{"id":"https://openalex.org/W7140194656","doi":"https://doi.org/10.5281/zenodo.19204034","title":"MotifBench: Proteina Evaluation Results","display_name":"MotifBench: Proteina Evaluation Results","publication_year":2026,"publication_date":"2026-03-24","ids":{"openalex":"https://openalex.org/W7140194656","doi":"https://doi.org/10.5281/zenodo.19204034"},"language":null,"primary_location":{"id":"doi:10.5281/zenodo.19204034","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.19204034","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.19204034","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5135679692","display_name":"Zhuoqi Zheng","orcid":"https://orcid.org/0009-0009-8058-2883"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zheng, Zhuoqi","raw_affiliation_strings":["Shanghai Jiao Tong University"],"raw_orcid":"https://orcid.org/0009-0009-8058-2883","affiliations":[{"raw_affiliation_string":"Shanghai Jiao Tong University","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5146923663","display_name":"Bo Zhang","orcid":"https://orcid.org/0009-0007-7490-2196"},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhang, Bo","raw_affiliation_strings":["Tsinghua University"],"raw_orcid":"https://orcid.org/0009-0007-7490-2196","affiliations":[{"raw_affiliation_string":"Tsinghua University","institution_ids":["https://openalex.org/I99065089"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5146674194","display_name":"ODesign Team","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"ODesign Team","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":null,"topics":[],"keywords":[{"id":"https://openalex.org/keywords/scaffold","display_name":"Scaffold","score":0.6193000078201294},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.5095999836921692},{"id":"https://openalex.org/keywords/scaffold-protein","display_name":"Scaffold protein","score":0.4627000093460083},{"id":"https://openalex.org/keywords/residue","display_name":"Residue (chemistry)","score":0.40400001406669617},{"id":"https://openalex.org/keywords/amino-acid-residue","display_name":"Amino acid residue","score":0.2955999970436096}],"concepts":[{"id":"https://openalex.org/C89429830","wikidata":"https://www.wikidata.org/wiki/Q735710","display_name":"Scaffold","level":2,"score":0.6193000078201294},{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.5095999836921692},{"id":"https://openalex.org/C53645450","wikidata":"https://www.wikidata.org/wiki/Q907093","display_name":"Scaffold protein","level":3,"score":0.4627000093460083},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.4456000030040741},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.421999990940094},{"id":"https://openalex.org/C2781338088","wikidata":"https://www.wikidata.org/wiki/Q903495","display_name":"Residue (chemistry)","level":2,"score":0.40400001406669617},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.37209999561309814},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3165999948978424},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.3061000108718872},{"id":"https://openalex.org/C2994376932","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Amino acid residue","level":4,"score":0.2955999970436096},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.2831000089645386},{"id":"https://openalex.org/C2908868211","wikidata":"https://www.wikidata.org/wiki/Q4274835","display_name":"Ubiquitin-Protein Ligases","level":5,"score":0.2720000147819519},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.25519999861717224},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2540000081062317}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.5281/zenodo.19204034","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.19204034","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.5281/zenodo.19204034","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.19204034","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Evaluation":[0,11],"results":[1],"and":[2],"scaffolds":[3],"from":[4,28],"Proteina.":[5],"Scaffold":[6],"generator:":[7,12],"ODesign":[8],"team":[9],"(odesign@lglab.ac.cn)":[10],"Bo":[13],"Zhang,":[14],"Zhuoqi":[15],"Zheng":[16],"Note:":[17],"The":[18],"starting":[19],"residue":[20],"numbers":[21],"in":[22],"scaffold":[23],"PDB":[24],"files":[25],"were":[26],"re-indexed":[27],"0":[29],"to":[30,32],"1":[31],"match":[33],"the":[34],"convention":[35],"of":[36],"MotifBench.":[37]},"counts_by_year":[],"updated_date":"2026-08-12T21:12:35.861297","created_date":"2026-03-25T00:00:00"}