{"id":"https://openalex.org/W4406180316","doi":"https://doi.org/10.5334/dsj-2025-002","title":"From Bench to Brain: A Metadata-driven Approach to Research Data Management in a Collaborative Neuroscientific Research Center","display_name":"From Bench to Brain: A Metadata-driven Approach to Research Data Management in a Collaborative Neuroscientific Research Center","publication_year":2025,"publication_date":"2025-01-08","ids":{"openalex":"https://openalex.org/W4406180316","doi":"https://doi.org/10.5334/dsj-2025-002"},"language":"en","primary_location":{"id":"doi:10.5334/dsj-2025-002","is_oa":true,"landing_page_url":"https://doi.org/10.5334/dsj-2025-002","pdf_url":"https://datascience.codata.org/articles/1762/files/677f60695d7f2.pdf","source":{"id":"https://openalex.org/S62969111","display_name":"Data Science Journal","issn_l":"1683-1470","issn":["1683-1470"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320511","host_organization_name":"Ubiquity Press","host_organization_lineage":["https://openalex.org/P4310320511"],"host_organization_lineage_names":["Ubiquity Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data Science Journal","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://datascience.codata.org/articles/1762/files/677f60695d7f2.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5115812857","display_name":"Marlene Pacharra","orcid":"https://orcid.org/0000-0001-6602-6746"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Marlene Pacharra","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039807783","display_name":"Tobias Otto","orcid":"https://orcid.org/0000-0002-9994-0910"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tobias Otto","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5078881497","display_name":"N. Winter","orcid":"https://orcid.org/0000-0003-2966-4057"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Nina Olivia Caroline Winter","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5115812857"],"corresponding_institution_ids":[],"apc_list":{"value":350,"currency":"GBP","value_usd":429},"apc_paid":{"value":350,"currency":"GBP","value_usd":429},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00374185,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"24","issue":null,"first_page":"2","last_page":"2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9363999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.7901056408882141},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5807860493659973},{"id":"https://openalex.org/keywords/research-center","display_name":"Research center","score":0.5520871877670288},{"id":"https://openalex.org/keywords/research-data","display_name":"Research data","score":0.5231683850288391},{"id":"https://openalex.org/keywords/center","display_name":"Center (category theory)","score":0.5222033858299255},{"id":"https://openalex.org/keywords/brain-research","display_name":"Brain research","score":0.49745991826057434},{"id":"https://openalex.org/keywords/metadata-management","display_name":"Metadata management","score":0.4934026300907135},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.47232311964035034},{"id":"https://openalex.org/keywords/data-center","display_name":"Data center","score":0.43081581592559814},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.40793538093566895},{"id":"https://openalex.org/keywords/knowledge-management","display_name":"Knowledge management","score":0.40444403886795044},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3477899432182312},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.3127214312553406},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.2920490503311157},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.20567536354064941},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.13832324743270874},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.11984223127365112}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.7901056408882141},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5807860493659973},{"id":"https://openalex.org/C2777532764","wikidata":"https://www.wikidata.org/wiki/Q31855","display_name":"Research center","level":2,"score":0.5520871877670288},{"id":"https://openalex.org/C3020038283","wikidata":"https://www.wikidata.org/wiki/Q42848","display_name":"Research data","level":3,"score":0.5231683850288391},{"id":"https://openalex.org/C2779463800","wikidata":"https://www.wikidata.org/wiki/Q5062222","display_name":"Center (category theory)","level":2,"score":0.5222033858299255},{"id":"https://openalex.org/C2993059035","wikidata":"https://www.wikidata.org/wiki/Q1073","display_name":"Brain research","level":2,"score":0.49745991826057434},{"id":"https://openalex.org/C2779489174","wikidata":"https://www.wikidata.org/wiki/Q6822246","display_name":"Metadata management","level":3,"score":0.4934026300907135},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.47232311964035034},{"id":"https://openalex.org/C153740404","wikidata":"https://www.wikidata.org/wiki/Q671224","display_name":"Data center","level":2,"score":0.43081581592559814},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.40793538093566895},{"id":"https://openalex.org/C56739046","wikidata":"https://www.wikidata.org/wiki/Q192060","display_name":"Knowledge management","level":1,"score":0.40444403886795044},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3477899432182312},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.3127214312553406},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.2920490503311157},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.20567536354064941},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.13832324743270874},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.11984223127365112},{"id":"https://openalex.org/C8010536","wikidata":"https://www.wikidata.org/wiki/Q160398","display_name":"Crystallography","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.5334/dsj-2025-002","is_oa":true,"landing_page_url":"https://doi.org/10.5334/dsj-2025-002","pdf_url":"https://datascience.codata.org/articles/1762/files/677f60695d7f2.pdf","source":{"id":"https://openalex.org/S62969111","display_name":"Data Science Journal","issn_l":"1683-1470","issn":["1683-1470"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320511","host_organization_name":"Ubiquity Press","host_organization_lineage":["https://openalex.org/P4310320511"],"host_organization_lineage_names":["Ubiquity Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data Science Journal","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:b97d4a91013f4a2e809a5a033f53e410","is_oa":true,"landing_page_url":"https://doaj.org/article/b97d4a91013f4a2e809a5a033f53e410","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Data Science Journal, Vol 24, Pp 2-2 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.5334/dsj-2025-002","is_oa":true,"landing_page_url":"https://doi.org/10.5334/dsj-2025-002","pdf_url":"https://datascience.codata.org/articles/1762/files/677f60695d7f2.pdf","source":{"id":"https://openalex.org/S62969111","display_name":"Data Science Journal","issn_l":"1683-1470","issn":["1683-1470"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320511","host_organization_name":"Ubiquity Press","host_organization_lineage":["https://openalex.org/P4310320511"],"host_organization_lineage_names":["Ubiquity Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data Science Journal","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.5299999713897705,"display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G4368869893","display_name":null,"funder_award_id":"Projektnummer 316803389 SFB 1280 (project INF)","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4406180316.pdf","grobid_xml":"https://content.openalex.org/works/W4406180316.grobid-xml"},"referenced_works_count":5,"referenced_works":["https://openalex.org/W2302501749","https://openalex.org/W2934450419","https://openalex.org/W2951103577","https://openalex.org/W4224220494","https://openalex.org/W4319338920"],"related_works":["https://openalex.org/W2995122411","https://openalex.org/W2358053519","https://openalex.org/W2074332992","https://openalex.org/W3196556049","https://openalex.org/W2378297782","https://openalex.org/W3038518845","https://openalex.org/W657952758","https://openalex.org/W2737551685","https://openalex.org/W595741306","https://openalex.org/W4377042485"],"abstract_inverted_index":{"Research":[0,49],"data":[1,37,154,194],"management":[2],"(RDM)":[3],"is":[4,109],"key":[5],"to":[6,115,137,142],"fast":[7],"and":[8,29,36,62,119,134,141,161,195,205,225],"effective":[9],"cooperation":[10],"in":[11,24,176,221],"collaborative":[12,79],"research":[13,80,105,193],"projects,":[14],"especially":[15],"when":[16],"several":[17],"scientific":[18],"disciplines":[19,106,140],"are":[20,26,164,209],"involved.":[21],"Critical":[22],"steps":[23],"RDM":[25,223],"the":[27,43,46,89,103,116,138,143,147,168,202,226],"agreement":[28],"implementation":[30,172],"of":[31,45,92,146,173,201],"common":[32],"standards":[33,122],"for":[34,77,107,125,219],"metadata":[35,84,96,127,151,186,197,203],"storage.":[38],"The":[39,199],"practice":[40],"paper":[41],"outlines":[42],"approach":[44],"interdisciplinary":[47],"Collaborative":[48],"Center":[50],"(CRC)":[51],"1280":[52],"\u2018Extinction":[53],"Learning\u2019":[54],"with":[55,102,192,211],"81":[56],"researchers":[57],"from":[58,155],"biology,":[59],"psychology,":[60],"medicine,":[61],"computational":[63],"neuroscience":[64],"across":[65],"four":[66],"different":[67],"institutions.":[68],"This":[69],"framework":[70],"can":[71],"serve":[72],"as":[73,187],"a":[74],"transferable":[75],"model":[76],"other":[78,222],"initiatives":[81],"lacking":[82],"predefined":[83],"schemas":[85],"or":[86],"repositories.":[87],"Specifically,":[88],"iterative":[90],"process":[91],"agreeing":[93],"on":[94,214],"16":[95],"fields":[97],"that":[98,184,217],"correspond":[99],"most":[100],"highly":[101],"involved":[104],"collaboration":[108],"discussed.":[110],"To":[111,170],"increase":[112],"reusability,":[113],"mappings":[114],"Dublin":[117],"Core":[118],"DataCite":[120],"bibliometric":[121],"were":[123],"established":[124],"descriptive":[126],"fields.":[128],"Moreover,":[129],"we":[130],"deploy":[131],"controlled":[132],"vocabularies":[133],"terminology":[135],"tailored":[136],"respective":[139],"organizational":[144],"structure":[145],"CRC.":[148,169],"Using":[149],"this":[150,174],"schema,":[152],"neuroscientific":[153],"more":[156],"than":[157],"3,200":[158],"human":[159],"subjects":[160],"lab":[162],"animals":[163],"currently":[165],"shared":[166],"within":[167],"enable":[171],"schema":[175,204],"active":[177],"research,":[178],"open-source":[179],"applications":[180],"have":[181],"been":[182],"developed":[183],"store":[185],"local":[188],"JSON":[189],"files":[190],"along":[191],"make":[196],"searchable.":[198],"development":[200],"its":[206],"subsequent":[207],"use":[208],"illustrated":[210],"particular":[212],"emphasis":[213],"design":[215],"principles":[216],"allow":[218],"reuse":[220],"domains":[224],"lessons":[227],"learned.":[228]},"counts_by_year":[],"updated_date":"2026-03-10T14:07:55.174380","created_date":"2025-10-10T00:00:00"}
