{"id":"https://openalex.org/W4393691133","doi":"https://doi.org/10.5281/zenodo.6538771","title":"Data and trained models for \"A systematic evaluation of deep learning methods for the prediction of drug synergy in cancer\"","display_name":"Data and trained models for \"A systematic evaluation of deep learning methods for the prediction of drug synergy in cancer\"","publication_year":2022,"publication_date":"2022-05-11","ids":{"openalex":"https://openalex.org/W4393691133","doi":"https://doi.org/10.5281/zenodo.6538771"},"language":"en","primary_location":{"id":"doi:10.5281/zenodo.6538771","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.6538771","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"dataset"},"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.6538771","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012833188","display_name":"Delora Baptista","orcid":"https://orcid.org/0000-0002-9258-5303"},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Baptista, Delora","raw_affiliation_strings":["Centre of Biological Engineering, University of Minho; LABBELS \u2013 Associate Laboratory, Portugal"],"raw_orcid":"https://orcid.org/0000-0002-9258-5303","affiliations":[{"raw_affiliation_string":"Centre of Biological Engineering, University of Minho; LABBELS \u2013 Associate Laboratory, Portugal","institution_ids":["https://openalex.org/I99682543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089291118","display_name":"Pedro G. Ferreira","orcid":"https://orcid.org/0000-0003-3838-8664"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]},{"id":"https://openalex.org/I4210166615","display_name":"INESC TEC","ror":"https://ror.org/05fa8ka61","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210125590","https://openalex.org/I4210166615"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Ferreira, Pedro G","raw_affiliation_strings":["Department of Computer Science, Faculty of Sciences, University of Porto; INESC TEC; Ipatimup - Institute of Molecular Pathology and Immunology of the University of Porto; i3s - Instituto de Investiga\u00e7\u00e3o e Inova\u00e7\u00e3o em Sa\u00fade da Universidade do Porto"],"raw_orcid":"https://orcid.org/0000-0003-3838-8664","affiliations":[{"raw_affiliation_string":"Department of Computer Science, Faculty of Sciences, University of Porto; INESC TEC; Ipatimup - Institute of Molecular Pathology and Immunology of the University of Porto; i3s - Instituto de Investiga\u00e7\u00e3o e Inova\u00e7\u00e3o em Sa\u00fade da Universidade do Porto","institution_ids":["https://openalex.org/I182534213","https://openalex.org/I4210166615"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040524717","display_name":"Miguel Rocha","orcid":"https://orcid.org/0000-0001-8439-8172"},"institutions":[{"id":"https://openalex.org/I99682543","display_name":"University of Minho","ror":"https://ror.org/037wpkx04","country_code":"PT","type":"education","lineage":["https://openalex.org/I99682543"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Rocha, Miguel","raw_affiliation_strings":["Centre of Biological Engineering, University of Minho; LABBELS \u2013 Associate Laboratory, Portugal"],"raw_orcid":"https://orcid.org/0000-0001-8439-8172","affiliations":[{"raw_affiliation_string":"Centre of Biological Engineering, University of Minho; LABBELS \u2013 Associate Laboratory, Portugal","institution_ids":["https://openalex.org/I99682543"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5012833188"],"corresponding_institution_ids":["https://openalex.org/I99682543"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9550999999046326,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5639652609825134},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5102088451385498},{"id":"https://openalex.org/keywords/cancer-drugs","display_name":"Cancer drugs","score":0.49144041538238525},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4585743546485901},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4475923478603363},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.44636180996894836},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.4117593467235565},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3214433789253235},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2108883559703827},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.15312090516090393},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.07517561316490173}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5639652609825134},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5102088451385498},{"id":"https://openalex.org/C3020340455","wikidata":"https://www.wikidata.org/wiki/Q974135","display_name":"Cancer drugs","level":3,"score":0.49144041538238525},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4585743546485901},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4475923478603363},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.44636180996894836},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.4117593467235565},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3214433789253235},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2108883559703827},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.15312090516090393},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.07517561316490173}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.5281/zenodo.6538771","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.6538771","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"}],"best_oa_location":{"id":"doi:10.5281/zenodo.6538771","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.6538771","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"dataset"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4375867731","https://openalex.org/W2611989081","https://openalex.org/W4230611425","https://openalex.org/W2731899572","https://openalex.org/W4304166257","https://openalex.org/W4294635752","https://openalex.org/W4206379684","https://openalex.org/W4383066092","https://openalex.org/W4380075502","https://openalex.org/W3205561628"],"abstract_inverted_index":{"This":[0],"repository":[1],"contains":[2],"preprocessed":[3,30,35,55],"data":[4,31,60],"files":[5,9,32,45],"and":[6,43,52,57],"trained":[7],"model":[8,67],"associated":[10],"with":[11,48],"the":[12,22,34,49,53,63,70],"manuscript":[13],"\"A":[14],"systematic":[15],"evaluation":[16],"of":[17,24],"deep":[18],"learning":[19],"methods":[20],"for":[21,62],"prediction":[23],"drug":[25,36,56],"synergy":[26],"in":[27,69],"cancer\".":[28],"The":[29],"include":[33],"response":[37,50],"dataset,":[38],"filtered":[39],"gene":[40,58],"expression,":[41],"mutation":[42],"CNV":[44],"(before":[46],"merging":[47],"dataset),":[51],"fully":[54],"expression":[59],"required":[61],"expr<sub>DGI</sub>":[64],"+":[65],"drugs<sub>ECFP4</sub>":[66],"described":[68],"study.":[71]},"counts_by_year":[],"updated_date":"2025-11-06T06:51:31.235846","created_date":"2025-10-10T00:00:00"}
