{"id":"https://openalex.org/W4394045299","doi":"https://doi.org/10.5281/zenodo.8185811","title":"Festem: Directly selecting differentially expressed genes for single-cell clustering analyses.","display_name":"Festem: Directly selecting differentially expressed genes for single-cell clustering analyses.","publication_year":2023,"publication_date":"2023-07-26","ids":{"openalex":"https://openalex.org/W4394045299","doi":"https://doi.org/10.5281/zenodo.8185811"},"language":"en","primary_location":{"id":"doi:10.5281/zenodo.8185811","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.8185811","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.8185811","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090565304","display_name":"Zihao Chen","orcid":"https://orcid.org/0000-0002-1382-0409"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chen, Zihao","raw_affiliation_strings":["Peking University"],"raw_orcid":"https://orcid.org/0000-0002-1382-0409","affiliations":[{"raw_affiliation_string":"Peking University","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101775240","display_name":"Changhu Wang","orcid":"https://orcid.org/0009-0002-8567-0961"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wang, Changhu","raw_affiliation_strings":["Peking University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Peking University","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101837811","display_name":"Siyuan Huang","orcid":"https://orcid.org/0000-0002-9819-3685"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huang, Siyuan","raw_affiliation_strings":["Peking University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Peking University","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025109126","display_name":"Yang Shi","orcid":"https://orcid.org/0000-0003-4530-2056"},"institutions":[{"id":"https://openalex.org/I4210100450","display_name":"BeiGene (China)","ror":"https://ror.org/012v2c923","country_code":"CN","type":"company","lineage":["https://openalex.org/I4210100450"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shi, Yang","raw_affiliation_strings":["BeiGene (Beijing) Co. Ltd"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BeiGene (Beijing) Co. Ltd","institution_ids":["https://openalex.org/I4210100450"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078729312","display_name":"Ruibin Xi","orcid":"https://orcid.org/0000-0001-7545-7361"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xi, Ruibin","raw_affiliation_strings":["Peking University"],"raw_orcid":"https://orcid.org/0000-0001-7545-7361","affiliations":[{"raw_affiliation_string":"Peking University","institution_ids":["https://openalex.org/I20231570"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.96670001745224,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.96670001745224,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.6341743469238281},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5324738025665283},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.4283597469329834},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.413192480802536},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.36462223529815674},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3465918302536011},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.332275927066803},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.32374829053878784},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.07109317183494568}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.6341743469238281},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5324738025665283},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.4283597469329834},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.413192480802536},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.36462223529815674},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3465918302536011},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.332275927066803},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.32374829053878784},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.07109317183494568}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.5281/zenodo.8185811","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.8185811","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.5281/zenodo.8185811","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.8185811","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2804364458","https://openalex.org/W4298130764","https://openalex.org/W2132641928","https://openalex.org/W4310225030","https://openalex.org/W2090259340","https://openalex.org/W2393816671","https://openalex.org/W2158836806","https://openalex.org/W2083665254","https://openalex.org/W1926736923"],"abstract_inverted_index":{"Datasets":[0],"related":[1],"to":[2],"article":[3],"\"Directly":[4],"selecting":[5],"differentially":[6],"expressed":[7],"genes":[8],"for":[9],"single-cell":[10],"clustering":[11],"analyses\".":[12],"Codes":[13],"are":[14],"available":[15],"at":[16],"https://github.com/XiDsLab/Festem_paper.":[17]},"counts_by_year":[],"updated_date":"2026-07-01T06:00:48.157686","created_date":"2025-10-10T00:00:00"}
