{"id":"https://openalex.org/W6929993148","doi":"https://doi.org/10.5281/zenodo.11618504","title":"Code for: Alternative Kernel Functions in Support Vector Machine Models Lead to Distinct Shapley Value Explanations of Compound Predictions that Decouple Feature Attribution and Model Interpretation","display_name":"Code for: Alternative Kernel Functions in Support Vector Machine Models Lead to Distinct Shapley Value Explanations of Compound Predictions that Decouple Feature Attribution and Model Interpretation","publication_year":2024,"publication_date":"2024-06-12","ids":{"openalex":"https://openalex.org/W6929993148","doi":"https://doi.org/10.5281/zenodo.11618504"},"language":"en","primary_location":{"id":"doi:10.5281/zenodo.11618504","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.11618504","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"ComputationalNotebook"},"type":"book","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.5281/zenodo.11618504","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Roth, Jannik Philipp","orcid":"https://orcid.org/0000-0001-6690-5601"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Roth, Jannik Philipp","raw_affiliation_strings":["Department of Life Science Informatics and Data Science, B-IT, LIMES Program Unit Chemical Biology and Medicinal Chemistry Rheinische Friedrich-Wilhelms-Universit\u00e4t Friedrich-Hirzebruch-Allee 5/6 53115 Bonn Germany"],"raw_orcid":"https://orcid.org/0000-0001-6690-5601","affiliations":[{"raw_affiliation_string":"Department of Life Science Informatics and Data Science, B-IT, LIMES Program Unit Chemical Biology and Medicinal Chemistry Rheinische Friedrich-Wilhelms-Universit\u00e4t Friedrich-Hirzebruch-Allee 5/6 53115 Bonn Germany","institution_ids":["https://openalex.org/I135140700"]}]},{"author_position":"last","author":{"id":null,"display_name":"Bajorath, J\u00fcrgen","orcid":"https://orcid.org/0000-0002-0557-5714"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Bajorath, J\u00fcrgen","raw_affiliation_strings":["Department of Life Science Informatics and Data Science, B-IT, LIMES Program Unit Chemical Biology and Medicinal Chemistry Rheinische Friedrich-Wilhelms-Universit\u00e4t Friedrich-Hirzebruch-Allee 5/6 53115 Bonn Germany"],"raw_orcid":"https://orcid.org/0000-0002-0557-5714","affiliations":[{"raw_affiliation_string":"Department of Life Science Informatics and Data Science, B-IT, LIMES Program Unit Chemical Biology and Medicinal Chemistry Rheinische Friedrich-Wilhelms-Universit\u00e4t Friedrich-Hirzebruch-Allee 5/6 53115 Bonn Germany","institution_ids":["https://openalex.org/I135140700"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I135140700"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.34279749,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":true,"primary_topic":{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.32350000739097595,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.32350000739097595,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10869","display_name":"Polysaccharides and Plant Cell Walls","score":0.05469999834895134,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10835","display_name":"Carbohydrate Chemistry and Synthesis","score":0.03200000151991844,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.5827000141143799},{"id":"https://openalex.org/keywords/kernel","display_name":"Kernel (algebra)","score":0.5776000022888184},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.5652999877929688},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5579000115394592},{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.5307000279426575},{"id":"https://openalex.org/keywords/hyperparameter","display_name":"Hyperparameter","score":0.5281000137329102},{"id":"https://openalex.org/keywords/interpretation","display_name":"Interpretation (philosophy)","score":0.49219998717308044},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4860000014305115},{"id":"https://openalex.org/keywords/kernel-method","display_name":"Kernel method","score":0.42739999294281006}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6327999830245972},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.5827000141143799},{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.5776000022888184},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.5652999877929688},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5579000115394592},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.5307000279426575},{"id":"https://openalex.org/C8642999","wikidata":"https://www.wikidata.org/wiki/Q4171168","display_name":"Hyperparameter","level":2,"score":0.5281000137329102},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5112000107765198},{"id":"https://openalex.org/C527412718","wikidata":"https://www.wikidata.org/wiki/Q855395","display_name":"Interpretation (philosophy)","level":2,"score":0.49219998717308044},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.48730000853538513},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4860000014305115},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4758000075817108},{"id":"https://openalex.org/C122280245","wikidata":"https://www.wikidata.org/wiki/Q620622","display_name":"Kernel method","level":3,"score":0.42739999294281006},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.4203999936580658},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.41999998688697815},{"id":"https://openalex.org/C2776291640","wikidata":"https://www.wikidata.org/wiki/Q2912517","display_name":"Value (mathematics)","level":2,"score":0.3962000012397766},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3619999885559082},{"id":"https://openalex.org/C2777093003","wikidata":"https://www.wikidata.org/wiki/Q6508345","display_name":"Lead (geology)","level":2,"score":0.3361000120639801},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3352000117301941},{"id":"https://openalex.org/C16910744","wikidata":"https://www.wikidata.org/wiki/Q7705759","display_name":"Test data","level":2,"score":0.30000001192092896},{"id":"https://openalex.org/C51632099","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Training set","level":2,"score":0.2955000102519989},{"id":"https://openalex.org/C143299363","wikidata":"https://www.wikidata.org/wiki/Q900584","display_name":"Attribution","level":2,"score":0.2921000123023987},{"id":"https://openalex.org/C101814296","wikidata":"https://www.wikidata.org/wiki/Q5439685","display_name":"Feature model","level":3,"score":0.2854999899864197},{"id":"https://openalex.org/C199022921","wikidata":"https://www.wikidata.org/wiki/Q240046","display_name":"Shapley value","level":3,"score":0.28110000491142273},{"id":"https://openalex.org/C169903167","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Test set","level":2,"score":0.26330000162124634},{"id":"https://openalex.org/C83665646","wikidata":"https://www.wikidata.org/wiki/Q42139305","display_name":"Feature vector","level":2,"score":0.2630999982357025},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.25859999656677246},{"id":"https://openalex.org/C55037315","wikidata":"https://www.wikidata.org/wiki/Q5421151","display_name":"Experimental data","level":2,"score":0.251800000667572}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.5281/zenodo.11618504","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.11618504","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"ComputationalNotebook"}],"best_oa_location":{"id":"doi:10.5281/zenodo.11618504","is_oa":true,"landing_page_url":"https://doi.org/10.5281/zenodo.11618504","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"ComputationalNotebook"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"The":[0,36,81],"following":[1],"repository":[2],"contains":[3,43,51,61,71],"the":[4,44,52,55,62,65,72,75,79],"results":[5,63],"and":[6,32,46,57],"analysis":[7],"as":[8,40],"presented":[9],"in":[10,14,68,78],"'Alternative":[11],"Kernel":[12],"Functions":[13],"Support":[15],"Vector":[16],"Machine":[17],"Models":[18],"Lead":[19],"to":[20],"Distinct":[21],"Shapley":[22],"Value":[23],"Explanations":[24],"of":[25,64],"Compound":[26],"Predictions":[27],"that":[28],"Decouple":[29],"Feature":[30],"Attribution":[31],"Model":[33],"Interpretation'":[34],"submitted":[35],"data":[37,49],"ist":[38],"structured":[39],"follows:":[41],"0_data/":[42],"training":[45],"test":[47],"set":[48],"1_optimization/":[50,69],"scripts":[53,66],"for":[54,74],"models":[56],"hyperparameter":[58],"optimization":[59],"2_optimization_output/":[60],"found":[67],"3_analysis/":[70],"code":[73,83],"figures":[76],"shown":[77],"manuscript":[80],"SVEKER":[82],"can":[84],"be":[85],"accessed":[86],"at:":[87],"https://github.com/jannik-roth/SVEKER":[88]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
