{"id":"https://openalex.org/W2155674485","doi":"https://doi.org/10.5555/1229637.1229669","title":"Programming languages and the biological sciences","display_name":"Programming languages and the biological sciences","publication_year":2007,"publication_date":"2007-04-01","ids":{"openalex":"https://openalex.org/W2155674485","doi":"https://doi.org/10.5555/1229637.1229669","mag":"2155674485"},"language":"en","primary_location":{"id":"mag:2155674485","is_oa":false,"landing_page_url":"https://dl.acm.org/citation.cfm?id=1229637.1229669","pdf_url":null,"source":{"id":"https://openalex.org/S56112914","display_name":"Journal of computing sciences in colleges","issn_l":"1937-4763","issn":["1937-4763","1937-4771"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4361727485","host_organization_name":"Consortium for Computing Sciences in Colleges","host_organization_lineage":["https://openalex.org/P4361727485"],"host_organization_lineage_names":["Consortium for Computing Sciences in Colleges"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":"Journal of computing sciences in colleges","raw_type":null},"type":"article","indexed_in":[],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082784964","display_name":"James W. McGuffee","orcid":"https://orcid.org/0009-0006-1173-6912"},"institutions":[{"id":"https://openalex.org/I9224006","display_name":"St. Edward's University","ror":"https://ror.org/05n545h05","country_code":"US","type":"education","lineage":["https://openalex.org/I9224006"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"James W. McGuffee","raw_affiliation_strings":["St. Edward's University, Austin, TX"],"raw_orcid":"https://orcid.org/0009-0006-1173-6912","affiliations":[{"raw_affiliation_string":"St. Edward's University, Austin, TX","institution_ids":["https://openalex.org/I9224006"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5082784964"],"corresponding_institution_ids":["https://openalex.org/I9224006"],"apc_list":null,"apc_paid":null,"fwci":2.1336,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.90909091,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"22","issue":"4","first_page":"178","last_page":"183"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9883999824523926,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9693999886512756,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.751389741897583},{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.7246280908584595},{"id":"https://openalex.org/keywords/markup-language","display_name":"Markup language","score":0.6624659895896912},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.6262161135673523},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.5291234254837036},{"id":"https://openalex.org/keywords/second-generation-programming-language","display_name":"Second-generation programming language","score":0.519925057888031},{"id":"https://openalex.org/keywords/comparison-of-multi-paradigm-programming-languages","display_name":"Comparison of multi-paradigm programming languages","score":0.4675048291683197},{"id":"https://openalex.org/keywords/point","display_name":"Point (geometry)","score":0.44074663519859314},{"id":"https://openalex.org/keywords/fifth-generation-programming-language","display_name":"Fifth-generation programming language","score":0.42419907450675964},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3317921757698059},{"id":"https://openalex.org/keywords/programming-paradigm","display_name":"Programming paradigm","score":0.32291412353515625},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.22366145253181458},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20327147841453552},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.12082615494728088},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10868081450462341}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.751389741897583},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.7246280908584595},{"id":"https://openalex.org/C45874996","wikidata":"https://www.wikidata.org/wiki/Q37045","display_name":"Markup language","level":3,"score":0.6624659895896912},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.6262161135673523},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.5291234254837036},{"id":"https://openalex.org/C11164408","wikidata":"https://www.wikidata.org/wiki/Q18657800","display_name":"Second-generation programming language","level":4,"score":0.519925057888031},{"id":"https://openalex.org/C74149592","wikidata":"https://www.wikidata.org/wiki/Q762446","display_name":"Comparison of multi-paradigm programming languages","level":5,"score":0.4675048291683197},{"id":"https://openalex.org/C28719098","wikidata":"https://www.wikidata.org/wiki/Q44946","display_name":"Point (geometry)","level":2,"score":0.44074663519859314},{"id":"https://openalex.org/C199305712","wikidata":"https://www.wikidata.org/wiki/Q3205914","display_name":"Fifth-generation programming language","level":3,"score":0.42419907450675964},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3317921757698059},{"id":"https://openalex.org/C34165917","wikidata":"https://www.wikidata.org/wiki/Q188267","display_name":"Programming paradigm","level":2,"score":0.32291412353515625},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.22366145253181458},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20327147841453552},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.12082615494728088},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10868081450462341},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"mag:2155674485","is_oa":false,"landing_page_url":"https://dl.acm.org/citation.cfm?id=1229637.1229669","pdf_url":null,"source":{"id":"https://openalex.org/S56112914","display_name":"Journal of computing sciences in colleges","issn_l":"1937-4763","issn":["1937-4763","1937-4771"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4361727485","host_organization_name":"Consortium for Computing Sciences in Colleges","host_organization_lineage":["https://openalex.org/P4361727485"],"host_organization_lineage_names":["Consortium for Computing Sciences in Colleges"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":"Journal of computing sciences in colleges","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.800000011920929}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W66419302","https://openalex.org/W1513832910","https://openalex.org/W1687651432","https://openalex.org/W1806114922","https://openalex.org/W1975975525","https://openalex.org/W1976235854","https://openalex.org/W1992102171","https://openalex.org/W2028170564","https://openalex.org/W2063822856","https://openalex.org/W2103129584","https://openalex.org/W2138107070","https://openalex.org/W2150934173","https://openalex.org/W2153562609","https://openalex.org/W2342715911"],"related_works":["https://openalex.org/W1559950975","https://openalex.org/W2999858054","https://openalex.org/W1976549329","https://openalex.org/W3035540255","https://openalex.org/W2790694907","https://openalex.org/W2087913695","https://openalex.org/W2143436119","https://openalex.org/W2093120665","https://openalex.org/W1509736014","https://openalex.org/W7865023","https://openalex.org/W1556336697","https://openalex.org/W1579372603","https://openalex.org/W2914547503","https://openalex.org/W2054674141","https://openalex.org/W2012347936","https://openalex.org/W2479964870","https://openalex.org/W2057071210","https://openalex.org/W2058902630","https://openalex.org/W68342221","https://openalex.org/W2744921927"],"abstract_inverted_index":{"This":[0,24],"paper":[1],"presents":[2],"an":[3],"overview":[4],"of":[5],"the":[6,21],"scripting,":[7],"markup,":[8],"and":[9,18,36,45],"general":[10],"purpose":[11],"programming":[12,33,46],"languages":[13,34],"used":[14],"for":[15,29,41],"scientific":[16],"research":[17,44],"discovery":[19],"in":[20,31],"biological":[22],"sciences.":[23],"material":[25],"may":[26],"be":[27],"useful":[28],"inclusion":[30],"a":[32,38],"class":[35],"as":[37],"starting":[39],"point":[40],"undergraduate":[42],"interdisciplinary":[43],"projects.":[47]},"counts_by_year":[{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-28T14:05:53.105641","created_date":"2025-10-10T00:00:00"}
