{"id":"https://openalex.org/W4407929882","doi":"https://doi.org/10.5220/0013189500003911","title":"Improving Antibody-Antigen Interaction Prediction Through Flexibility with ESMFold","display_name":"Improving Antibody-Antigen Interaction Prediction Through Flexibility with ESMFold","publication_year":2025,"publication_date":"2025-01-01","ids":{"openalex":"https://openalex.org/W4407929882","doi":"https://doi.org/10.5220/0013189500003911"},"language":"en","primary_location":{"id":"doi:10.5220/0013189500003911","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0013189500003911","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 18th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.5220/0013189500003911","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053987889","display_name":"Sara Joubbi","orcid":"https://orcid.org/0009-0002-1079-7204"},"institutions":[{"id":"https://openalex.org/I108290504","display_name":"University of Pisa","ror":"https://ror.org/03ad39j10","country_code":"IT","type":"education","lineage":["https://openalex.org/I108290504"]},{"id":"https://openalex.org/I4210121412","display_name":"Toscana Life Sciences","ror":"https://ror.org/01xze8742","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210121412"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Sara Joubbi","raw_affiliation_strings":["Data Science for Health Lab, Fondazione Toscana Life Sciences, Siena, Italy","Department of Computer Science, University of Pisa, Pisa, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Data Science for Health Lab, Fondazione Toscana Life Sciences, Siena, Italy","institution_ids":["https://openalex.org/I4210121412"]},{"raw_affiliation_string":"Department of Computer Science, University of Pisa, Pisa, Italy","institution_ids":["https://openalex.org/I108290504"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069198387","display_name":"Giuseppe Maccari","orcid":"https://orcid.org/0000-0002-2894-3583"},"institutions":[{"id":"https://openalex.org/I4210121412","display_name":"Toscana Life Sciences","ror":"https://ror.org/01xze8742","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210121412"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giuseppe Maccari","raw_affiliation_strings":["Data Science for Health Lab, Fondazione Toscana Life Sciences, Siena, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Data Science for Health Lab, Fondazione Toscana Life Sciences, Siena, Italy","institution_ids":["https://openalex.org/I4210121412"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065846066","display_name":"Giorgio Ciano","orcid":"https://orcid.org/0000-0003-2863-4315"},"institutions":[{"id":"https://openalex.org/I4210121412","display_name":"Toscana Life Sciences","ror":"https://ror.org/01xze8742","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210121412"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giorgio Ciano","raw_affiliation_strings":["Data Science for Health Lab, Fondazione Toscana Life Sciences, Siena, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Data Science for Health Lab, Fondazione Toscana Life Sciences, Siena, Italy","institution_ids":["https://openalex.org/I4210121412"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010923663","display_name":"Alessio Micheli","orcid":"https://orcid.org/0000-0001-5764-5238"},"institutions":[{"id":"https://openalex.org/I108290504","display_name":"University of Pisa","ror":"https://ror.org/03ad39j10","country_code":"IT","type":"education","lineage":["https://openalex.org/I108290504"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alessio Micheli","raw_affiliation_strings":["Department of Computer Science, University of Pisa, Pisa, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Pisa, Pisa, Italy","institution_ids":["https://openalex.org/I108290504"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038730637","display_name":"Paolo Milazzo","orcid":"https://orcid.org/0000-0002-7309-6424"},"institutions":[{"id":"https://openalex.org/I108290504","display_name":"University of Pisa","ror":"https://ror.org/03ad39j10","country_code":"IT","type":"education","lineage":["https://openalex.org/I108290504"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Paolo Milazzo","raw_affiliation_strings":["Department of Computer Science, University of Pisa, Pisa, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Pisa, Pisa, Italy","institution_ids":["https://openalex.org/I108290504"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5080423798","display_name":"Duccio Medini","orcid":null},"institutions":[{"id":"https://openalex.org/I4210121412","display_name":"Toscana Life Sciences","ror":"https://ror.org/01xze8742","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210121412"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Duccio Medini","raw_affiliation_strings":["Data Science for Health Lab, Fondazione Toscana Life Sciences, Siena, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Data Science for Health Lab, Fondazione Toscana Life Sciences, Siena, Italy","institution_ids":["https://openalex.org/I4210121412"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.0182,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.72660297,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"603","last_page":"610"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9785000085830688,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10755","display_name":"HER2/EGFR in Cancer Research","score":0.9782999753952026,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6141063570976257},{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.48809540271759033},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.45435914397239685},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.43164923787117004},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.2144259512424469},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12778401374816895},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.12582087516784668},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.10697305202484131}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6141063570976257},{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.48809540271759033},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.45435914397239685},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.43164923787117004},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.2144259512424469},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12778401374816895},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.12582087516784668},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.10697305202484131}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.5220/0013189500003911","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0013189500003911","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 18th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},{"id":"pmh:oai:arpi.unipi.it:11568/1313430","is_oa":false,"landing_page_url":"https://hdl.handle.net/11568/1313430","pdf_url":null,"source":{"id":"https://openalex.org/S4377196265","display_name":"CINECA IRIS Institutial research information system (University of Pisa)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I108290504","host_organization_name":"University of Pisa","host_organization_lineage":["https://openalex.org/I108290504"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":{"id":"doi:10.5220/0013189500003911","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0013189500003911","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 18th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
