{"id":"https://openalex.org/W2343431987","doi":"https://doi.org/10.5220/0005778700920103","title":"On the Impact of Granularity in Extracting Knowledge from Bioinformatics Data","display_name":"On the Impact of Granularity in Extracting Knowledge from Bioinformatics Data","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2343431987","doi":"https://doi.org/10.5220/0005778700920103","mag":"2343431987"},"language":"en","primary_location":{"id":"doi:10.5220/0005778700920103","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0005778700920103","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.5220/0005778700920103","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088290341","display_name":"Sean West","orcid":"https://orcid.org/0000-0002-1394-1999"},"institutions":[{"id":"https://openalex.org/I122266389","display_name":"University of Nebraska at Omaha","ror":"https://ror.org/04yrkc140","country_code":"US","type":"education","lineage":["https://openalex.org/I122266389"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sean West","raw_affiliation_strings":["University of Nebraska at Omaha, United States"],"affiliations":[{"raw_affiliation_string":"University of Nebraska at Omaha, United States","institution_ids":["https://openalex.org/I122266389"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047703641","display_name":"Hesham Ali","orcid":"https://orcid.org/0000-0001-6675-7987"},"institutions":[{"id":"https://openalex.org/I122266389","display_name":"University of Nebraska at Omaha","ror":"https://ror.org/04yrkc140","country_code":"US","type":"education","lineage":["https://openalex.org/I122266389"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hesham Ali","raw_affiliation_strings":["University of Nebraska at Omaha, United States"],"affiliations":[{"raw_affiliation_string":"University of Nebraska at Omaha, United States","institution_ids":["https://openalex.org/I122266389"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5088290341"],"corresponding_institution_ids":["https://openalex.org/I122266389"],"apc_list":null,"apc_paid":null,"fwci":0.1667,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.62107508,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"92","last_page":"103"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9735000133514404,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/granularity","display_name":"Granularity","score":0.8238257169723511},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7787250280380249},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.697050154209137},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.6060404181480408},{"id":"https://openalex.org/keywords/data-type","display_name":"Data type","score":0.5810157060623169},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.5756597518920898},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.525800883769989},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.5166557431221008},{"id":"https://openalex.org/keywords/analytics","display_name":"Analytics","score":0.4956585168838501},{"id":"https://openalex.org/keywords/data-quality","display_name":"Data quality","score":0.4857407212257385},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.4732309579849243},{"id":"https://openalex.org/keywords/data-modeling","display_name":"Data modeling","score":0.4577334225177765},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.44773900508880615},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.22007879614830017},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.13940957188606262},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.11036679148674011}],"concepts":[{"id":"https://openalex.org/C177774035","wikidata":"https://www.wikidata.org/wiki/Q1246948","display_name":"Granularity","level":2,"score":0.8238257169723511},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7787250280380249},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.697050154209137},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.6060404181480408},{"id":"https://openalex.org/C138958017","wikidata":"https://www.wikidata.org/wiki/Q190087","display_name":"Data type","level":2,"score":0.5810157060623169},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.5756597518920898},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.525800883769989},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.5166557431221008},{"id":"https://openalex.org/C79158427","wikidata":"https://www.wikidata.org/wiki/Q485396","display_name":"Analytics","level":2,"score":0.4956585168838501},{"id":"https://openalex.org/C24756922","wikidata":"https://www.wikidata.org/wiki/Q1757694","display_name":"Data quality","level":3,"score":0.4857407212257385},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.4732309579849243},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.4577334225177765},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.44773900508880615},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.22007879614830017},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.13940957188606262},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.11036679148674011},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.5220/0005778700920103","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0005778700920103","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.5220/0005778700920103","is_oa":true,"landing_page_url":"https://doi.org/10.5220/0005778700920103","pdf_url":null,"source":null,"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies","raw_type":"proceedings-article"},"sustainable_development_goals":[{"score":0.47999998927116394,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W372138008","https://openalex.org/W2307569040","https://openalex.org/W2366067673","https://openalex.org/W2131941936","https://openalex.org/W2060096282","https://openalex.org/W2541393756","https://openalex.org/W2887634402","https://openalex.org/W2385643360","https://openalex.org/W4237581822","https://openalex.org/W4285502407"],"abstract_inverted_index":{"With":[0],"the":[1,15,18,30,61,129,133,180,201,211,216,222],"rapidly":[2],"increasing":[3],"amount":[4],"of":[5,8,17,32,51,63,71,128,182,192,203,218],"various":[6,69,190],"types":[7,50,70,191],"biological":[9,52,146,193],"data":[10,27,36,65,72,79,110,141,147,172,185,194],"currently":[11],"available":[12],"to":[13,42,59,75,91,124,144,161,188],"researchers,":[14],"focus":[16,43],"biomedical":[19],"research":[20],"community":[21],"has":[22],"been":[23,57],"shifting":[24],"from":[25,132,149,168,205,221],"pure":[26],"generation":[28],"towards":[29,107],"development":[31],"new":[33],"methodologies":[34,120],"for":[35,47,78,195],"analytics.":[37],"Although":[38],"many":[39,84],"researchers":[40],"continue":[41],"on":[44],"approaches":[45],"developed":[46],"analyzing":[48],"single":[49],"data,":[53],"recent":[54],"attempts":[55,88],"have":[56],"made":[58],"utilize":[60],"availability":[62],"heterogeneous":[64],"sets":[66],"that":[67,117,163],"contain":[68],"and":[73,81,153,178,210],"try":[74],"establish":[76],"tools":[77],"integration":[80,119,142],"analysis":[82],"in":[83,94,112],"bioinformatics":[85],"applications.":[86],"Such":[87],"are":[89,121],"expected":[90],"increase":[92],"significantly":[93,214],"this":[95,99,137],"coming":[96],"decade.":[97],"While":[98],"can":[100,166],"be":[101],"viewed":[102],"as":[103],"a":[104,159,206],"positive":[105],"step":[106],"advancing":[108],"big":[109],"analytics":[111],"bioinformatics,":[113],"it":[114],"is":[115],"critical":[116],"these":[118],"meticulously":[122],"studied":[123],"ensure":[125],"high":[126],"quality":[127,217],"knowledge":[130,219],"extracted":[131,220],"integrated":[134,223],"data.":[135,156,224],"In":[136],"work,":[138],"we":[139,199],"employ":[140],"methods":[143],"analyze":[145],"obtained":[148,173],"protein":[150],"interaction":[151],"networks":[152],"gene":[154],"expression":[155],"We":[157],"conduct":[158],"study":[160],"show":[162],"potential":[164],"problems":[165],"arise":[167],"integrating":[169],"or":[170],"fusing":[171,186],"at":[174],"different":[175],"granularity":[176,204,212],"levels":[177,213],"highlight":[179],"importance":[181],"developing":[183],"advanced":[184],"techniques":[187],"integrate":[189],"analytical":[196],"purposes.":[197],"Further,":[198],"explore":[200],"impact":[202,215],"more":[207],"formulized":[208],"approach":[209]},"counts_by_year":[{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}