{"id":"https://openalex.org/W2896883027","doi":"https://doi.org/10.5334/dsj-2018-026","title":"The Life Cycle of Structural Biology Data","display_name":"The Life Cycle of Structural Biology Data","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2896883027","doi":"https://doi.org/10.5334/dsj-2018-026","mag":"2896883027"},"language":"en","primary_location":{"id":"doi:10.5334/dsj-2018-026","is_oa":true,"landing_page_url":"https://doi.org/10.5334/dsj-2018-026","pdf_url":"http://datascience.codata.org/articles/10.5334/dsj-2018-026/galley/783/download/","source":{"id":"https://openalex.org/S62969111","display_name":"Data Science Journal","issn_l":"1683-1470","issn":["1683-1470"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320511","host_organization_name":"Ubiquity Press","host_organization_lineage":["https://openalex.org/P4310320511"],"host_organization_lineage_names":["Ubiquity Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data Science Journal","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"http://datascience.codata.org/articles/10.5334/dsj-2018-026/galley/783/download/","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071162200","display_name":"Chris Morris","orcid":"https://orcid.org/0000-0002-9533-5684"},"institutions":[{"id":"https://openalex.org/I2802015276","display_name":"Daresbury Laboratory","ror":"https://ror.org/0089bg420","country_code":"GB","type":"facility","lineage":["https://openalex.org/I162524378","https://openalex.org/I2802015276","https://openalex.org/I4210087105"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Chris Morris","raw_affiliation_strings":["STFC, Daresbury Laboratory, WA4 4AD"],"raw_orcid":"https://orcid.org/0000-0002-9533-5684","affiliations":[{"raw_affiliation_string":"STFC, Daresbury Laboratory, WA4 4AD","institution_ids":["https://openalex.org/I2802015276"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5071162200"],"corresponding_institution_ids":["https://openalex.org/I2802015276"],"apc_list":{"value":350,"currency":"GBP","value_usd":429},"apc_paid":{"value":350,"currency":"GBP","value_usd":429},"fwci":0.099,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.41107532,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"17","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9925000071525574,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/clarity","display_name":"CLARITY","score":0.6951963901519775},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.6697421073913574},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.618571400642395},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5467740893363953},{"id":"https://openalex.org/keywords/data-sharing","display_name":"Data sharing","score":0.5245471596717834},{"id":"https://openalex.org/keywords/data-access","display_name":"Data access","score":0.4239223599433899},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank","score":0.4205645024776459},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.415849506855011},{"id":"https://openalex.org/keywords/data-system","display_name":"Data system","score":0.41008615493774414},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2622969448566437},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22246846556663513},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.1903339922428131},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.1511402130126953},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.08329969644546509}],"concepts":[{"id":"https://openalex.org/C2777146004","wikidata":"https://www.wikidata.org/wiki/Q14949826","display_name":"CLARITY","level":2,"score":0.6951963901519775},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.6697421073913574},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.618571400642395},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5467740893363953},{"id":"https://openalex.org/C2779965156","wikidata":"https://www.wikidata.org/wiki/Q5227350","display_name":"Data sharing","level":3,"score":0.5245471596717834},{"id":"https://openalex.org/C47487241","wikidata":"https://www.wikidata.org/wiki/Q5227230","display_name":"Data access","level":2,"score":0.4239223599433899},{"id":"https://openalex.org/C119145174","wikidata":"https://www.wikidata.org/wiki/Q7251429","display_name":"Protein Data Bank","level":3,"score":0.4205645024776459},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.415849506855011},{"id":"https://openalex.org/C203481301","wikidata":"https://www.wikidata.org/wiki/Q76221","display_name":"Data system","level":2,"score":0.41008615493774414},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2622969448566437},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22246846556663513},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.1903339922428131},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.1511402130126953},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.08329969644546509},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.5334/dsj-2018-026","is_oa":true,"landing_page_url":"https://doi.org/10.5334/dsj-2018-026","pdf_url":"http://datascience.codata.org/articles/10.5334/dsj-2018-026/galley/783/download/","source":{"id":"https://openalex.org/S62969111","display_name":"Data Science Journal","issn_l":"1683-1470","issn":["1683-1470"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320511","host_organization_name":"Ubiquity Press","host_organization_lineage":["https://openalex.org/P4310320511"],"host_organization_lineage_names":["Ubiquity Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data Science Journal","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:7d81152698a848d0b296aee0f0b97282","is_oa":true,"landing_page_url":"https://doaj.org/article/7d81152698a848d0b296aee0f0b97282","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Data Science Journal, Vol 17 (2018)","raw_type":"article"},{"id":"pmh:oai:ojs.datascience.codata.org:article/740","is_oa":true,"landing_page_url":"https://datascience.codata.org/jms/article/view/dsj-2018-026","pdf_url":null,"source":{"id":"https://openalex.org/S62969111","display_name":"Data Science Journal","issn_l":"1683-1470","issn":["1683-1470"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320511","host_organization_name":"Ubiquity Press","host_organization_lineage":["https://openalex.org/P4310320511"],"host_organization_lineage_names":["Ubiquity Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Data Science Journal; Vol 17 (2018); 26","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:purl.org/net/epubs:work/39595865","is_oa":false,"landing_page_url":"http://purl.org/net/epubs/work/39595865","pdf_url":null,"source":{"id":"https://openalex.org/S4306400334","display_name":"Science and Technology Facilities Council","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.5334/dsj-2018-026","is_oa":true,"landing_page_url":"https://doi.org/10.5334/dsj-2018-026","pdf_url":"http://datascience.codata.org/articles/10.5334/dsj-2018-026/galley/783/download/","source":{"id":"https://openalex.org/S62969111","display_name":"Data Science Journal","issn_l":"1683-1470","issn":["1683-1470"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320511","host_organization_name":"Ubiquity Press","host_organization_lineage":["https://openalex.org/P4310320511"],"host_organization_lineage_names":["Ubiquity Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Data Science Journal","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/12","score":0.5199999809265137,"display_name":"Responsible consumption and production"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2896883027.pdf","grobid_xml":"https://content.openalex.org/works/W2896883027.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1581689621","https://openalex.org/W1819141267","https://openalex.org/W1965144253","https://openalex.org/W1966403038","https://openalex.org/W1973065301","https://openalex.org/W1973492476","https://openalex.org/W2008407287","https://openalex.org/W2070199183","https://openalex.org/W2081944619","https://openalex.org/W2099712765","https://openalex.org/W2104245002","https://openalex.org/W2131417105","https://openalex.org/W2159211495","https://openalex.org/W2252902923","https://openalex.org/W2254819570","https://openalex.org/W2465317107","https://openalex.org/W2551554347","https://openalex.org/W2608193358"],"related_works":["https://openalex.org/W2414507368","https://openalex.org/W2166798126","https://openalex.org/W4389950265","https://openalex.org/W2421443948","https://openalex.org/W2050921398","https://openalex.org/W4226034287","https://openalex.org/W2949958263","https://openalex.org/W1659892705","https://openalex.org/W4205759340","https://openalex.org/W606485594"],"abstract_inverted_index":{"<p":[0,38,110,170],"class=\"p1\">Research":[1],"data":[2,73,101,117],"is":[3,41,92,113,167],"acquired,":[4],"interpreted,":[5],"published,":[6],"reused,":[7],"and":[8,35,58,62,143,150],"sometimes":[9],"eventually":[10],"discarded.":[11],"Understanding":[12],"this":[13],"life":[14,46,55,118,163],"cycle":[15,119],"better":[16],"will":[17],"help":[18],"the":[19,45,51,60,77,80,98,116,123,162,180],"development":[20],"of":[21,54,64,72,79,89],"appropriate":[22],"infrastructural":[23],"services,":[24],"ones":[25],"which":[26],"make":[27],"it":[28],"easier":[29],"for":[30,176,183],"researchers":[31],"to":[32,141,153,161,179],"preserve,":[33],"share,":[34],"find":[36],"data.":[37,109,145],"class=\"p3\">Structural":[39],"biology":[40,67,91],"a":[42,69],"discipline":[43],"within":[44],"sciences,":[47],"one":[48],"that":[49,100],"investigates":[50],"molecular":[52],"basis":[53],"by":[56,76,122],"discovering":[57],"interpreting":[59],"shapes":[61],"motions":[63],"macromolecules.":[65],"Structural":[66],"has":[68],"strong":[70],"tradition":[71],"sharing,":[74],"expressed":[75],"founding":[78],"Protein":[81],"Data":[82,125],"Bank":[83],"(PDB)":[84],"in":[85,95],"1971.":[86],"The":[87],"culture":[88],"structural":[90,184],"therefore":[93],"already":[94],"line":[96],"with":[97,174],"perspective":[99],"from":[102],"publicly":[103],"funded":[104],"research":[105],"projects":[106],"are":[107,155],"public":[108],"class=\"p3\">This":[111],"review":[112,172],"based":[114],"on":[115],"as":[120],"defined":[121],"UK":[124],"Archive.":[126],"It":[127],"identifies":[128],"six":[129],"stages:":[130],"creating":[131],"data,":[132,134,136,138,142],"processing":[133],"analysing":[135],"preserving":[137],"giving":[139],"access":[140,152],"re-using":[144],"For":[146],"clarity,":[147],"\u02bbpreserving":[148],"data\u02bc":[149,154],"\u02bbgiving":[151],"discussed":[156],"together.":[157],"A":[158],"final":[159],"stage":[160],"cycle,":[164],"\u02bbdiscarding":[165],"data\u02bc,":[166],"also":[168],"discussed.":[169],"class=\"p3\">The":[171],"concludes":[173],"recommendations":[175],"future":[177],"improvements":[178],"IT":[181],"infrastructure":[182],"biology.":[185]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2018-10-26T00:00:00"}
