{"id":"https://openalex.org/W2793358689","doi":"https://doi.org/10.5220/0006722801960200","title":"ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes","display_name":"ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2793358689","doi":"https://doi.org/10.5220/0006722801960200","mag":"2793358689"},"language":"en","primary_location":{"id":"doi:10.5220/0006722801960200","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0006722801960200","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.5220/0006722801960200","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018643221","display_name":"Askarbek Orakov","orcid":"https://orcid.org/0000-0001-6823-5269"},"institutions":[{"id":"https://openalex.org/I60559429","display_name":"Nazarbayev University","ror":"https://ror.org/052bx8q98","country_code":"KZ","type":"education","lineage":["https://openalex.org/I60559429"]},{"id":"https://openalex.org/I142637625","display_name":"Okinawa Institute of Science and Technology Graduate University","ror":"https://ror.org/02qg15b79","country_code":"JP","type":"education","lineage":["https://openalex.org/I142637625"]}],"countries":["JP","KZ"],"is_corresponding":true,"raw_author_name":"Askarbek Orakov","raw_affiliation_strings":["Okinawa Institute of Science and Technology and  Nazarbayev University, Japan","Okinawa Institute of Science and Technology and Nazarbayev University, Japan","School of Science and Technology, Nazarbayev University, Astana, Kazakhstan"],"affiliations":[{"raw_affiliation_string":"Okinawa Institute of Science and Technology and  Nazarbayev University, Japan","institution_ids":["https://openalex.org/I142637625"]},{"raw_affiliation_string":"Okinawa Institute of Science and Technology and Nazarbayev University, Japan","institution_ids":["https://openalex.org/I142637625"]},{"raw_affiliation_string":"School of Science and Technology, Nazarbayev University, Astana, Kazakhstan","institution_ids":["https://openalex.org/I60559429"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080946067","display_name":"Nazgul Sakenova","orcid":"https://orcid.org/0000-0003-0310-1096"},"institutions":[{"id":"https://openalex.org/I142637625","display_name":"Okinawa Institute of Science and Technology Graduate University","ror":"https://ror.org/02qg15b79","country_code":"JP","type":"education","lineage":["https://openalex.org/I142637625"]},{"id":"https://openalex.org/I60559429","display_name":"Nazarbayev University","ror":"https://ror.org/052bx8q98","country_code":"KZ","type":"education","lineage":["https://openalex.org/I60559429"]}],"countries":["JP","KZ"],"is_corresponding":false,"raw_author_name":"Nazgul Sakenova","raw_affiliation_strings":["Okinawa Institute of Science and Technology and  Nazarbayev University, Japan","Okinawa Institute of Science and Technology and Nazarbayev University, Japan","School of Science and Technology, Nazarbayev University, Astana, Kazakhstan"],"affiliations":[{"raw_affiliation_string":"Okinawa Institute of Science and Technology and  Nazarbayev University, Japan","institution_ids":["https://openalex.org/I142637625"]},{"raw_affiliation_string":"Okinawa Institute of Science and Technology and Nazarbayev University, Japan","institution_ids":["https://openalex.org/I142637625"]},{"raw_affiliation_string":"School of Science and Technology, Nazarbayev University, Astana, Kazakhstan","institution_ids":["https://openalex.org/I60559429"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082079518","display_name":"Igor Goryanin","orcid":"https://orcid.org/0000-0002-8293-774X"},"institutions":[{"id":"https://openalex.org/I142637625","display_name":"Okinawa Institute of Science and Technology Graduate University","ror":"https://ror.org/02qg15b79","country_code":"JP","type":"education","lineage":["https://openalex.org/I142637625"]},{"id":"https://openalex.org/I4210139473","display_name":"Tianjin Institute of Industrial Biotechnology","ror":"https://ror.org/042pyga86","country_code":"CN","type":"nonprofit","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210139473"]},{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["CN","GB","JP"],"is_corresponding":false,"raw_author_name":"Igor Goryanin","raw_affiliation_strings":["Tianjin Institute of Industrial Biotechnology, University of Edinburgh and Okinawa Institute of Science and Technology, China","Okinawa Institute of Science and Technology, Onna-son, Japan","University of Edinburgh, School of Informatics, Edinburgh, United Kingdom"],"affiliations":[{"raw_affiliation_string":"Tianjin Institute of Industrial Biotechnology, University of Edinburgh and Okinawa Institute of Science and Technology, China","institution_ids":["https://openalex.org/I4210139473"]},{"raw_affiliation_string":"Okinawa Institute of Science and Technology, Onna-son, Japan","institution_ids":["https://openalex.org/I142637625"]},{"raw_affiliation_string":"University of Edinburgh, School of Informatics, Edinburgh, United Kingdom","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020746275","display_name":"Anatoly Sorokin","orcid":"https://orcid.org/0000-0002-0047-0606"},"institutions":[{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I4210155801","display_name":"Institute of Cell Biophysics","ror":"https://ror.org/05gbnpz65","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210129690","https://openalex.org/I4210155801"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Anatoly Sorokin","raw_affiliation_strings":["Institute of Cell Biophysics RAS and Moscow Institute of Physics and Technology, Russian Federation","Institute of Cell Biophysics RAS, Pushchino, Russia"],"affiliations":[{"raw_affiliation_string":"Institute of Cell Biophysics RAS and Moscow Institute of Physics and Technology, Russian Federation","institution_ids":["https://openalex.org/I4210155801","https://openalex.org/I153845743"]},{"raw_affiliation_string":"Institute of Cell Biophysics RAS, Pushchino, Russia","institution_ids":["https://openalex.org/I4210155801"]}]}],"institutions":[],"countries_distinct_count":5,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5018643221"],"corresponding_institution_ids":["https://openalex.org/I142637625","https://openalex.org/I60559429"],"apc_list":null,"apc_paid":null,"fwci":0.0919,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.45425943,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"196","last_page":"200"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.4805000126361847,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.4805000126361847,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.45750001072883606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.40700000524520874,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7004145383834839},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5298442840576172},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3351236581802368}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7004145383834839},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5298442840576172},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3351236581802368}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.5220/0006722801960200","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0006722801960200","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},{"id":"pmh:oai:pure.ed.ac.uk:openaire/9447cedc-79cc-4579-a192-12cd20fb2a23","is_oa":true,"landing_page_url":"https://www.research.ed.ac.uk/en/publications/9447cedc-79cc-4579-a192-12cd20fb2a23","pdf_url":null,"source":{"id":"https://openalex.org/S4406922455","display_name":"Edinburgh Research Explorer","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Orakov, A, Sakenova, N, Goryanin, I & Sorokin, A 2018, ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes. in Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 4: BIOINFORMATICS. Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies, vol. 3, Madeira, Portugal, pp. 196-200, The 11th International Joint Conference on Biomedical Engineering Systems and Technologies, Funchal, Portugal, 19/01/18. https://doi.org/10.5220/0006722801960200","raw_type":"contributionToPeriodical"},{"id":"pmh:oai:pure.ed.ac.uk:publications/9447cedc-79cc-4579-a192-12cd20fb2a23","is_oa":false,"landing_page_url":"http://www.scitepress.org/DigitalLibrary/PublicationsDetail.aspx?ID=cHY7qo5EgRE=&t=1","pdf_url":null,"source":{"id":"https://openalex.org/S4406922455","display_name":"Edinburgh Research Explorer","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""}],"best_oa_location":{"id":"doi:10.5220/0006722801960200","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0006722801960200","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1810028515","https://openalex.org/W1975614809","https://openalex.org/W2110256992","https://openalex.org/W2141224543","https://openalex.org/W2142428670","https://openalex.org/W2337747100","https://openalex.org/W2409427249","https://openalex.org/W2582743722","https://openalex.org/W2762235753","https://openalex.org/W2774388828","https://openalex.org/W2951176108","https://openalex.org/W2953312541","https://openalex.org/W4399570526","https://openalex.org/W4399583953","https://openalex.org/W4399638148","https://openalex.org/W4399649500","https://openalex.org/W4399650795"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2350741829","https://openalex.org/W2530322880","https://openalex.org/W1596801655","https://openalex.org/W2359140296"],"abstract_inverted_index":{"The":[0],"functional":[1],"and":[2,33,49,54,67],"taxonomic":[3],"analysis":[4,22,56],"is":[5],"the":[6,11,15,30,46,50,58],"critical":[7],"step":[8],"in":[9,43],"understanding":[10],"interspecies":[12],"interaction":[13],"within":[14],"microbial":[16],"communities.":[17],"Currently,":[18],"these":[19],"types":[20],"of":[21,29,57],"are":[23],"run":[24],"independently,":[25],"which":[26],"makes":[27],"interpretation":[28],"results":[31],"hard":[32],"error-prone.":[34],"Here":[35],"we":[36],"present":[37],"ASAR":[38],"(Advanced":[39],"metagenomic":[40,59],"Sequence":[41],"Analysis":[42],"R)":[44],"Database,":[45],"interactive":[47],"tool":[48],"databases":[51],"for":[52],"storage":[53],"exploratory":[55],"sequencing":[60],"data":[61],"along":[62],"three":[63],"dimensions:":[64],"taxonomy,":[65],"function,":[66],"environmental":[68],"conditions.":[69]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
