{"id":"https://openalex.org/W2592723117","doi":"https://doi.org/10.5220/0006149100920099","title":"Automated Cell Segmentation of Fission Yeast Phase Images - Segmenting Cells from Light Microscopy Images","display_name":"Automated Cell Segmentation of Fission Yeast Phase Images - Segmenting Cells from Light Microscopy Images","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2592723117","doi":"https://doi.org/10.5220/0006149100920099","mag":"2592723117"},"language":"en","primary_location":{"id":"doi:10.5220/0006149100920099","is_oa":false,"landing_page_url":"https://doi.org/10.5220/0006149100920099","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 10th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028520267","display_name":"Jennifer L. O\u2019Brien","orcid":"https://orcid.org/0000-0001-8227-6788"},"institutions":[{"id":"https://openalex.org/I20581793","display_name":"University of Kent","ror":"https://ror.org/00xkeyj56","country_code":"GB","type":"education","lineage":["https://openalex.org/I20581793"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Jennifer O'Brien","raw_affiliation_strings":["University of Kent, United Kingdom"],"affiliations":[{"raw_affiliation_string":"University of Kent, United Kingdom","institution_ids":["https://openalex.org/I20581793"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082689217","display_name":"Sanaul Hoque","orcid":"https://orcid.org/0000-0001-8627-3429"},"institutions":[{"id":"https://openalex.org/I20581793","display_name":"University of Kent","ror":"https://ror.org/00xkeyj56","country_code":"GB","type":"education","lineage":["https://openalex.org/I20581793"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Sanaul Hoque","raw_affiliation_strings":["University of Kent, United Kingdom"],"affiliations":[{"raw_affiliation_string":"University of Kent, United Kingdom","institution_ids":["https://openalex.org/I20581793"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050322482","display_name":"Daniel P. Mulvihill","orcid":"https://orcid.org/0000-0003-2502-5274"},"institutions":[{"id":"https://openalex.org/I20581793","display_name":"University of Kent","ror":"https://ror.org/00xkeyj56","country_code":"GB","type":"education","lineage":["https://openalex.org/I20581793"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Daniel Mulvihill","raw_affiliation_strings":["University of Kent, United Kingdom"],"affiliations":[{"raw_affiliation_string":"University of Kent, United Kingdom","institution_ids":["https://openalex.org/I20581793"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055586446","display_name":"Konstantinos Sirlantzis","orcid":"https://orcid.org/0000-0002-0847-8880"},"institutions":[{"id":"https://openalex.org/I20581793","display_name":"University of Kent","ror":"https://ror.org/00xkeyj56","country_code":"GB","type":"education","lineage":["https://openalex.org/I20581793"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Konstantinos Sirlantzis","raw_affiliation_strings":["University of Kent, United Kingdom"],"affiliations":[{"raw_affiliation_string":"University of Kent, United Kingdom","institution_ids":["https://openalex.org/I20581793"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5028520267"],"corresponding_institution_ids":["https://openalex.org/I20581793"],"apc_list":null,"apc_paid":null,"fwci":1.2263,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.84911481,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"92","last_page":"99"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7859699726104736},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.7786697149276733},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6331708431243896},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.6308112740516663},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5958143472671509},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5433531403541565},{"id":"https://openalex.org/keywords/optical-microscope","display_name":"Optical microscope","score":0.5081324577331543},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.4988722801208496},{"id":"https://openalex.org/keywords/microscopy","display_name":"Microscopy","score":0.4952503740787506},{"id":"https://openalex.org/keywords/fission","display_name":"Fission","score":0.44932231307029724},{"id":"https://openalex.org/keywords/schizosaccharomyces","display_name":"Schizosaccharomyces","score":0.43783971667289734},{"id":"https://openalex.org/keywords/microscope","display_name":"Microscope","score":0.42742544412612915},{"id":"https://openalex.org/keywords/yeast","display_name":"Yeast","score":0.3817751705646515},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.34442389011383057},{"id":"https://openalex.org/keywords/schizosaccharomyces-pombe","display_name":"Schizosaccharomyces pombe","score":0.3415184020996094},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.21753257513046265},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17798563838005066},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.10118377208709717},{"id":"https://openalex.org/keywords/saccharomyces-cerevisiae","display_name":"Saccharomyces cerevisiae","score":0.09766426682472229}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7859699726104736},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.7786697149276733},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6331708431243896},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.6308112740516663},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5958143472671509},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5433531403541565},{"id":"https://openalex.org/C77017923","wikidata":"https://www.wikidata.org/wiki/Q912313","display_name":"Optical microscope","level":3,"score":0.5081324577331543},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.4988722801208496},{"id":"https://openalex.org/C147080431","wikidata":"https://www.wikidata.org/wiki/Q1074953","display_name":"Microscopy","level":2,"score":0.4952503740787506},{"id":"https://openalex.org/C12294094","wikidata":"https://www.wikidata.org/wiki/Q929080","display_name":"Fission","level":3,"score":0.44932231307029724},{"id":"https://openalex.org/C2776519988","wikidata":"https://www.wikidata.org/wiki/Q1317935","display_name":"Schizosaccharomyces","level":5,"score":0.43783971667289734},{"id":"https://openalex.org/C67649825","wikidata":"https://www.wikidata.org/wiki/Q196538","display_name":"Microscope","level":2,"score":0.42742544412612915},{"id":"https://openalex.org/C2779222958","wikidata":"https://www.wikidata.org/wiki/Q45422","display_name":"Yeast","level":2,"score":0.3817751705646515},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.34442389011383057},{"id":"https://openalex.org/C2779429346","wikidata":"https://www.wikidata.org/wiki/Q2236682","display_name":"Schizosaccharomyces pombe","level":4,"score":0.3415184020996094},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.21753257513046265},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17798563838005066},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.10118377208709717},{"id":"https://openalex.org/C2777576037","wikidata":"https://www.wikidata.org/wiki/Q719725","display_name":"Saccharomyces cerevisiae","level":3,"score":0.09766426682472229},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C152568617","wikidata":"https://www.wikidata.org/wiki/Q2348","display_name":"Neutron","level":2,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C26771246","wikidata":"https://www.wikidata.org/wiki/Q321095","display_name":"Scanning electron microscope","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.5220/0006149100920099","is_oa":false,"landing_page_url":"https://doi.org/10.5220/0006149100920099","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 10th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},{"id":"pmh:oai:kar.kent.ac.uk:63353","is_oa":false,"landing_page_url":"https://kar.kent.ac.uk/63353/","pdf_url":null,"source":{"id":"https://openalex.org/S4377196264","display_name":"Kent Academic Repository (University of Kent)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20581793","host_organization_name":"University of Kent","host_organization_lineage":["https://openalex.org/I20581793"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Book section"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W66676843","https://openalex.org/W2145215626","https://openalex.org/W1984268414","https://openalex.org/W2032125488","https://openalex.org/W2491614788","https://openalex.org/W1865553109","https://openalex.org/W2095805951","https://openalex.org/W4254772548","https://openalex.org/W2056230208","https://openalex.org/W1533149670"],"abstract_inverted_index":{"Robust":[0],"image":[1],"analysis":[2],"is":[3,56],"an":[4,20,43],"important":[5],"aspect":[6],"of":[7,14,22,49,53,63,66,93],"all":[8],"cell":[9],"biology":[10],"studies.":[11],"The":[12],"geometrics":[13],"cells":[15,87],"are":[16,38],"critical":[17],"for":[18,86],"developing":[19],"understanding":[21],"biological":[23],"processes.":[24],"Time":[25],"constraints":[26],"placed":[27],"on":[28,35],"researchers":[29],"lead":[30],"to":[31,69],"a":[32,47,80,89],"narrower":[33],"focus":[34],"what":[36],"data":[37],"collected":[39],"and":[40,61],"recorded":[41],"from":[42],"experiment,":[44],"resulting":[45],"in":[46],"loss":[48],"data.":[50],"Currently,":[51],"preprocessing":[52],"microscope":[54],"images":[55],"followed":[57],"by":[58],"the":[59,73,99],"utilisation":[60],"parameterisation":[62],"inbuilt":[64],"functions":[65],"various":[67],"softwares":[68],"obtain":[70],"information.":[71],"Using":[72],"fission":[74],"yeast,":[75],"Schizosaccharomyes":[76],"pombe,":[77],"we":[78],"propose":[79],"novel,":[81],"fully":[82],"automated,":[83],"segmentation":[84,94],"software":[85],"with":[88,98],"significantly":[90],"lower":[91],"rate":[92],"errors":[95],"than":[96],"PombeX":[97],"same":[100],"dataset.":[101]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
