{"id":"https://openalex.org/W7165878574","doi":"https://doi.org/10.48550/arxiv.2606.25579","title":"Cross-Attention Multimodal Learning for Predicting Response to Neoadjuvant Imatinib in Gastrointestinal Stromal Tumors: A Multicenter Retrospective Study","display_name":"Cross-Attention Multimodal Learning for Predicting Response to Neoadjuvant Imatinib in Gastrointestinal Stromal Tumors: A Multicenter Retrospective Study","publication_year":2026,"publication_date":"2026-06-24","ids":{"openalex":"https://openalex.org/W7165878574","doi":"https://doi.org/10.48550/arxiv.2606.25579"},"language":null,"primary_location":{"id":"doi:10.48550/arxiv.2606.25579","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2606.25579","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"},"type":"preprint","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.48550/arxiv.2606.25579","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5139360426","display_name":"Fariba Tohidinezhad","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tohidinezhad, Fariba","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093925761","display_name":"Douwe J. Spaanderman","orcid":"https://orcid.org/0000-0001-8397-2339"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Spaanderman, Douwe J.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5133366179","display_name":"Natalia Oviedo Acosta","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Acosta, Natalia Oviedo","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059739238","display_name":"Kaouther Mouheb","orcid":"https://orcid.org/0000-0002-8991-9405"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mouheb, Kaouther","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062591725","display_name":"Karthik Prathaban","orcid":"https://orcid.org/0000-0002-7308-540X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Prathaban, Karthik","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139316881","display_name":"David F. Hanff","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hanff, David F.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139324033","display_name":"Dirk J. Gr\u00fcnhagen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gr\u00fcnhagen, Dirk J.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5129848161","display_name":"Cornelis Verhoef","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Verhoef, Cornelis","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5118775045","display_name":"Joris M van Sabben","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"van Sabben, Joris M.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018590650","display_name":"Evelyne Roets","orcid":"https://orcid.org/0000-0001-9733-7619"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Roets, Evelyne","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106902498","display_name":"Jette J. Slettenhaar","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Slettenhaar, Jette J.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139352306","display_name":"Hans Gelderblom","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gelderblom, Hans","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046503436","display_name":"Ingrid M.E. Desar","orcid":"https://orcid.org/0000-0003-0945-8299"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Desar, Ingrid M. E.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139373447","display_name":"Anna K. L. Reyners","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Reyners, Anna K. L.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139353512","display_name":"Neeltje Steeghs","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Steeghs, Neeltje","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139324618","display_name":"Stefan Klein","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Klein, Stefan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5087184723","display_name":"Martijn P. A. Starmans","orcid":"https://orcid.org/0000-0001-5086-7153"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Starmans, Martijn P. A.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11485","display_name":"Gastrointestinal Tumor Research and Treatment","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/2715","display_name":"Gastroenterology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11485","display_name":"Gastrointestinal Tumor Research and Treatment","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/2715","display_name":"Gastroenterology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11378","display_name":"Gastrointestinal Bleeding Diagnosis and Treatment","score":0.0005000000237487257,"subfield":{"id":"https://openalex.org/subfields/2715","display_name":"Gastroenterology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10231","display_name":"Pancreatic and Hepatic Oncology Research","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gist","display_name":"GiST","score":0.7418000102043152},{"id":"https://openalex.org/keywords/imatinib","display_name":"Imatinib","score":0.7215999960899353},{"id":"https://openalex.org/keywords/generalizability-theory","display_name":"Generalizability theory","score":0.6241999864578247},{"id":"https://openalex.org/keywords/multimodal-therapy","display_name":"Multimodal therapy","score":0.5674999952316284},{"id":"https://openalex.org/keywords/retrospective-cohort-study","display_name":"Retrospective cohort study","score":0.5343999862670898},{"id":"https://openalex.org/keywords/neoadjuvant-therapy","display_name":"Neoadjuvant therapy","score":0.4271000027656555},{"id":"https://openalex.org/keywords/modality","display_name":"Modality (human\u2013computer interaction)","score":0.4244999885559082},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.38929998874664307}],"concepts":[{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.7684999704360962},{"id":"https://openalex.org/C2775922572","wikidata":"https://www.wikidata.org/wiki/Q83567","display_name":"GiST","level":3,"score":0.7418000102043152},{"id":"https://openalex.org/C2777583451","wikidata":"https://www.wikidata.org/wiki/Q177094","display_name":"Imatinib","level":3,"score":0.7215999960899353},{"id":"https://openalex.org/C27158222","wikidata":"https://www.wikidata.org/wiki/Q5532422","display_name":"Generalizability theory","level":2,"score":0.6241999864578247},{"id":"https://openalex.org/C4441509","wikidata":"https://www.wikidata.org/wiki/Q6418787","display_name":"Multimodal therapy","level":2,"score":0.5674999952316284},{"id":"https://openalex.org/C167135981","wikidata":"https://www.wikidata.org/wiki/Q2146302","display_name":"Retrospective cohort study","level":2,"score":0.5343999862670898},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.4578000009059906},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.44179999828338623},{"id":"https://openalex.org/C2778292576","wikidata":"https://www.wikidata.org/wiki/Q6991934","display_name":"Neoadjuvant therapy","level":4,"score":0.4271000027656555},{"id":"https://openalex.org/C2780226545","wikidata":"https://www.wikidata.org/wiki/Q6888030","display_name":"Modality (human\u2013computer interaction)","level":2,"score":0.4244999885559082},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.41019999980926514},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.38929998874664307},{"id":"https://openalex.org/C3019892230","wikidata":"https://www.wikidata.org/wiki/Q177094","display_name":"Imatinib mesylate","level":4,"score":0.3822000026702881},{"id":"https://openalex.org/C16930146","wikidata":"https://www.wikidata.org/wiki/Q4381253","display_name":"Stromal cell","level":2,"score":0.3637000024318695},{"id":"https://openalex.org/C2779984678","wikidata":"https://www.wikidata.org/wiki/Q2145898","display_name":"Response Evaluation Criteria in Solid Tumors","level":4,"score":0.31369999051094055},{"id":"https://openalex.org/C2777377203","wikidata":"https://www.wikidata.org/wiki/Q1809554","display_name":"Radiofrequency ablation","level":3,"score":0.311599999666214},{"id":"https://openalex.org/C2777007597","wikidata":"https://www.wikidata.org/wiki/Q16869243","display_name":"Stromal tumor","level":3,"score":0.296099990606308},{"id":"https://openalex.org/C2779399171","wikidata":"https://www.wikidata.org/wiki/Q1483951","display_name":"Malignancy","level":2,"score":0.27730000019073486},{"id":"https://openalex.org/C535046627","wikidata":"https://www.wikidata.org/wiki/Q30612","display_name":"Clinical trial","level":2,"score":0.27549999952316284},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.2711000144481659},{"id":"https://openalex.org/C66640590","wikidata":"https://www.wikidata.org/wiki/Q4296711","display_name":"Mitotic index","level":3,"score":0.25870001316070557}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.48550/arxiv.2606.25579","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2606.25579","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"doi:10.48550/arxiv.2606.25579","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2606.25579","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Background:":[0],"Response":[1],"to":[2,43,78,81,121,165],"neoadjuvant":[3,82],"imatinib":[4,219],"in":[5,58,192,222],"gastrointestinal":[6],"stromal":[7],"tumors":[8,134],"(GISTs)":[9],"is":[10],"highly":[11],"variable":[12],"and":[13,27,40,62,72,95,111,116,147,197,207],"cannot":[14],"be":[15],"reliably":[16],"predicted":[17],"using":[18,103],"current":[19],"clinical":[20,41,70],"or":[21],"molecular":[22],"markers.":[23],"This":[24],"study":[25],"developed":[26,77],"evaluated":[28],"an":[29],"explainable":[30],"multimodal":[31,229],"deep":[32],"learning":[33],"framework":[34,68,214],"integrating":[35,69],"computed":[36],"tomography":[37],"(CT)":[38],"imaging":[39,75],"variables":[42,71],"predict":[44,79],"treatment":[45,232],"response.":[46,233],"Methods:":[47],"Patients":[48],"from":[49,98],"four":[50],"tertiary":[51],"centers":[52],"were":[53,87,101,119],"retrospectively":[54],"included":[55],"between":[56,195],"2000-2023":[57],"independent":[59],"pretraining":[60,91],"(n=935)":[61],"prediction":[63,221],"(n=213)":[64],"cohorts.":[65],"A":[66],"cross-attention":[67,213],"tumor-centered":[73],"CT":[74],"was":[76,106,175],"response":[80,220],"imatinib.":[83],"Two":[84],"training":[85,97],"strategies":[86],"evaluated:":[88],"(1)":[89],"self-supervised":[90],"with":[92],"low-rank":[93],"adaptation":[94],"(2)":[96],"scratch.":[99],"Hyperparameters":[100],"optimized":[102],"SMAC3.":[104],"Performance":[105],"assessed":[107],"through":[108],"internal":[109,161],"cross-validation":[110],"external":[112,169],"testing.":[113],"Ablation":[114],"analyses":[115,188],"attention-based":[117],"explanations":[118],"used":[120],"quantify":[122],"modality":[123],"contributions.":[124],"Results:":[125],"Among":[126],"213":[127],"patients":[128],"(54.5%":[129],"responders),":[130],"responders":[131,196],"had":[132],"larger":[133],"(112":[135],"vs.":[136,144,153],"89":[137],"mm,":[138],"P=0.026),":[139],"higher":[140],"mitotic":[141],"index":[142],"(3":[143],"0,":[145],"P&lt;0.001),":[146],"more":[148],"frequent":[149],"KIT":[150],"mutations":[151],"(69.0%":[152],"56.7%,":[154],"P=0.019).":[155],"Cross-attention":[156],"models":[157,181],"achieved":[158],"the":[159],"highest":[160],"performance":[162,170,174],"(AUC":[163,171,177,185],"up":[164],"0.99)":[166],"but":[167],"lower":[168],"0.60-0.63).":[172],"Clinical-only":[173],"moderate":[176],"0.66),":[178],"whereas":[179],"imaging-only":[180],"showed":[182],"limited":[183],"generalizability":[184],"0.56-0.66).":[186],"Explainability":[187],"identified":[189],"significant":[190],"differences":[191],"feature":[193],"importance":[194],"non-responders,":[198],"including":[199],"CD117,":[200],"BRAF,":[201],"PDGFRA,":[202],"age,":[203],"sex,":[204],"disease":[205],"status,":[206],"comorbidities":[208],"(FDR-adjusted":[209],"P&lt;=0.036).":[210],"Conclusion:":[211],"The":[212],"shows":[215],"potential":[216],"for":[217],"improving":[218],"GIST":[223],"while":[224],"providing":[225],"interpretable":[226],"insights":[227],"into":[228],"determinants":[230],"of":[231]},"counts_by_year":[],"updated_date":"2026-07-01T06:00:48.157686","created_date":"2026-06-26T00:00:00"}
