{"id":"https://openalex.org/W7125711541","doi":"https://doi.org/10.5281/zenodo.18341704","title":"FPGA Hardware - Mycelium Growth Dataset","display_name":"FPGA Hardware - Mycelium Growth Dataset","publication_year":2026,"publication_date":"2026-01-01","ids":{"openalex":"https://openalex.org/W7125711541","doi":"https://doi.org/10.5281/zenodo.18341704"},"language":null,"primary_location":{"id":"doi:10.5281/zenodo.18341704","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18341704","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.18341704","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5095706078","display_name":"Ioannis Tompris","orcid":null},"institutions":[{"id":"https://openalex.org/I147962203","display_name":"Democritus University of Thrace","ror":"https://ror.org/03bfqnx40","country_code":"GR","type":"education","lineage":["https://openalex.org/I147962203"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Tompris, Ioannis","raw_affiliation_strings":["Democritus University of Thrace"],"raw_orcid":"https://orcid.org/0009-0002-7189-9896","affiliations":[{"raw_affiliation_string":"Democritus University of Thrace","institution_ids":["https://openalex.org/I147962203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040330806","display_name":"Ioannis K. Chatzipaschalis","orcid":"https://orcid.org/0000-0002-3468-4442"},"institutions":[{"id":"https://openalex.org/I147962203","display_name":"Democritus University of Thrace","ror":"https://ror.org/03bfqnx40","country_code":"GR","type":"education","lineage":["https://openalex.org/I147962203"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES","GR"],"is_corresponding":false,"raw_author_name":"Chatzipaschalis, Ioannis","raw_affiliation_strings":["Universitat Polit\u00e8cnica de Catalunya","Democritus University of Thrace"],"raw_orcid":"https://orcid.org/0000-0002-3468-4442","affiliations":[{"raw_affiliation_string":"Universitat Polit\u00e8cnica de Catalunya","institution_ids":["https://openalex.org/I9617848"]},{"raw_affiliation_string":"Democritus University of Thrace","institution_ids":["https://openalex.org/I147962203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057075648","display_name":"Theodoros Panagiotis Chatzinikolaou","orcid":"https://orcid.org/0000-0002-2587-1895"},"institutions":[{"id":"https://openalex.org/I147962203","display_name":"Democritus University of Thrace","ror":"https://ror.org/03bfqnx40","country_code":"GR","type":"education","lineage":["https://openalex.org/I147962203"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Chatzinikolaou, Theodoros Panagiotis","raw_affiliation_strings":["Democritus University of Thrace"],"raw_orcid":"https://orcid.org/0000-0002-2587-1895","affiliations":[{"raw_affiliation_string":"Democritus University of Thrace","institution_ids":["https://openalex.org/I147962203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106654641","display_name":"Pantelis Fraidakis","orcid":null},"institutions":[{"id":"https://openalex.org/I147962203","display_name":"Democritus University of Thrace","ror":"https://ror.org/03bfqnx40","country_code":"GR","type":"education","lineage":["https://openalex.org/I147962203"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Fraidakis, Pantelis","raw_affiliation_strings":["Democritus University of Thrace"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Democritus University of Thrace","institution_ids":["https://openalex.org/I147962203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031060122","display_name":"G. Kleitsiotis","orcid":"https://orcid.org/0000-0002-4782-6390"},"institutions":[{"id":"https://openalex.org/I147962203","display_name":"Democritus University of Thrace","ror":"https://ror.org/03bfqnx40","country_code":"GR","type":"education","lineage":["https://openalex.org/I147962203"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Kleitsiotis, Georgios","raw_affiliation_strings":["Democritus University of Thrace"],"raw_orcid":"https://orcid.org/0000-0002-4782-6390","affiliations":[{"raw_affiliation_string":"Democritus University of Thrace","institution_ids":["https://openalex.org/I147962203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032970945","display_name":"Iosif-Angelos Fyrigos","orcid":"https://orcid.org/0000-0001-8032-1725"},"institutions":[{"id":"https://openalex.org/I147962203","display_name":"Democritus University of Thrace","ror":"https://ror.org/03bfqnx40","country_code":"GR","type":"education","lineage":["https://openalex.org/I147962203"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Fyrigos, Iosif-Angelos","raw_affiliation_strings":["Democritus University of Thrace"],"raw_orcid":"https://orcid.org/0000-0001-8032-1725","affiliations":[{"raw_affiliation_string":"Democritus University of Thrace","institution_ids":["https://openalex.org/I147962203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030851089","display_name":"Ioannis Vourkas","orcid":"https://orcid.org/0000-0002-7036-8092"},"institutions":[{"id":"https://openalex.org/I75778554","display_name":"Federico Santa Mar\u00eda Technical University","ror":"https://ror.org/05510vn56","country_code":"CL","type":"education","lineage":["https://openalex.org/I75778554"]}],"countries":["CL"],"is_corresponding":false,"raw_author_name":"Vourkas, Ioannis","raw_affiliation_strings":["Federico Santa Mar\u00eda Technical University"],"raw_orcid":"https://orcid.org/0000-0002-7036-8092","affiliations":[{"raw_affiliation_string":"Federico Santa Mar\u00eda Technical University","institution_ids":["https://openalex.org/I75778554"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5123877431","display_name":"Georgios Sirakoulis","orcid":null},"institutions":[{"id":"https://openalex.org/I147962203","display_name":"Democritus University of Thrace","ror":"https://ror.org/03bfqnx40","country_code":"GR","type":"education","lineage":["https://openalex.org/I147962203"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Sirakoulis, Georgios","raw_affiliation_strings":["Democritus University of Thrace"],"raw_orcid":"https://orcid.org/0000-0001-8240-484X","affiliations":[{"raw_affiliation_string":"Democritus University of Thrace","institution_ids":["https://openalex.org/I147962203"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":null,"topics":[],"keywords":[{"id":"https://openalex.org/keywords/field-programmable-gate-array","display_name":"Field-programmable gate array","score":0.7635999917984009},{"id":"https://openalex.org/keywords/mycelium","display_name":"Mycelium","score":0.6922000050544739},{"id":"https://openalex.org/keywords/sample","display_name":"Sample (material)","score":0.5613999962806702},{"id":"https://openalex.org/keywords/initialization","display_name":"Initialization","score":0.499099999666214},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.40849998593330383}],"concepts":[{"id":"https://openalex.org/C42935608","wikidata":"https://www.wikidata.org/wiki/Q190411","display_name":"Field-programmable gate array","level":2,"score":0.7635999917984009},{"id":"https://openalex.org/C133479454","wikidata":"https://www.wikidata.org/wiki/Q326228","display_name":"Mycelium","level":2,"score":0.6922000050544739},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5651999711990356},{"id":"https://openalex.org/C198531522","wikidata":"https://www.wikidata.org/wiki/Q485146","display_name":"Sample (material)","level":2,"score":0.5613999962806702},{"id":"https://openalex.org/C114466953","wikidata":"https://www.wikidata.org/wiki/Q6034165","display_name":"Initialization","level":2,"score":0.499099999666214},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.40849998593330383},{"id":"https://openalex.org/C182365436","wikidata":"https://www.wikidata.org/wiki/Q50701","display_name":"Variable (mathematics)","level":2,"score":0.3691999912261963},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.33000001311302185},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3086000084877014},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.28679999709129333},{"id":"https://openalex.org/C2781039887","wikidata":"https://www.wikidata.org/wiki/Q1391724","display_name":"Factor (programming language)","level":2,"score":0.2856999933719635},{"id":"https://openalex.org/C9390403","wikidata":"https://www.wikidata.org/wiki/Q3966","display_name":"Computer hardware","level":1,"score":0.27730000019073486},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.26330000162124634}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.5281/zenodo.18341704","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18341704","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.5281/zenodo.18341704","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.18341704","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Dataset"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4802022325","display_name":null,"funder_award_id":"101071145","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"(Readme)":[0],"Zenodo":[1],"Dataset:":[2],"FPGA":[3,129,195,200,207,212,219,227],"Hardware":[4],"-":[5],"Mycelium":[6],"Growth":[7],"DatasetDataset":[8],"root":[9],"folder:":[10],"Zenodo/":[11],"1.":[12],"OverviewThis":[13],"dataset":[14,150,273,459],"contains":[15],"outcomes":[16],"of":[17,40,105,174,278,288,390,447],"mycelium":[18,60,72,125,143,160,466],"growth":[19,126],"patterns":[20],"produced":[21],"by":[22,164,358],"repeatedly":[23],"running":[24],"a":[25,30,37,97,102,158,165,263,345,395,407,444,457],"reaction\u2013diffusion":[26,106,237],"(RD)":[27],"model":[28],"on":[29,244],"two-dimensional":[31],"spatial":[32,75,246,286],"domain.":[33],"Each":[34,91,155,380,428],"run":[35,116,330,429],"evolves":[36,239],"coupled":[38,241],"set":[39,104],"fields":[41],"under":[42],"controlled":[43],"and":[44,48,69,89,101,139,177,300,362,441,468,472],"variable":[45],"environmental":[46,67,99,167,305,371,377,404,426,475],"conditions":[47,420,436],"stores":[49],"the":[50,114,128,132,140,245,269,275,279,285,289,354,387,391],"final":[51,133,276],"state":[52,242,277],"after":[53],"50,000":[54],"iterations.":[55],"Herein,":[56],"four":[57,66,70,84,141,148],"spatially":[58,137,346,408],"distinct":[59,71,103,159,334,425,465],"instances":[61,144],"are":[62,145,182,307,327,373],"produced,":[63],"corresponding":[64,388],"to":[65,153,331,364,386,424],"scenarios":[68],"types.":[73],"The":[74,179,272,369],"domain":[76],"is":[77,94,136,342,383,430],"partitioned":[78],"into":[79,147,375],"multiple":[80],"equal":[81],"subareas,":[82],"with":[83,96,253,349,432],"selected":[85],"subareas":[86,110,416,440],"actively":[87],"seeded":[88,92,109],"analyzed.":[90],"subarea":[93,389],"associated":[95,252],"specific":[98],"factor":[100,168,382],"parameters.":[107],"All":[108],"evolve":[111],"simultaneously":[112],"within":[113,293,353,366],"same":[115],"while":[117,421],"preserving":[118],"identical":[119,418,433],"initialization":[120,419],"conditions.":[121],"This":[122,411],"enables":[123],"parallel":[124,470],"in":[127,184,188,268,406,437],"hardware.":[130],"Afterwards,":[131],"biomass":[134,265,280],"field":[135,251,259,266,281,348,399],"partitioned,":[138],"subarea-specific":[142],"reorganized":[146],"independent":[149,324],"branches":[151],"(mycelium_1":[152],"mycelium_4).":[154],"branch":[156],"represents":[157,284],"type":[161],"driven":[162],"primarily":[163],"single":[166,396],"(temperature,":[169],"humidity,":[170],"or":[171],"light":[172,175],"consisting":[173],"wavelength":[176],"intensity).":[178],"final-state":[180],"images":[181],"stored":[183],"this":[185,451],"dataset,":[186],"exported":[187],"JPEG":[189],"format.":[190],"2.":[191],"Folder":[192],"StructureZenodo/":[193],"mycelium_1/":[194],"Sample":[196,201,208,213,220,228],"T":[197,202],"/":[198,203,210,215,223,231],"c_50000.jpeg":[199,204,211,216,224,232],"...":[205,217,225,233],"mycelium_2/":[206],"H":[209,214],"mycelium_3/":[218],"L1_I":[221],"_W":[222,230],"mycelium_4/":[226],"L2_I":[229],"3.":[234],"Model":[235],"VariablesThe":[236],"system":[238],"three":[240],"variables":[243],"grid:-":[247],"u(x,y,t):":[248],"an":[249,257],"activator":[250],"growth-driving":[254],"processes-":[255],"v(x,y,t):":[256],"suppressor":[258],"regulating":[260],"suppression-":[261],"c(x,y,t):":[262],"bistable":[264],"belonging":[267],"interval":[270],"[0,1]":[271],"visualizes":[274],"c,":[282],"which":[283],"morphology":[287],"developed":[290],"mycelial":[291],"network":[292],"each":[294,303],"subarea.":[295],"4.":[296],"Environmental":[297],"Parameter":[298],"Sampling":[299],"Subarea":[301],"AssignmentFor":[302],"run,":[304],"parameters":[306,372],"sampled":[308,351,370],"independently":[309],"from":[310],"predefined":[311],"continuous":[312],"ranges:-":[313],"Temperature:":[314],"10\u201335-":[315],"Humidity:":[316],"70\u2013100-":[317],"Light":[318],"intensity:":[319],"0\u2013100-":[320],"Wavelength:":[321],"350\u2013700":[322],"Two":[323],"intensity\u2013wavelength":[325],"pairs":[326],"generated":[328],"per":[329],"define":[332],"two":[333],"light-sensitive":[335],"subareas.":[336],"A":[337],"base":[338],"substrate":[339,392,398],"matrix":[340],"n":[341,400],"initialized":[343,431],"as":[344],"heterogeneous":[347],"randomly":[350],"values":[352],"unit":[355],"interval,":[356],"perturbed":[357],"additive":[359],"Gaussian":[360],"noise":[361],"clipped":[363],"remain":[365],"these":[367],"bounds.":[368],"transformed":[374],"nonlinear":[376],"scaling":[378,381],"factors.":[379],"applied":[384],"multiplicatively":[385],"matrix,":[393],"yielding":[394],"aggregated":[397],"that":[401,414,460],"encodes":[402],"all":[403,415,438],"influences":[405],"resolved":[409],"manner.":[410],"approach":[412],"ensures":[413],"share":[417],"being":[422],"subject":[423],"modulation.":[427],"localized":[434],"seed":[435],"active":[439],"evolved":[442],"for":[443],"fixed":[445],"number":[446],"time":[448],"steps.":[449],"Repeating":[450],"procedure":[452],"across":[453],"many":[454],"runs":[455],"produces":[456],"structured":[458],"combines":[461],"systematic":[462],"single-factor":[463],"isolation,":[464],"types":[467],"their":[469],"growth,":[471],"randomized":[473],"multi-factor":[474],"variability.":[476]},"counts_by_year":[],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2026-01-27T00:00:00"}
