{"id":"https://openalex.org/W7162786208","doi":"https://doi.org/10.48550/arxiv.2605.29220","title":"Motion-guided sparse correction enables expert-quality point tracking across diverse microscopy regimes","display_name":"Motion-guided sparse correction enables expert-quality point tracking across diverse microscopy regimes","publication_year":2026,"publication_date":"2026-05-28","ids":{"openalex":"https://openalex.org/W7162786208","doi":"https://doi.org/10.48550/arxiv.2605.29220"},"language":null,"primary_location":{"id":"doi:10.48550/arxiv.2605.29220","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2605.29220","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"},"type":"preprint","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.48550/arxiv.2605.29220","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5122943931","display_name":"Leonidas Zimianitis","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zimianitis, Leonidas","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5124757925","display_name":"Pasindu Thenahandi","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Thenahandi, Pasindu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5137357926","display_name":"Kai Buckhalter","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Buckhalter, Kai","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5137395061","display_name":"Dineth Jayakody","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jayakody, Dineth","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5137374114","display_name":"Julian O. Kimura","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kimura, Julian O.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5137371374","display_name":"Xinyue Liang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Liang, Xinyue","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5129908049","display_name":"Karen Cunningham","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Cunningham, Karen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5133844313","display_name":"Azeem Ahmad","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ahmad, Azeem","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5125375979","display_name":"Balpreet S. Ahluwalia","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ahluwalia, Balpreet S.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048398447","display_name":"Sampath Jayarathna","orcid":"https://orcid.org/0000-0002-4879-7309"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jayarathna, Sampath","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5137383135","display_name":"Nikos Chrisochoides","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chrisochoides, Nikos","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5129561864","display_name":"Brandon Weissbourd","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Weissbourd, Brandon","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5083125733","display_name":"Dushan N. Wadduwage","orcid":"https://orcid.org/0000-0002-0689-9454"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wadduwage, Dushan N.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.4009000062942505,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.4009000062942505,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11685","display_name":"Zebrafish Biomedical Research Applications","score":0.16779999434947968,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.10480000078678131,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7016000151634216},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.6154999732971191},{"id":"https://openalex.org/keywords/ripple","display_name":"Ripple","score":0.5845000147819519},{"id":"https://openalex.org/keywords/trajectory","display_name":"Trajectory","score":0.5543000102043152},{"id":"https://openalex.org/keywords/point","display_name":"Point (geometry)","score":0.4837000072002411},{"id":"https://openalex.org/keywords/bittorrent-tracker","display_name":"BitTorrent tracker","score":0.4438999891281128},{"id":"https://openalex.org/keywords/interpolation","display_name":"Interpolation (computer graphics)","score":0.39500001072883606}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7200999855995178},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7016000151634216},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.620199978351593},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.6154999732971191},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6019999980926514},{"id":"https://openalex.org/C2779599953","wikidata":"https://www.wikidata.org/wiki/Q1776117","display_name":"Ripple","level":3,"score":0.5845000147819519},{"id":"https://openalex.org/C13662910","wikidata":"https://www.wikidata.org/wiki/Q193139","display_name":"Trajectory","level":2,"score":0.5543000102043152},{"id":"https://openalex.org/C28719098","wikidata":"https://www.wikidata.org/wiki/Q44946","display_name":"Point (geometry)","level":2,"score":0.4837000072002411},{"id":"https://openalex.org/C57501372","wikidata":"https://www.wikidata.org/wiki/Q2021268","display_name":"BitTorrent tracker","level":3,"score":0.4438999891281128},{"id":"https://openalex.org/C137800194","wikidata":"https://www.wikidata.org/wiki/Q11713455","display_name":"Interpolation (computer graphics)","level":3,"score":0.39500001072883606},{"id":"https://openalex.org/C147080431","wikidata":"https://www.wikidata.org/wiki/Q1074953","display_name":"Microscopy","level":2,"score":0.38429999351501465},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3303999900817871},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.32499998807907104},{"id":"https://openalex.org/C56461940","wikidata":"https://www.wikidata.org/wiki/Q970687","display_name":"Eye tracking","level":2,"score":0.3172999918460846},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.31279999017715454},{"id":"https://openalex.org/C24756922","wikidata":"https://www.wikidata.org/wiki/Q1757694","display_name":"Data quality","level":3,"score":0.2754000127315521},{"id":"https://openalex.org/C154586513","wikidata":"https://www.wikidata.org/wiki/Q4420972","display_name":"Tracking system","level":3,"score":0.2502000033855438}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.48550/arxiv.2605.29220","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2605.29220","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"doi:10.48550/arxiv.2605.29220","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2605.29220","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Tracking":[0],"the":[1,35,71,76,92,109,148,151],"dynamics":[2],"of":[3,111,142,150],"non-canonical":[4],"biological":[5,143],"systems":[6],"in":[7],"microscopy":[8,85,159],"videos":[9,36],"remains":[10],"a":[11,59,62,67,129],"persistent":[12],"challenge.":[13],"Both":[14],"classical":[15],"and":[16,26,70,97,135,147],"learning-based":[17],"trackers":[18],"depend":[19],"on":[20,82,101],"expert-reviewed":[21],"data":[22,153],"to":[23,34,121,155],"be":[24],"evaluated":[25],"adapted,":[27],"yet":[28],"exhaustive":[29,112],"manual":[30,113,117,133],"annotation":[31,55,114,134],"rarely":[32],"scales":[33],"where":[37,75],"these":[38],"tools":[39],"are":[40],"needed":[41,154],"most.":[42],"We":[43,79],"developed":[44],"RIPPLE":[45,65,81,107,126],"(Refinement":[46],"Interpolation":[47],"Platform":[48],"for":[49],"Point":[50],"Location":[51],"Estimation),":[52],"which":[53],"recasts":[54],"as":[56],"sparse":[57],"correction:":[58],"user":[60,72],"clicks":[61,118],"starting":[63],"point,":[64],"proposes":[66],"full":[68],"trajectory,":[69],"intervenes":[73],"only":[74],"trajectory":[77],"drifts.":[78],"tested":[80],"five":[83],"challenging":[84],"datasets":[86],"from":[87,91],"our":[88],"laboratories,":[89],"four":[90],"transparent":[93],"jellyfish":[94],"Clytia":[95],"hemisphaerica":[96],"one":[98],"tracking":[99],"landmarks":[100],"rapidly":[102],"moving":[103],"sperm.":[104],"Across":[105],"these,":[106],"matched":[108],"quality":[110],"while":[115],"reducing":[116],"by":[119],"3":[120],"25":[122],"times":[123],"across":[124],"datasets.":[125],"thereby":[127],"fills":[128],"missing":[130],"layer":[131],"between":[132],"fully":[136],"automated":[137,158],"tracking,":[138],"enabling":[139],"immediate":[140],"quantification":[141],"dynamics,":[144],"method":[145],"benchmarking,":[146],"production":[149],"gold-standard":[152],"adapt":[156],"future":[157],"trackers.":[160]},"counts_by_year":[],"updated_date":"2026-07-01T06:00:48.157686","created_date":"2026-05-30T00:00:00"}
