{"id":"https://openalex.org/W4404213204","doi":"https://doi.org/10.56553/popets-2025-0014","title":"Privacy-preserving Multiple Sequence Alignment Scheme for Long Gene Sequence","display_name":"Privacy-preserving Multiple Sequence Alignment Scheme for Long Gene Sequence","publication_year":2024,"publication_date":"2024-11-10","ids":{"openalex":"https://openalex.org/W4404213204","doi":"https://doi.org/10.56553/popets-2025-0014"},"language":"en","primary_location":{"id":"doi:10.56553/popets-2025-0014","is_oa":true,"landing_page_url":"https://doi.org/10.56553/popets-2025-0014","pdf_url":"https://petsymposium.org/popets/2025/popets-2025-0014.pdf","source":{"id":"https://openalex.org/S4210183172","display_name":"Proceedings on Privacy Enhancing Technologies","issn_l":"2299-0984","issn":["2299-0984"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320322","host_organization_name":"De Gruyter Open","host_organization_lineage":["https://openalex.org/P4310320322","https://openalex.org/P4310313990"],"host_organization_lineage_names":["De Gruyter Open","De Gruyter"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings on Privacy Enhancing Technologies","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://petsymposium.org/popets/2025/popets-2025-0014.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044622318","display_name":"Yatong Jiang","orcid":"https://orcid.org/0000-0003-3438-6442"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yatong Jiang","raw_affiliation_strings":["Beihang University"],"affiliations":[{"raw_affiliation_string":"Beihang University","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039586121","display_name":"Tao Shang","orcid":"https://orcid.org/0000-0003-2369-1521"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Shang","raw_affiliation_strings":["Beihang University"],"affiliations":[{"raw_affiliation_string":"Beihang University","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100425107","display_name":"Jianwei Liu","orcid":"https://orcid.org/0000-0003-2965-3518"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianwei Liu","raw_affiliation_strings":["Beihang University"],"affiliations":[{"raw_affiliation_string":"Beihang University","institution_ids":["https://openalex.org/I82880672"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5044622318"],"corresponding_institution_ids":["https://openalex.org/I82880672"],"apc_list":null,"apc_paid":null,"fwci":0.2744,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.61834138,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"2025","issue":"1","first_page":"236","last_page":"249"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.7289000153541565,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.7289000153541565,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.6944000124931335,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.6653000116348267,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.7521275877952576},{"id":"https://openalex.org/keywords/scheme","display_name":"Scheme (mathematics)","score":0.6221226453781128},{"id":"https://openalex.org/keywords/alignment-free-sequence-analysis","display_name":"Alignment-free sequence analysis","score":0.6024341583251953},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5380598306655884},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.49945807456970215},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.4902661144733429},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.4569582939147949},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4445275664329529},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.40697982907295227},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.31631606817245483},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.2332477569580078},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11336266994476318}],"concepts":[{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.7521275877952576},{"id":"https://openalex.org/C77618280","wikidata":"https://www.wikidata.org/wiki/Q1155772","display_name":"Scheme (mathematics)","level":2,"score":0.6221226453781128},{"id":"https://openalex.org/C180384323","wikidata":"https://www.wikidata.org/wiki/Q16335137","display_name":"Alignment-free sequence analysis","level":5,"score":0.6024341583251953},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5380598306655884},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.49945807456970215},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.4902661144733429},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.4569582939147949},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4445275664329529},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40697982907295227},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.31631606817245483},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.2332477569580078},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11336266994476318},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.56553/popets-2025-0014","is_oa":true,"landing_page_url":"https://doi.org/10.56553/popets-2025-0014","pdf_url":"https://petsymposium.org/popets/2025/popets-2025-0014.pdf","source":{"id":"https://openalex.org/S4210183172","display_name":"Proceedings on Privacy Enhancing Technologies","issn_l":"2299-0984","issn":["2299-0984"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320322","host_organization_name":"De Gruyter Open","host_organization_lineage":["https://openalex.org/P4310320322","https://openalex.org/P4310313990"],"host_organization_lineage_names":["De Gruyter Open","De Gruyter"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings on Privacy Enhancing Technologies","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.56553/popets-2025-0014","is_oa":true,"landing_page_url":"https://doi.org/10.56553/popets-2025-0014","pdf_url":"https://petsymposium.org/popets/2025/popets-2025-0014.pdf","source":{"id":"https://openalex.org/S4210183172","display_name":"Proceedings on Privacy Enhancing Technologies","issn_l":"2299-0984","issn":["2299-0984"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320322","host_organization_name":"De Gruyter Open","host_organization_lineage":["https://openalex.org/P4310320322","https://openalex.org/P4310313990"],"host_organization_lineage_names":["De Gruyter Open","De Gruyter"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings on Privacy Enhancing Technologies","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4000000059604645,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5753357002","display_name":null,"funder_award_id":"61971021","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4404213204.pdf","grobid_xml":"https://content.openalex.org/works/W4404213204.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2051969447","https://openalex.org/W2133116680","https://openalex.org/W2111937814","https://openalex.org/W2141411672","https://openalex.org/W2091678889","https://openalex.org/W1482324242","https://openalex.org/W187239587","https://openalex.org/W88386512","https://openalex.org/W2730968108","https://openalex.org/W4386770652"],"abstract_inverted_index":{"Gene":[0],"Multiple":[1],"Sequence":[2],"Alignment":[3],"is":[4],"crucial":[5],"for":[6,13,61,80,93,106,144],"genomic":[7,21,35],"data":[8,22],"analysis,":[9],"forming":[10],"the":[11,30],"basis":[12],"studying":[14],"its":[15],"biological":[16],"significance.":[17],"The":[18,115],"digitization":[19],"of":[20,34,46,118],"allows":[23],"collaborative":[24],"analysis":[25],"on":[26,84],"cloud":[27],"platforms,":[28],"improving":[29],"efficiency":[31,56,129],"and":[32,55,102,123,140],"precision":[33],"research.":[36],"However,":[37],"gene":[38,63,146],"sequences":[39,64,82,96],"contain":[40],"sensitive":[41],"information,":[42],"posing":[43],"a":[44,66,73,91,103,119],"risk":[45],"privacy":[47],"leakage":[48],"with":[49],"unauthorized":[50],"access.":[51],"Balancing":[52],"privacy,":[53],"accuracy,":[54],"in":[57],"multiple":[58,76],"sequence":[59,77],"alignment":[60,78,143],"long":[62,81,95,145],"remains":[65],"challenge.":[67],"In":[68],"this":[69],"paper,":[70],"we":[71],"propose":[72],"distributed":[74,100,120],"privacy-preserving":[75,104,142],"scheme":[79,89,116,137],"based":[83],"secure":[85],"multi-party":[86],"computation.":[87],"Our":[88,135],"includes":[90],"method":[92,105],"segmenting":[94],"to":[97],"achieve":[98],"partially":[99],"computing":[101,121,126],"calculating":[107],"edit":[108],"distance":[109],"among":[110],"subsequences":[111,133],"using":[112],"secret":[113],"sharing.":[114],"consists":[117],"phase":[122],"an":[124],"aggregate":[125],"phase,":[127],"optimizing":[128],"by":[130],"dropping":[131],"repeated":[132],"alignment.":[134],"proposed":[136],"achieves":[138],"accurate":[139],"efficient":[141],"sequences.":[147]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-18T07:56:08.524223","created_date":"2025-10-10T00:00:00"}
