{"id":"https://openalex.org/W2594664186","doi":"https://doi.org/10.5220/0006174501760183","title":"Consensus Clustering for Cancer Gene Expression Data - Large-Scale Analysis using Evidence Accumulation Approach","display_name":"Consensus Clustering for Cancer Gene Expression Data - Large-Scale Analysis using Evidence Accumulation Approach","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2594664186","doi":"https://doi.org/10.5220/0006174501760183","mag":"2594664186"},"language":"en","primary_location":{"id":"doi:10.5220/0006174501760183","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0006174501760183","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 10th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.5220/0006174501760183","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005972793","display_name":"Isidora \u0160a\u0161i\u0107","orcid":null},"institutions":[{"id":"https://openalex.org/I170726198","display_name":"University of Novi Sad","ror":"https://ror.org/00xa57a59","country_code":"RS","type":"education","lineage":["https://openalex.org/I170726198"]}],"countries":["RS"],"is_corresponding":true,"raw_author_name":"Isidora \u0160a\u0161i\u0107","raw_affiliation_strings":["University of Novi Sad, Serbia","Faculty of Technical Sciences,University of Novi Sad, Novi Sad, Serbia"],"affiliations":[{"raw_affiliation_string":"University of Novi Sad, Serbia","institution_ids":["https://openalex.org/I170726198"]},{"raw_affiliation_string":"Faculty of Technical Sciences,University of Novi Sad, Novi Sad, Serbia","institution_ids":["https://openalex.org/I170726198"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077675949","display_name":"Sanja Brdar","orcid":"https://orcid.org/0000-0002-2259-4693"},"institutions":[{"id":"https://openalex.org/I4210154960","display_name":"BioSense Institute","ror":"https://ror.org/04qn48008","country_code":"RS","type":"facility","lineage":["https://openalex.org/I4210154960"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Sanja Brdar","raw_affiliation_strings":["BioSense Institute, Serbia"],"affiliations":[{"raw_affiliation_string":"BioSense Institute, Serbia","institution_ids":["https://openalex.org/I4210154960"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003713136","display_name":"Tatjana Lon\u010dar-Turukalo","orcid":"https://orcid.org/0000-0002-3582-8073"},"institutions":[{"id":"https://openalex.org/I170726198","display_name":"University of Novi Sad","ror":"https://ror.org/00xa57a59","country_code":"RS","type":"education","lineage":["https://openalex.org/I170726198"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Tatjana Lon\u010dar-Turukalo","raw_affiliation_strings":["University of Novi Sad, Serbia","Faculty of Technical Sciences,University of Novi Sad, Novi Sad, Serbia"],"affiliations":[{"raw_affiliation_string":"University of Novi Sad, Serbia","institution_ids":["https://openalex.org/I170726198"]},{"raw_affiliation_string":"Faculty of Technical Sciences,University of Novi Sad, Novi Sad, Serbia","institution_ids":["https://openalex.org/I170726198"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065532278","display_name":"Helena Aidos","orcid":"https://orcid.org/0000-0001-6827-4217"},"institutions":[{"id":"https://openalex.org/I4210120471","display_name":"Instituto de Telecomunica\u00e7\u00f5es","ror":"https://ror.org/02ht4fk33","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210120471"]},{"id":"https://openalex.org/I4387152517","display_name":"Instituto Superior T\u00e9cnico","ror":"https://ror.org/03db2by73","country_code":null,"type":"education","lineage":["https://openalex.org/I141596103","https://openalex.org/I4387152517"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Helena Aidos","raw_affiliation_strings":["Instituto Superior Tecnico, Portugal","Instituto de Telecomunicacoes, Instituto Superior Tecnico, Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"Instituto Superior Tecnico, Portugal","institution_ids":["https://openalex.org/I4387152517"]},{"raw_affiliation_string":"Instituto de Telecomunicacoes, Instituto Superior Tecnico, Lisbon, Portugal","institution_ids":["https://openalex.org/I4210120471","https://openalex.org/I4387152517"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029045681","display_name":"Ana Fred","orcid":"https://orcid.org/0000-0003-1320-5024"},"institutions":[{"id":"https://openalex.org/I4210120471","display_name":"Instituto de Telecomunica\u00e7\u00f5es","ror":"https://ror.org/02ht4fk33","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210120471"]},{"id":"https://openalex.org/I4387152517","display_name":"Instituto Superior T\u00e9cnico","ror":"https://ror.org/03db2by73","country_code":null,"type":"education","lineage":["https://openalex.org/I141596103","https://openalex.org/I4387152517"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Ana Fred","raw_affiliation_strings":["Instituto Superior Tecnico, Portugal","Instituto de Telecomunicacoes, Instituto Superior Tecnico, Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"Instituto Superior Tecnico, Portugal","institution_ids":["https://openalex.org/I4387152517"]},{"raw_affiliation_string":"Instituto de Telecomunicacoes, Instituto Superior Tecnico, Lisbon, Portugal","institution_ids":["https://openalex.org/I4210120471","https://openalex.org/I4387152517"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5005972793"],"corresponding_institution_ids":["https://openalex.org/I170726198"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.01954702,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"176","last_page":"183"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9277999997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.6389463543891907},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5375131964683533},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.5210615992546082},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.42926299571990967},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4263794422149658},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37210091948509216},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.25678032636642456},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21920347213745117},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.1288207471370697},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.06891021132469177}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.6389463543891907},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5375131964683533},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.5210615992546082},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.42926299571990967},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4263794422149658},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37210091948509216},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.25678032636642456},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21920347213745117},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.1288207471370697},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.06891021132469177}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.5220/0006174501760183","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0006174501760183","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 10th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},{"id":"pmh:oai:zenodo.org:4005799","is_oa":true,"landing_page_url":"https://zenodo.org/record/4005799","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/conferencePaper"}],"best_oa_location":{"id":"doi:10.5220/0006174501760183","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0006174501760183","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 10th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1981849943","https://openalex.org/W2011430131","https://openalex.org/W2039849619","https://openalex.org/W2056780622","https://openalex.org/W2100022944","https://openalex.org/W2109363337","https://openalex.org/W2111171370","https://openalex.org/W2111596024","https://openalex.org/W2118769864","https://openalex.org/W2139280638","https://openalex.org/W2147246240","https://openalex.org/W2150593711","https://openalex.org/W2156031219","https://openalex.org/W2157840751","https://openalex.org/W2170584976","https://openalex.org/W4244030505","https://openalex.org/W4245436919","https://openalex.org/W4298304654"],"related_works":["https://openalex.org/W2804364458","https://openalex.org/W4298130764","https://openalex.org/W2132641928","https://openalex.org/W4310225030","https://openalex.org/W2090259340","https://openalex.org/W2083665254","https://openalex.org/W2393816671","https://openalex.org/W1926736923","https://openalex.org/W2942177010","https://openalex.org/W2158836806"],"abstract_inverted_index":{"Clustering":[0],"algorithms":[1],"are":[2],"extensively":[3],"used":[4,176],"on":[5,55,76,133],"patient":[6],"tissue":[7],"samples":[8],"in":[9,105,170],"order":[10],"to":[11,63,85,136,146,160,177],"group":[12],"and":[13,21,50,81,117,183],"visualize":[14],"the":[15,26,29,65,68,87,91,109,120,134,147,153,179,185],"microarray":[16,92],"data.":[17],"The":[18,94],"high":[19],"dimensionality":[20],"probe":[22],"specific":[23],"noise":[24],"make":[25],"selection":[27],"of":[28,42,67,90,112,181],"appropriate":[30],"clustering":[31,44,48,53,69,140,182],"algorithm":[32,99],"an":[33],"uneasy":[34],"task.":[35],"This":[36],"study":[37,95],"presents":[38],"a":[39],"large-scale":[40],"analysis":[41,73],"three":[43],"algorithms:":[45],"k-means,":[46],"hierarchical":[47],"(HC)":[49],"evidence":[51],"accumulation":[52],"(EAC)":[54],"thirty-five":[56],"cancer":[57],"gene":[58],"expression":[59],"data":[60,77,186],"sets":[61,78],"selected":[62],"benchmark":[64],"performance":[66,72],"algorithms.":[70],"Separated":[71],"was":[74],"done":[75],"from":[79],"Affymetrix":[80],"cDNA":[82],"chip":[83],"platforms":[84],"examine":[86],"possible":[88],"influence":[89],"technology.":[93],"revealed":[96],"no":[97,158],"consistent":[98],"ranking":[100],"can":[101],"be":[102,175],"inferred,":[103],"though":[104],"general":[106],"EAC":[107,173],"presented":[108],"best":[110],"compromise":[111],"adjusted":[113],"rand":[114],"index":[115],"(ARI)":[116],"variance.":[118],"However,":[119,163],"results":[121],"indicated":[122],"that":[123],"ARI":[124,169],"variance":[125],"under":[126,164],"repeated":[127,143,171],"k-means":[128],"initializations":[129],"offers":[130],"useful":[131],"information":[132],"need":[135,159],"implement":[137],"more":[138],"complex":[139],"techniques.":[141],"If":[142],"K-means":[144],"converges":[145],"same":[148],"partition,":[149],"also":[150],"confirmed":[151],"by":[152],"HC":[154],"clustering,":[155],"there":[156],"is":[157],"run":[161],"EAC.":[162],"moderate":[165],"or":[166],"highly":[167],"variable":[168],"K-means,":[172],"should":[174],"reduce":[178],"uncertainty":[180],"unveil":[184],"structure.":[187]},"counts_by_year":[],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
