{"id":"https://openalex.org/W6949522999","doi":"https://doi.org/10.5281/zenodo.14681181","title":"A MATLAB-based Instrument Control (MIC) package for fluorescence imaging","display_name":"A MATLAB-based Instrument Control (MIC) package for fluorescence imaging","publication_year":2025,"publication_date":"2025-01-17","ids":{"openalex":"https://openalex.org/W6949522999","doi":"https://doi.org/10.5281/zenodo.14681181"},"language":"en","primary_location":{"id":"doi:10.5281/zenodo.14681181","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.14681181","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},"type":"other","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.14681181","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Khan, Sajjad A.","orcid":"https://orcid.org/0000-0002-6910-5199"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Khan, Sajjad A.","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA; Nanoscience and Microsystems Engineering, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0000-0002-6910-5199","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA; Nanoscience and Microsystems Engineering, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Pallikkuth, Sandeep","orcid":"https://orcid.org/0009-0003-0400-6389"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pallikkuth, Sandeep","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0009-0003-0400-6389","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Schodt, David J.","orcid":"https://orcid.org/0000-0002-8986-2736"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Schodt, David J.","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0000-0002-8986-2736","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Meddens, Marjolein B. M.","orcid":"https://orcid.org/0000-0002-9965-1342"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meddens, Marjolein B. M.","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0000-0002-9965-1342","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Mazloom-Farsibaf, Hanieh","orcid":"https://orcid.org/0000-0002-2571-0418"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mazloom-Farsibaf, Hanieh","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0000-0002-2571-0418","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Wester, Michael J.","orcid":"https://orcid.org/0000-0002-3520-7605"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wester, Michael J.","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA; Department of Mathematics and Statistics, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0000-0002-3520-7605","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA; Department of Mathematics and Statistics, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Liu, Sheng","orcid":"https://orcid.org/0000-0003-1225-0763"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Liu, Sheng","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0000-0003-1225-0763","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Taylor, Ellyse","orcid":"https://orcid.org/0009-0006-7269-2271"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Taylor, Ellyse","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0009-0006-7269-2271","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Fazel, Mohamadreza","orcid":"https://orcid.org/0000-0002-6215-1336"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fazel, Mohamadreza","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0000-0002-6215-1336","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Farzam, Farzin","orcid":"https://orcid.org/0000-0002-9939-1923"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Farzam, Farzin","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0000-0002-9939-1923","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"last","author":{"id":null,"display_name":"Lidke, Keith A.","orcid":"https://orcid.org/0000-0002-9328-4318"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lidke, Keith A.","raw_affiliation_strings":["Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":"https://orcid.org/0000-0002-9328-4318","affiliations":[{"raw_affiliation_string":"Department of Physics and Astronomy, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":true,"primary_topic":null,"topics":[],"keywords":[{"id":"https://openalex.org/keywords/microscope","display_name":"Microscope","score":0.6288999915122986},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.511900007724762},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4975999891757965},{"id":"https://openalex.org/keywords/microscopy","display_name":"Microscopy","score":0.444599986076355},{"id":"https://openalex.org/keywords/fluorescence-microscope","display_name":"Fluorescence microscope","score":0.3792000114917755},{"id":"https://openalex.org/keywords/software-package","display_name":"Software package","score":0.35190001130104065}],"concepts":[{"id":"https://openalex.org/C67649825","wikidata":"https://www.wikidata.org/wiki/Q196538","display_name":"Microscope","level":2,"score":0.6288999915122986},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.511900007724762},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4975999891757965},{"id":"https://openalex.org/C147080431","wikidata":"https://www.wikidata.org/wiki/Q1074953","display_name":"Microscopy","level":2,"score":0.444599986076355},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.4260999858379364},{"id":"https://openalex.org/C169274487","wikidata":"https://www.wikidata.org/wiki/Q840211","display_name":"Fluorescence microscope","level":3,"score":0.3792000114917755},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.3643999993801117},{"id":"https://openalex.org/C3020440742","wikidata":"https://www.wikidata.org/wiki/Q1176855","display_name":"Software package","level":3,"score":0.35190001130104065},{"id":"https://openalex.org/C2988765172","wikidata":"https://www.wikidata.org/wiki/Q22349898","display_name":"Control software","level":3,"score":0.3474999964237213},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3434000015258789},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.3357999920845032},{"id":"https://openalex.org/C2778517922","wikidata":"https://www.wikidata.org/wiki/Q7140482","display_name":"Particle (ecology)","level":2,"score":0.3287999927997589},{"id":"https://openalex.org/C133462117","wikidata":"https://www.wikidata.org/wiki/Q4929239","display_name":"Data collection","level":2,"score":0.31630000472068787},{"id":"https://openalex.org/C9417928","wikidata":"https://www.wikidata.org/wiki/Q1070689","display_name":"Image processing","level":3,"score":0.2782000005245209},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2752000093460083},{"id":"https://openalex.org/C163985040","wikidata":"https://www.wikidata.org/wiki/Q1172399","display_name":"Data acquisition","level":2,"score":0.2606000006198883}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.5281/zenodo.14681181","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.14681181","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.5281/zenodo.14681181","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.14681181","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"This":[0],"MATLAB-based":[1],"Instrument":[2],"Control":[3],"(MIC)":[4],"is":[5],"a":[6],"software":[7],"package":[8],"designed":[9],"to":[10],"facilitate":[11],"data":[12],"collection":[13],"for":[14],"custom-built":[15],"microscopes":[16],"with":[17],"an":[18],"emphasis":[19],"on":[20],"single":[21,27],"molecule":[22],"localization":[23],"microscopy":[24],"(SMLM)":[25],"and":[26],"particle":[28],"tracking":[29],"(SPT).":[30]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
