{"id":"https://openalex.org/W7163991313","doi":"https://doi.org/10.48550/arxiv.2606.09774","title":"Auto-Configuring Scientific Simulators with Lightweight Coding-Agent Adapters","display_name":"Auto-Configuring Scientific Simulators with Lightweight Coding-Agent Adapters","publication_year":2026,"publication_date":"2026-06-08","ids":{"openalex":"https://openalex.org/W7163991313","doi":"https://doi.org/10.48550/arxiv.2606.09774"},"language":null,"primary_location":{"id":"doi:10.48550/arxiv.2606.09774","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2606.09774","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"},"type":"preprint","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.48550/arxiv.2606.09774","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025166977","display_name":"Matthew Ho","orcid":"https://orcid.org/0000-0003-3207-8868"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ho, Matthew","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5138248557","display_name":"Brian Liu","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Liu, Brian","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036517047","display_name":"Jixuan Chen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chen, Jixuan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5123931015","display_name":"Audrey Wang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wang, Audrey","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5090149660","display_name":"Lianhui Qin","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Qin, Lianhui","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.4823000133037567,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.4823000133037567,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11450","display_name":"Model-Driven Software Engineering Techniques","score":0.06260000169277191,"subfield":{"id":"https://openalex.org/subfields/1712","display_name":"Software"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.041600000113248825,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/executable","display_name":"Executable","score":0.8417999744415283},{"id":"https://openalex.org/keywords/correctness","display_name":"Correctness","score":0.6879000067710876},{"id":"https://openalex.org/keywords/adapter","display_name":"Adapter (computing)","score":0.6146000027656555},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.4984999895095825},{"id":"https://openalex.org/keywords/intuition","display_name":"Intuition","score":0.43560001254081726},{"id":"https://openalex.org/keywords/rewriting","display_name":"Rewriting","score":0.4050999879837036},{"id":"https://openalex.org/keywords/heuristics","display_name":"Heuristics","score":0.3935999870300293},{"id":"https://openalex.org/keywords/safer","display_name":"SAFER","score":0.3928999900817871}],"concepts":[{"id":"https://openalex.org/C160145156","wikidata":"https://www.wikidata.org/wiki/Q778586","display_name":"Executable","level":2,"score":0.8417999744415283},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7089999914169312},{"id":"https://openalex.org/C55439883","wikidata":"https://www.wikidata.org/wiki/Q360812","display_name":"Correctness","level":2,"score":0.6879000067710876},{"id":"https://openalex.org/C177284502","wikidata":"https://www.wikidata.org/wiki/Q1005390","display_name":"Adapter (computing)","level":2,"score":0.6146000027656555},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.4984999895095825},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.44859999418258667},{"id":"https://openalex.org/C132010649","wikidata":"https://www.wikidata.org/wiki/Q189222","display_name":"Intuition","level":2,"score":0.43560001254081726},{"id":"https://openalex.org/C154690210","wikidata":"https://www.wikidata.org/wiki/Q1668499","display_name":"Rewriting","level":2,"score":0.4050999879837036},{"id":"https://openalex.org/C127705205","wikidata":"https://www.wikidata.org/wiki/Q5748245","display_name":"Heuristics","level":2,"score":0.3935999870300293},{"id":"https://openalex.org/C2776654903","wikidata":"https://www.wikidata.org/wiki/Q2601463","display_name":"SAFER","level":2,"score":0.3928999900817871},{"id":"https://openalex.org/C168993435","wikidata":"https://www.wikidata.org/wiki/Q6501125","display_name":"Ground","level":2,"score":0.35190001130104065},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.35089999437332153},{"id":"https://openalex.org/C2778966251","wikidata":"https://www.wikidata.org/wiki/Q208123","display_name":"Deck","level":2,"score":0.3334999978542328},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.31850001215934753},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.31200000643730164},{"id":"https://openalex.org/C2780069185","wikidata":"https://www.wikidata.org/wiki/Q7977945","display_name":"Equivalence (formal languages)","level":2,"score":0.3050000071525574},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.296099990606308},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2727000117301941},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.27129998803138733},{"id":"https://openalex.org/C17231256","wikidata":"https://www.wikidata.org/wiki/Q5156540","display_name":"Completeness (order theory)","level":2,"score":0.2651999890804291},{"id":"https://openalex.org/C115901376","wikidata":"https://www.wikidata.org/wiki/Q184199","display_name":"Automation","level":2,"score":0.26249998807907104},{"id":"https://openalex.org/C113775141","wikidata":"https://www.wikidata.org/wiki/Q428691","display_name":"Computer engineering","level":1,"score":0.2615000009536743},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2578999996185303},{"id":"https://openalex.org/C44154836","wikidata":"https://www.wikidata.org/wiki/Q45045","display_name":"Simulation","level":1,"score":0.2540999948978424}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.48550/arxiv.2606.09774","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2606.09774","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"doi:10.48550/arxiv.2606.09774","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2606.09774","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Configuring":[0],"an":[1,61],"advanced":[2],"scientific":[3],"simulator,":[4,158],"translating":[5],"a":[6,10,16,43,57,67,106,155,190,202],"modeling":[7],"goal":[8],"into":[9],"valid,":[11],"runnable":[12],"input":[13],"deck,":[14],"is":[15,86,132,162,218,228],"persistent":[17],"bottleneck":[18,51],"that":[19,49,109],"costs":[20],"domain":[21,203],"scientists":[22],"hours":[23],"to":[24,173,211],"days.":[25],"Input":[26],"decks":[27],"are":[28],"executable":[29,89],"interfaces:":[30],"simulator-specific":[31],"vocabulary,":[32],"cross-file":[33],"references,":[34],"schema":[35],"constraints,":[36],"and":[37,80,91,100,119,126,134,175,213,233],"validation":[38],"rules":[39],"must":[40],"align":[41],"before":[42],"simulation":[44],"can":[45,52,143],"run.":[46],"We":[47,103],"show":[48,215],"this":[50,111,130],"be":[53],"substantially":[54],"reduced":[55],"with":[56],"lightweight":[58],"adapter":[59,108,139,146],"around":[60],"off-the-shelf":[62],"coding":[63],"agent,":[64],"rather":[65],"than":[66],"bespoke":[68],"simulator":[69],"agent.":[70,152],"Coding":[71],"agents":[72],"already":[73],"navigate":[74],"files,":[75],"edit":[76],"code,":[77],"run":[78],"commands,":[79],"repair":[81],"outputs;":[82],"what":[83],"they":[84],"lack":[85],"the":[87,93,124,145,150,199,216,229],"simulator's":[88],"contract,":[90],"rebuilding":[92],"agent":[94],"loop":[95,127],"risks":[96],"discarding":[97],"harness-calibrated":[98],"tool-use":[99],"self-correction":[101],"behavior.":[102],"introduce":[104],"SIGA,":[105],"coding-agent":[107],"supplies":[110],"contract":[112,131],"through":[113],"retrieval,":[114],"procedural":[115],"memory,":[116],"agent-callable":[117],"validation,":[118],"validation-gated":[120],"termination":[121],"while":[122,231],"leaving":[123],"model":[125],"frozen.":[128],"Because":[129],"small":[133],"external,":[135],"SIGA":[136,193],"also":[137],"supports":[138],"self-evolution:":[140],"prior":[141],"trajectories":[142],"rewrite":[144],"contents":[147],"without":[148],"modifying":[149],"underlying":[151],"On":[153],"GEOS,":[154],"multiphysics":[156],"subsurface":[157],"SIGA's":[159],"main":[160],"gain":[161],"reliability:":[163],"on":[164],"harder":[165],"held-out":[166],"tasks":[167],"it":[168],"improves":[169],"TreeSim":[170],"from":[171],"0.720":[172],"0.789":[174],"reduces":[176],"across-run":[177],"standard":[178],"deviation":[179],"by":[180,183],"about":[181,196,207],"16x":[182],"preventing":[184],"empty":[185],"or":[186],"invalid":[187],"decks.":[188],"In":[189],"human":[191],"calibration,":[192],"reaches":[194],"in":[195,206],"five":[197],"minutes":[198],"deck":[200],"quality":[201],"expert":[204],"reached":[205],"three":[208],"hours.":[209],"Transfers":[210],"OpenFOAM":[212],"LAMMPS":[214],"recipe":[217],"portable":[219],"but":[220],"interface-dependent:":[221],"completion":[222],"gates":[223],"help":[224,235],"when":[225,236],"structural":[226],"completeness":[227],"bottleneck,":[230],"memory":[232],"retrieval":[234],"value":[237],"correctness":[238],"is.":[239]},"counts_by_year":[],"updated_date":"2026-07-28T07:46:37.118299","created_date":"2026-06-10T00:00:00"}