{"id":"https://openalex.org/W7161683797","doi":"https://doi.org/10.48550/arxiv.2605.16552","title":"From Prompts to Protocols: An AI Agent for Laboratory Automation","display_name":"From Prompts to Protocols: An AI Agent for Laboratory Automation","publication_year":2026,"publication_date":"2026-05-15","ids":{"openalex":"https://openalex.org/W7161683797","doi":"https://doi.org/10.48550/arxiv.2605.16552"},"language":null,"primary_location":{"id":"doi:10.48550/arxiv.2605.16552","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2605.16552","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"},"type":"preprint","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.48550/arxiv.2605.16552","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001694236","display_name":"Angelos Angelopoulos","orcid":"https://orcid.org/0000-0002-6498-5633"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Angelopoulos, Angelos","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5136465297","display_name":"James F. Cahoon","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Cahoon, James F.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5054402635","display_name":"Ron Alterovitz","orcid":"https://orcid.org/0000-0002-4492-1384"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alterovitz, Ron","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.4878000020980835,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.4878000020980835,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.22579999268054962,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10456","display_name":"Multi-Agent Systems and Negotiation","score":0.029100000858306885,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protocol","display_name":"Protocol (science)","score":0.5972999930381775},{"id":"https://openalex.org/keywords/automation","display_name":"Automation","score":0.5716999769210815},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.5604000091552734},{"id":"https://openalex.org/keywords/orchestration","display_name":"Orchestration","score":0.5364999771118164},{"id":"https://openalex.org/keywords/laboratory-automation","display_name":"Laboratory automation","score":0.526199996471405},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5081999897956848},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.3919000029563904},{"id":"https://openalex.org/keywords/interaction-protocol","display_name":"Interaction protocol","score":0.3880000114440918}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.765999972820282},{"id":"https://openalex.org/C2780385302","wikidata":"https://www.wikidata.org/wiki/Q367158","display_name":"Protocol (science)","level":3,"score":0.5972999930381775},{"id":"https://openalex.org/C115901376","wikidata":"https://www.wikidata.org/wiki/Q184199","display_name":"Automation","level":2,"score":0.5716999769210815},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.5604000091552734},{"id":"https://openalex.org/C199168358","wikidata":"https://www.wikidata.org/wiki/Q3367000","display_name":"Orchestration","level":3,"score":0.5364999771118164},{"id":"https://openalex.org/C85135244","wikidata":"https://www.wikidata.org/wiki/Q1799487","display_name":"Laboratory automation","level":3,"score":0.526199996471405},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5081999897956848},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.5056999921798706},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.3919000029563904},{"id":"https://openalex.org/C2775851571","wikidata":"https://www.wikidata.org/wiki/Q6045205","display_name":"Interaction protocol","level":3,"score":0.3880000114440918},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.36660000681877136},{"id":"https://openalex.org/C2777609615","wikidata":"https://www.wikidata.org/wiki/Q2527919","display_name":"Virtual Laboratory","level":2,"score":0.3634999990463257},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.35280001163482666},{"id":"https://openalex.org/C151319957","wikidata":"https://www.wikidata.org/wiki/Q752739","display_name":"Asynchronous communication","level":2,"score":0.33219999074935913},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.32170000672340393},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.31349998712539673},{"id":"https://openalex.org/C41550386","wikidata":"https://www.wikidata.org/wiki/Q529909","display_name":"Multi-agent system","level":2,"score":0.30869999527931213},{"id":"https://openalex.org/C197115733","wikidata":"https://www.wikidata.org/wiki/Q1003136","display_name":"Forcing (mathematics)","level":2,"score":0.2919999957084656},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.28619998693466187},{"id":"https://openalex.org/C2777820725","wikidata":"https://www.wikidata.org/wiki/Q7312158","display_name":"Remote laboratory","level":3,"score":0.2825999855995178},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.2815999984741211},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.2694999873638153},{"id":"https://openalex.org/C35869016","wikidata":"https://www.wikidata.org/wiki/Q846636","display_name":"Software architecture","level":3,"score":0.2687000036239624},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.2623000144958496},{"id":"https://openalex.org/C12269588","wikidata":"https://www.wikidata.org/wiki/Q132364","display_name":"Communications protocol","level":2,"score":0.25450000166893005},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2502000033855438}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.48550/arxiv.2605.16552","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2605.16552","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"doi:10.48550/arxiv.2605.16552","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2605.16552","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.6498016715049744}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Automating":[0],"science":[1],"laboratories":[2],"enables":[3],"faster,":[4],"safer,":[5],"more":[6,9],"accurate,":[7],"and":[8,17,23,28,36,46,70,96,99,108,112,116,141,154,168],"reproducible":[10],"execution":[11],"of":[12,19,171],"protocols,":[13,106],"accelerating":[14],"the":[15,80,85,101,131,157],"discovery":[16],"testing":[18],"new":[20],"materials,":[21],"drugs,":[22],"more.":[24],"However,":[25],"setting":[26],"up":[27],"running":[29,107],"autonomous":[30],"labs":[31,150],"requires":[32],"coordinating":[33],"numerous":[34],"instruments":[35],"robots,":[37],"forcing":[38],"scientists":[39,66],"to":[40,67],"write":[41],"code,":[42],"manage":[43],"configuration":[44],"files,":[45],"navigate":[47],"complex":[48],"software":[49],"infrastructure.":[50],"We":[51],"present":[52],"an":[53,90,169],"AI":[54,86,132,158],"agent":[55,87,159],"architecture":[56],"that":[57],"integrates":[58],"large":[59],"language":[60],"models":[61],"with":[62,93,130],"laboratory":[63],"orchestration,":[64],"enabling":[65,136],"interactively":[68],"create":[69],"monitor":[71],"automated":[72,94,149],"lab":[73],"protocols":[74,111,124],"using":[75],"natural":[76],"language.":[77],"Integrated":[78],"into":[79],"Experiment":[81],"Orchestration":[82],"System":[83],"(EOS),":[84],"operates":[88],"under":[89],"agentic":[91],"loop":[92],"validation":[95],"error":[97],"correction,":[98],"supports":[100],"complete":[102],"experimental":[103],"lifecycle:":[104],"creating":[105],"monitoring":[109],"both":[110],"closed-loop":[113],"optimization":[114],"campaigns,":[115],"analyzing":[117],"results.":[118],"A":[119],"visual":[120],"graph":[121],"editor":[122],"renders":[123],"as":[125],"interactive":[126],"node-based":[127],"diagrams":[128],"synchronized":[129],"agent's":[133],"protocol":[134,143,164],"representation,":[135],"seamless":[137],"alternation":[138],"between":[139],"AI-assisted":[140],"manual":[142],"construction.":[144],"Evaluated":[145],"on":[146],"three":[147],"simulated":[148],"spanning":[151],"chemistry,":[152],"biology,":[153],"materials":[155],"science,":[156],"achieves":[160],"a":[161],"97%":[162],"first-attempt":[163],"generation":[165],"success":[166],"rate":[167],"order":[170],"magnitude":[172],"reduction":[173],"in":[174],"required":[175],"interface":[176],"actions.":[177]},"counts_by_year":[],"updated_date":"2026-07-01T06:00:48.157686","created_date":"2026-05-20T00:00:00"}
