,1099],"objeto":[847],"esta":[849,1040,1156,1355],"tesis":[850,1041,1157,1356],"tiene":[851,1343,1403],"dos":[852],"vertientes.":[853],"Primero,":[854],"caracterizaci\u00f3n":[856],"estad\u00edstica":[859,1205,1402],"concepci\u00f3n":[868],"normalizaciones":[870],"estad\u00edsticas":[871],"distribuci\u00f3n":[874],"como":[875,907,1043,1180],"cient\u00edfico.":[877],"Segundo,":[878],"aplicaci\u00f3n":[880,1266],"problemas":[885,916],"cl\u00e1sicos":[886],"computacional.":[889],"Concretamente,":[890],"an\u00e1lisis":[893,1077,1100],"v\u00edas":[895,1079,1102,1122,1172,1225],"metabol\u00f3mica":[900,1081],"predicci\u00f3n":[904,1280],"genes":[906,1282],"dianas":[908,1284,1319],"terap\u00e9uticas":[909,1285,1320],"desarrollo":[912,1313,1422],"f\u00e1rmacos.":[914,1315],"Ambos":[915],"abordables":[918],"mediante":[919],"t\u00e9cnicas":[920],"y,":[923,1090],"lo":[925,1342],"tanto,":[926],"potencialmente":[927],"sensibles":[928],"al":[929,1325,1330],"efecto":[930,1295,1365,1405],"topol\u00f3gico.":[933],"En":[934,1070,1354],"primer":[936],"bloque,":[937,1073],"corrobora":[939],"existencia":[941],"dependencia":[946],"no":[947,1013,1219,1321,1341],"s\u00f3lo":[948,1220],"sino":[955,1228,1329],"define":[963],"propagaci\u00f3n.":[965],"Se":[966,983,1217,1397],"demuestran":[967],"equivalencias":[968],"matem\u00e1ticas":[969],"entre":[970],"ciertas":[971,1061],"variaciones":[972],"definici\u00f3n":[975],"facilitando":[979],"as\u00ed":[980],"elecci\u00f3n.":[982],"proporcionan":[984],"expresiones":[985],"cerradas":[986],"momentos":[989],"estad\u00edsticos":[990],"difusi\u00f3n":[993,1254],"halla":[996],"conexi\u00f3n":[998],"con":[999,1060,1064,1128,1170,1198,1375],"espectrales":[1002],"redes.":[1005],"Un":[1006],"punto":[1007],"importante":[1008],"siempre":[1014],"ayuda,":[1015],"aplicabilidad":[1018],"depender\u00e1":[1019],"cada":[1021],"caso":[1022],"hip\u00f3tesis":[1027],"topolog\u00eda":[1030],"deben":[1035],"ser":[1036],"descubiertos.":[1037],"deja":[1042],"resultado":[1044],"diffuStats,":[1045],"disponible":[1048],"repositorio":[1051],"p\u00falico,":[1052],"permite":[1054],"calcular":[1055],"comparar":[1057],"variantes,":[1062],"presencia":[1065],"ausencia":[1067],"normalizaci\u00f3n.":[1069],"segundo":[1072],"escoge":[1075],"dada":[1082,1208],"relativa":[1084],"juventud":[1085],"metabol\u00f3micos":[1089],"ende,":[1092],"falta":[1094],"herramientas":[1096],"inform\u00e1ticas":[1097],"dedicadas.":[1098],"cl\u00e1sico":[1103],"parte":[1104],"lista":[1107,1120],"metabolitos":[1109,1135,1169,1200,1232],"inter\u00e9s,":[1111],"normalmente":[1112],"procedentes":[1113],"estudio,":[1116],"reporta":[1118],"metab\u00f3licos":[1125],"estad\u00edsticamente":[1126],"relacionados":[1127],"Algunas":[1130],"variantes":[1131],"usan":[1132],"dar":[1137],"contexto":[1139],"biol\u00f3gico,":[1140],"sigue":[1147],"requiriendo":[1148],"extenso":[1150],"esfuerzo":[1151],"manual.":[1152],"aportaci\u00f3n":[1154],"red":[1163,1186,1247,1389],"relaciona":[1167],"trav\u00e9s":[1174,1287],"intermedias":[1178],"anotadas,":[1179],"reacciones":[1181,1235],"enzimas.":[1183],"Sobre":[1184],"aplican":[1188],"identificar":[1193],"relacionadas":[1197],"inter\u00e9s.":[1202],"necesaria,":[1207],"caracter\u00edsticas":[1213],"red.":[1216],"demuestra":[1218,1398],"coherencia":[1222],"metab\u00f3licas":[1226],"propuestas,":[1227],"priorizadas.":[1236],"publicaci\u00f3n":[1238],"proporciona":[1242],"construcci\u00f3n":[1244],"algoritmo":[1252],"comunidad":[1257],"cient\u00edfica.":[1258],"va":[1260],"acompa\u00f1ado":[1261],"seis":[1263],"casos":[1264],"humanos":[1269],"animales.":[1271],"Por":[1272],"otro":[1273],"lado,":[1274],"aborda":[1276],"problema":[1278],"biol\u00f3gicas.":[1290],"Adem\u00e1s":[1291],"probar":[1293],"estad\u00edstica,":[1299],"pone":[1301],"\u00e9nfasis":[1302],"estimar":[1304],"desempe\u00f1o":[1306,1352,1408],"esperado":[1308],"escenario":[1311],"suelen":[1323],"conocer":[1324],"nivel":[1326],"prote\u00edna":[1328],"complejo":[1332],"familia":[1334],"prote\u00ednas.":[1336],"mayor\u00eda":[1338],"cuenta,":[1345],"llegando":[1346],"estimaciones":[1348,1429],"optimistas":[1349,1430],"esperado.":[1353],"propone":[1358],"exhaustivo":[1361],"corrige":[1363],"complejos":[1368],"prote\u00ednas,":[1370],"compara":[1371],"distintas":[1376],"m\u00e9tricas":[1377],"informatividad":[1382],"explora":[1384],"rol":[1386],"biol\u00f3gica":[1390],"cuesti\u00f3n.":[1396],"poco":[1404],"que,":[1410],"general,":[1412],"siguen":[1417],"siendo":[1418],"\u00fatiles":[1419],"f\u00e1rmacos":[1424],"despu\u00e9s":[1425],"corregir":[1427],"rendimiento.":[1433]},"counts_by_year":[],"updated_date":"2026-04-11T08:14:18.477133","created_date":"2021-09-27T00:00:00"}
