{"id":"https://openalex.org/W7116403545","doi":"https://doi.org/10.5281/zenodo.17989278","title":"Code for: Predictive Modeling of Chronic Foot Ulcer Outcomes Using Longitudinal Photoacoustic Imaging","display_name":"Code for: Predictive Modeling of Chronic Foot Ulcer Outcomes Using Longitudinal Photoacoustic Imaging","publication_year":2025,"publication_date":"2025-12-19","ids":{"openalex":"https://openalex.org/W7116403545","doi":"https://doi.org/10.5281/zenodo.17989278"},"language":"en","primary_location":{"id":"doi:10.5281/zenodo.17989278","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.17989278","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Software"},"type":"software","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.17989278","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038421827","display_name":"Yanda Cheng","orcid":"https://orcid.org/0009-0005-1491-9493"},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cheng, Yanda","raw_affiliation_strings":["University at Buffalo, State University of New York"],"raw_orcid":"https://orcid.org/0009-0005-1491-9493","affiliations":[{"raw_affiliation_string":"University at Buffalo, State University of New York","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044554441","display_name":"Chuqin Huang","orcid":"https://orcid.org/0000-0001-6377-2188"},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Huang, Chuqin","raw_affiliation_strings":["University at Buffalo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University at Buffalo","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035190567","display_name":"Shu-liang Yu","orcid":null},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yu, Shu-liang","raw_affiliation_strings":["University at Buffalo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University at Buffalo","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5120932562","display_name":"Saptarshi Chakraborty","orcid":null},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chakraborty, Saptarshi","raw_affiliation_strings":["University at Buffalo, State University of New York"],"raw_orcid":"https://orcid.org/0000-0002-3121-9174","affiliations":[{"raw_affiliation_string":"University at Buffalo, State University of New York","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052447275","display_name":"Yunqi Xi","orcid":null},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xi, Yunqi","raw_affiliation_strings":["University at Buffalo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University at Buffalo","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054806241","display_name":"Robert W. Bing","orcid":"https://orcid.org/0009-0006-6841-4914"},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bing, Robert","raw_affiliation_strings":["University at Buffalo, State University of New York"],"raw_orcid":"https://orcid.org/0009-0006-6841-4914","affiliations":[{"raw_affiliation_string":"University at Buffalo, State University of New York","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100420321","display_name":"Huijuan Zhang","orcid":"https://orcid.org/0000-0002-5139-1430"},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhang, Huijuan","raw_affiliation_strings":["University at Buffalo"],"raw_orcid":"https://orcid.org/0000-0002-5139-1430","affiliations":[{"raw_affiliation_string":"University at Buffalo","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5120924123","display_name":"Xiaoyu Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhang, Xiaoyu","raw_affiliation_strings":["University at Buffalo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University at Buffalo","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092088659","display_name":"Isabel Komornicki","orcid":null},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Komornicki, Isabel","raw_affiliation_strings":["University at Buffalo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University at Buffalo","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013676676","display_name":"Linda J. Harris","orcid":"https://orcid.org/0000-0002-9098-305X"},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Harris, Linda","raw_affiliation_strings":["University at Buffalo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University at Buffalo","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107826905","display_name":"W. Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xu, Wenyao","raw_affiliation_strings":["University at Buffalo, State University of New York"],"raw_orcid":"https://orcid.org/0000-0001-6444-9411","affiliations":[{"raw_affiliation_string":"University at Buffalo, State University of New York","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5120894937","display_name":"Jun XIA","orcid":null},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"XIA, Jun","raw_affiliation_strings":["University at Buffalo"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University at Buffalo","institution_ids":["https://openalex.org/I63190737"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I63190737"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":null,"topics":[],"keywords":[{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.4553000032901764},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.43700000643730164},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4169999957084656},{"id":"https://openalex.org/keywords/data-extraction","display_name":"Data extraction","score":0.41019999980926514},{"id":"https://openalex.org/keywords/matlab","display_name":"MATLAB","score":0.4083999991416931},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.3246999979019165},{"id":"https://openalex.org/keywords/patient-data","display_name":"Patient data","score":0.32260000705718994}],"concepts":[{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.6383000016212463},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.4796999990940094},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.4553000032901764},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.43700000643730164},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.42329999804496765},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4169999957084656},{"id":"https://openalex.org/C2777466982","wikidata":"https://www.wikidata.org/wiki/Q5227287","display_name":"Data extraction","level":3,"score":0.41019999980926514},{"id":"https://openalex.org/C2780365114","wikidata":"https://www.wikidata.org/wiki/Q169478","display_name":"MATLAB","level":2,"score":0.4083999991416931},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.37229999899864197},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.3246999979019165},{"id":"https://openalex.org/C3018822202","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Patient data","level":2,"score":0.32260000705718994},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.3183000087738037},{"id":"https://openalex.org/C19527891","wikidata":"https://www.wikidata.org/wiki/Q1120908","display_name":"Medical physics","level":1,"score":0.29809999465942383},{"id":"https://openalex.org/C143753070","wikidata":"https://www.wikidata.org/wiki/Q162564","display_name":"Ultrasound","level":2,"score":0.27630001306533813},{"id":"https://openalex.org/C171730128","wikidata":"https://www.wikidata.org/wiki/Q5227290","display_name":"Data file","level":2,"score":0.26989999413490295},{"id":"https://openalex.org/C2779974597","wikidata":"https://www.wikidata.org/wiki/Q28448986","display_name":"Clinical Practice","level":2,"score":0.2628999948501587},{"id":"https://openalex.org/C54932901","wikidata":"https://www.wikidata.org/wiki/Q7187705","display_name":"Photoacoustic imaging in biomedicine","level":2,"score":0.2612999975681305},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.26100000739097595},{"id":"https://openalex.org/C100463513","wikidata":"https://www.wikidata.org/wiki/Q5227322","display_name":"Data model (GIS)","level":2,"score":0.2556999921798706},{"id":"https://openalex.org/C2989005","wikidata":"https://www.wikidata.org/wiki/Q214963","display_name":"Nuclear medicine","level":1,"score":0.25529998540878296},{"id":"https://openalex.org/C61797465","wikidata":"https://www.wikidata.org/wiki/Q1188986","display_name":"Term (time)","level":2,"score":0.25119999051094055}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.5281/zenodo.17989278","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.17989278","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Software"}],"best_oa_location":{"id":"doi:10.5281/zenodo.17989278","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.17989278","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Software"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"This":[0],"record":[1,30],"contains":[2],"MATLAB":[3],"scripts":[4,36],"to":[5,32],"reproduce":[6],"the":[7,16,41,46],"feature":[8],"extraction":[9],"and":[10,53],"model":[11],"evaluation":[12],"pipeline":[13],"described":[14,44],"in":[15,27,40,45],"associated":[17],"manuscript.Included":[18],"scripts:":[19],"step01_feature_extraction.m,":[20],"step02_performance_individual.m,":[21],"step03_seed_AUC.m.No":[22],"patient":[23],"data":[24],"are":[25],"included":[26],"this":[28],"Zenodo":[29],"due":[31],"privacy/IRB":[33],"constraints.":[34],"The":[35],"expect":[37],"input":[38],"tables/files":[39],"same":[42],"format":[43],"manuscript":[47],"(see":[48],"README":[49],"for":[50],"required":[51],"fields":[52],"file":[54],"structure).":[55]},"counts_by_year":[],"updated_date":"2026-07-01T06:00:48.157686","created_date":"2025-12-21T00:00:00"}
