{"id":"https://openalex.org/W6930892132","doi":"https://doi.org/10.5281/zenodo.15498407","title":"Supporting data and code for \"Multi-scale early warning system for influenza A spillovers\"","display_name":"Supporting data and code for \"Multi-scale early warning system for influenza A spillovers\"","publication_year":2025,"publication_date":"2025-05-24","ids":{"openalex":"https://openalex.org/W6930892132","doi":"https://doi.org/10.5281/zenodo.15498407"},"language":"en","primary_location":{"id":"doi:10.5281/zenodo.15498407","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.15498407","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},"type":"other","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.15498407","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Alfonsi, Tommaso","orcid":"https://orcid.org/0000-0002-4707-8425"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Alfonsi, Tommaso","raw_affiliation_strings":["Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0002-4707-8425","affiliations":[{"raw_affiliation_string":"Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Bernasconi, Anna","orcid":"https://orcid.org/0000-0001-8016-5750"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Bernasconi, Anna","raw_affiliation_strings":["Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0001-8016-5750","affiliations":[{"raw_affiliation_string":"Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Chiara, Matteo","orcid":"https://orcid.org/0000-0003-3983-4961"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Chiara, Matteo","raw_affiliation_strings":["Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0003-3983-4961","affiliations":[{"raw_affiliation_string":"Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano, Milan, Italy","institution_ids":["https://openalex.org/I189158943"]}]},{"author_position":"last","author":{"id":null,"display_name":"Ceri, Stefano","orcid":"https://orcid.org/0000-0003-0671-2415"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Ceri, Stefano","raw_affiliation_strings":["Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0003-0671-2415","affiliations":[{"raw_affiliation_string":"Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I93860229"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":true,"primary_topic":{"id":"https://openalex.org/T12014","display_name":"Fish biology, ecology, and behavior","score":0.9254999756813049,"subfield":{"id":"https://openalex.org/subfields/2309","display_name":"Nature and Landscape Conservation"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12014","display_name":"Fish biology, ecology, and behavior","score":0.9254999756813049,"subfield":{"id":"https://openalex.org/subfields/2309","display_name":"Nature and Landscape Conservation"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12319","display_name":"Fish Biology and Ecology Studies","score":0.03099999949336052,"subfield":{"id":"https://openalex.org/subfields/1104","display_name":"Aquatic Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10302","display_name":"Fish Ecology and Management Studies","score":0.016899999231100082,"subfield":{"id":"https://openalex.org/subfields/2309","display_name":"Nature and Landscape Conservation"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/license","display_name":"License","score":0.7261999845504761},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.6463000178337097},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5116999745368958},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.3684999942779541},{"id":"https://openalex.org/keywords/mit-license","display_name":"MIT License","score":0.36469998955726624},{"id":"https://openalex.org/keywords/warning-system","display_name":"Warning system","score":0.34779998660087585}],"concepts":[{"id":"https://openalex.org/C2780560020","wikidata":"https://www.wikidata.org/wiki/Q79719","display_name":"License","level":2,"score":0.7261999845504761},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.6463000178337097},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5687999725341797},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5116999745368958},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.40790000557899475},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.3684999942779541},{"id":"https://openalex.org/C174183944","wikidata":"https://www.wikidata.org/wiki/Q334661","display_name":"MIT License","level":3,"score":0.36469998955726624},{"id":"https://openalex.org/C29825287","wikidata":"https://www.wikidata.org/wiki/Q1427940","display_name":"Warning system","level":2,"score":0.34779998660087585},{"id":"https://openalex.org/C2779296788","wikidata":"https://www.wikidata.org/wiki/Q5326904","display_name":"Early warning system","level":3,"score":0.33250001072883606},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3301999866962433},{"id":"https://openalex.org/C2777382242","wikidata":"https://www.wikidata.org/wiki/Q6017816","display_name":"Index (typography)","level":2,"score":0.3041999936103821},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.2822999954223633},{"id":"https://openalex.org/C15190224","wikidata":"https://www.wikidata.org/wiki/Q1417099","display_name":"Accession number (library science)","level":4,"score":0.2728999853134155},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.2678999900817871},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2621000111103058}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.5281/zenodo.15498407","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.15498407","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.5281/zenodo.15498407","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.15498407","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"This":[0],"repository":[1,134],"includes":[2],"the":[3,9,13,50,54,58,64,72,93,105,117,145],"code":[4,139],"and":[5,30,45,71,79,87,99,111,123],"accession":[6],"IDs":[7],"of":[8,60,66,92,104,116],"viral":[10],"sequences":[11,61,75,83,91,103,115],"for":[12,19,43,63],"manuscript":[14],"\"Multi-scale":[15],"early":[16],"warning":[17],"system":[18],"influenza":[20],"A":[21],"spillovers\"":[22],"by":[23],"Alfonsi":[24],"T.,":[25],"Bernasconi":[26],"A.,":[27],"Chiara":[28],"M.,":[29],"Ceri":[31],"S.":[32],"Index":[33],"The":[34,138],"software":[35],"is":[36,128,142],"released":[37],"as":[38],"a":[39],"docker":[40],"container.":[41],"Instructions":[42],"installation":[44],"use":[46],"are":[47],"provided":[48],"in":[49],"README.md":[51],"file.":[52],"Furthermore,":[53],"folder":[55],"dataset_ids":[56],"contains":[57],"list":[59],"used":[62],"analysis":[65],"H1N1":[67],"sequences,":[68,70],"H5N1":[69],"sensitivity/specificity":[73],"analysis.H1N1":[74],"collected":[76,84,96,108,120],"between":[77,85,97,109,121],"2008/08/07":[78],"2010/01/09":[80],">":[81,89],"H1N1_08-09_dataset.csvH5N1":[82],"2019/01/12":[86],"2025/01/15":[88],"H5N1_19-25_dataset.csvH1N1":[90],"group":[94,106,118],"G1":[95],"2009/01/26":[98],"2009/02/20":[100,122],"(25":[101],"days)H1N1":[102,114],"G2":[107],"2009/12/14":[110],"2010/01/10":[112],"(27":[113],"\"noise\"":[119],"2009/03/01":[124],"(9":[125],"days)":[126],"It":[127],"also":[129],"possible":[130],"to":[131],"browse":[132],"this":[133],"on":[135],"GitHub.":[136],"License":[137,147],"hereby":[140],"contained":[141],"lincensed":[143],"under":[144],"MIT":[146],"(see":[148],"LICENSE":[149],"file).":[150]},"counts_by_year":[],"updated_date":"2025-11-06T06:51:31.235846","created_date":"2025-10-10T00:00:00"}
