{"id":"https://openalex.org/W6893229283","doi":"https://doi.org/10.5281/zenodo.14860697","title":"Supporting data and code for \"Multi-scale early spillover warnings for influenza A viruses\"","display_name":"Supporting data and code for \"Multi-scale early spillover warnings for influenza A viruses\"","publication_year":2025,"publication_date":"2025-02-17","ids":{"openalex":"https://openalex.org/W6893229283","doi":"https://doi.org/10.5281/zenodo.14860697"},"language":"en","primary_location":{"id":"doi:10.5281/zenodo.14860697","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.14860697","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},"type":"other","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.14860697","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Alfonsi, Tommaso","orcid":"https://orcid.org/0000-0002-4707-8425"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Alfonsi, Tommaso","raw_affiliation_strings":["Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0002-4707-8425","affiliations":[{"raw_affiliation_string":"Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Bernasconi, Anna","orcid":"https://orcid.org/0000-0001-8016-5750"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Bernasconi, Anna","raw_affiliation_strings":["Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0001-8016-5750","affiliations":[{"raw_affiliation_string":"Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Chiara, Matteo","orcid":"https://orcid.org/0000-0003-3983-4961"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Chiara, Matteo","raw_affiliation_strings":["Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0003-3983-4961","affiliations":[{"raw_affiliation_string":"Dipartimento di Bioscienze, Universit\u00e0 degli Studi di Milano, Milan, Italy","institution_ids":["https://openalex.org/I189158943"]}]},{"author_position":"last","author":{"id":null,"display_name":"Ceri, Stefano","orcid":"https://orcid.org/0000-0003-0671-2415"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Ceri, Stefano","raw_affiliation_strings":["Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy"],"raw_orcid":"https://orcid.org/0000-0003-0671-2415","affiliations":[{"raw_affiliation_string":"Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I93860229"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":true,"primary_topic":null,"topics":[],"keywords":[{"id":"https://openalex.org/keywords/license","display_name":"License","score":0.6725999712944031},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.6550999879837036},{"id":"https://openalex.org/keywords/container","display_name":"Container (type theory)","score":0.4569000005722046},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.39719998836517334},{"id":"https://openalex.org/keywords/clone","display_name":"clone (Java method)","score":0.3398999869823456},{"id":"https://openalex.org/keywords/spillover-effect","display_name":"Spillover effect","score":0.3057999908924103}],"concepts":[{"id":"https://openalex.org/C2780560020","wikidata":"https://www.wikidata.org/wiki/Q79719","display_name":"License","level":2,"score":0.6725999712944031},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.6550999879837036},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6050999760627747},{"id":"https://openalex.org/C2781018962","wikidata":"https://www.wikidata.org/wiki/Q5164884","display_name":"Container (type theory)","level":2,"score":0.4569000005722046},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.39719998836517334},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3865000009536743},{"id":"https://openalex.org/C81089528","wikidata":"https://www.wikidata.org/wiki/Q5134986","display_name":"clone (Java method)","level":3,"score":0.3398999869823456},{"id":"https://openalex.org/C55527203","wikidata":"https://www.wikidata.org/wiki/Q334194","display_name":"Spillover effect","level":2,"score":0.3057999908924103},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.290800005197525},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.272599995136261},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.2655999958515167},{"id":"https://openalex.org/C2777382242","wikidata":"https://www.wikidata.org/wiki/Q6017816","display_name":"Index (typography)","level":2,"score":0.2612000107765198},{"id":"https://openalex.org/C519248777","wikidata":"https://www.wikidata.org/wiki/Q160122","display_name":"Influenza A virus subtype H5N1","level":3,"score":0.251800000667572}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.5281/zenodo.14860697","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.14860697","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.5281/zenodo.14860697","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.14860697","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"This":[0],"repository":[1,35],"includes":[2],"the":[3,9,13,43,50,55,61,68,74,82,106,119,132,144,156,166],"code":[4,44,145,160],"and":[5,30,48,81,90,99,112,125,138],"accession":[6],"IDs":[7],"of":[8,63,70,76,105,118,131,143],"viral":[10],"sequences":[11,71,86,95,104,117,130],"for":[12,19,46,59,73,154],"manuscript":[14],"\"Multi-scale":[15],"early":[16],"spillover":[17],"warnings":[18],"influenza":[20],"A":[21],"viruses\"":[22],"by":[23],"Alfonsi":[24],"T.,":[25],"Bernasconi":[26],"A.,":[27],"Chiara":[28],"M.,":[29],"Ceri":[31],"S.":[32],"Index":[33],"The":[34,159],"is":[36,163],"divided":[37],"in":[38],"three":[39],"folders/parts:":[40],"data_processing":[41],"contains":[42,54,67,147],"used":[45,58,72],"processing":[47],"analyzing":[49],"input":[51],"data.":[52],"data_warehouse":[53],"Docker":[56],"container":[57],"illustrating":[60],"result":[62],"our":[64],"analysis.":[65,84],"dataset_ids":[66],"list":[69],"analysis":[75],"H1N1":[77,85,103,116,129],"sequences,":[78,80],"H5N1":[79,94],"sensitivity/specificity":[83],"collected":[87,96,109,122,135],"between":[88,97,110,123,136],"2008/08/07":[89],"2010/01/09":[91],">":[92,101],"H1N1_08-09_dataset.csv":[93],"2019/01/12":[98],"2025/01/15":[100],"H5N1_19-25_dataset.csv":[102],"group":[107,120,133],"G1":[108],"2009/01/26":[111],"2009/02/20":[113,137],"(25":[114],"days)":[115,128,141],"G2":[121],"2009/12/14":[124],"2010/01/10":[126],"(27":[127],"\"noise\"":[134],"2009/03/01":[139],"(9":[140],"Each":[142],"folders":[146],"a":[148],"README.md":[149],"file":[150],"providing":[151],"in-depth":[152],"instructions":[153],"replicating":[155],"analyses.":[157],"License":[158,168],"hereby":[161],"contained":[162],"lincensed":[164],"under":[165],"MIT":[167],"(see":[169],"LICENSE":[170],"file).":[171]},"counts_by_year":[],"updated_date":"2025-11-06T06:51:31.235846","created_date":"2025-10-10T00:00:00"}
