{"id":"https://openalex.org/W7156034975","doi":"https://doi.org/10.48550/arxiv.2604.21937","title":"MolClaw: An Autonomous Agent with Hierarchical Skills for Drug Molecule Evaluation, Screening, and Optimization","display_name":"MolClaw: An Autonomous Agent with Hierarchical Skills for Drug Molecule Evaluation, Screening, and Optimization","publication_year":2026,"publication_date":"2026-04-02","ids":{"openalex":"https://openalex.org/W7156034975","doi":"https://doi.org/10.48550/arxiv.2604.21937"},"language":null,"primary_location":{"id":"doi:10.48550/arxiv.2604.21937","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2604.21937","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"},"type":"preprint","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.48550/arxiv.2604.21937","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5134713946","display_name":"Lisheng Zhang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zhang, Lisheng","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134749289","display_name":"Lilong Wang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wang, Lilong","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059902385","display_name":"Xiangyu Sun","orcid":"https://orcid.org/0000-0002-2404-8936"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sun, Xiangyu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134664224","display_name":"Wei Tang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tang, Wei","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134712849","display_name":"Haoyang Su","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Su, Haoyang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034270383","display_name":"Yuehui Qian","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Qian, Yuehui","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134737982","display_name":"Qikui Yang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yang, Qikui","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134696542","display_name":"Qingsong Li","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Li, Qingsong","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134719263","display_name":"Zhenyu Tang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tang, Zhenyu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134743040","display_name":"Haoran Sun","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sun, Haoran","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072790755","display_name":"Yingnan Han","orcid":"https://orcid.org/0000-0002-6356-4052"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Han, Yingnan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134692806","display_name":"Yankai Jiang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jiang, Yankai","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5121760366","display_name":"Wenjie Lou","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lou, Wenjie","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134681877","display_name":"Bowen Zhou","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zhou, Bowen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134744361","display_name":"Xiaosong Wang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wang, Xiaosong","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5134703151","display_name":"Lei Bai","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bai, Lei","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5134700014","display_name":"Zhengwei Xie","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xie, Zhengwei","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.7599999904632568,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.7599999904632568,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.12690000236034393,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.08789999783039093,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7864999771118164},{"id":"https://openalex.org/keywords/bottleneck","display_name":"Bottleneck","score":0.6711000204086304},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.4440999925136566},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4300000071525574},{"id":"https://openalex.org/keywords/competence","display_name":"Competence (human resources)","score":0.3716999888420105},{"id":"https://openalex.org/keywords/orchestration","display_name":"Orchestration","score":0.37139999866485596}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7864999771118164},{"id":"https://openalex.org/C2780513914","wikidata":"https://www.wikidata.org/wiki/Q18210350","display_name":"Bottleneck","level":2,"score":0.6711000204086304},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6585999727249146},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.47519999742507935},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.4440999925136566},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4300000071525574},{"id":"https://openalex.org/C100521375","wikidata":"https://www.wikidata.org/wiki/Q2015382","display_name":"Competence (human resources)","level":2,"score":0.3716999888420105},{"id":"https://openalex.org/C199168358","wikidata":"https://www.wikidata.org/wiki/Q3367000","display_name":"Orchestration","level":3,"score":0.37139999866485596},{"id":"https://openalex.org/C13687954","wikidata":"https://www.wikidata.org/wiki/Q4826847","display_name":"Autonomous agent","level":2,"score":0.35040000081062317},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34880000352859497},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3199999928474426},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.31709998846054077},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.3001999855041504},{"id":"https://openalex.org/C41550386","wikidata":"https://www.wikidata.org/wiki/Q529909","display_name":"Multi-agent system","level":2,"score":0.29649999737739563},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.27309998869895935},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.25940001010894775},{"id":"https://openalex.org/C124681953","wikidata":"https://www.wikidata.org/wiki/Q339062","display_name":"Decomposition","level":2,"score":0.2581999897956848},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.2542000114917755}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.48550/arxiv.2604.21937","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2604.21937","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"doi:10.48550/arxiv.2604.21937","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2604.21937","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Preprint"},"sustainable_development_goals":[{"score":0.4334273636341095,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Computational":[0],"drug":[1,8,47,172],"discovery,":[2],"particularly":[3],"the":[4,109,166],"complex":[5],"workflows":[6,151],"of":[7,16],"molecule":[9,48],"screening":[10],"and":[11,31,51,92,94,103,121,139],"optimization,":[12,120],"requires":[13],"orchestrating":[14],"dozens":[15],"specialized":[17,57],"tools":[18],"in":[19,34,68,108],"multi-step":[20],"workflows,":[21],"yet":[22],"current":[23],"AI":[24],"agents":[25],"struggle":[26],"to":[27,127],"maintain":[28],"robust":[29],"performance":[30,135],"consistently":[32],"underperform":[33],"these":[35],"high-complexity":[36],"scenarios.":[37],"Here":[38],"we":[39,112],"present":[40],"MolClaw,":[41],"an":[42],"autonomous":[43],"agent":[44,72],"that":[45,70,143,148],"leads":[46],"evaluation,":[49],"screening,":[50,119],"optimization.":[52],"It":[53],"unifies":[54],"over":[55],"30":[56],"domain":[58],"resources":[59],"through":[60],"a":[61,95,115],"three-tier":[62],"hierarchical":[63],"skill":[64,97],"architecture":[65],"(70":[66],"skills":[67,78,83],"total)":[69],"facilitates":[71],"long-term":[73],"interaction":[74],"at":[75],"runtime:":[76],"tool-level":[77],"standardize":[79],"atomic":[80],"operations,":[81],"workflow-level":[82],"compose":[84],"them":[85],"into":[86],"validated":[87],"pipelines":[88],"with":[89,157],"quality":[90],"check":[91],"reflection,":[93],"discipline-level":[96],"supplies":[98],"scientific":[99],"principles":[100],"governing":[101],"planning":[102],"verification":[104],"across":[105,136],"all":[106,137],"scenarios":[107],"field.":[110],"Additionally,":[111],"introduce":[113],"MolBench,":[114],"benchmark":[116],"comprising":[117],"molecular":[118],"end-to-end":[122],"discovery":[123],"challenges":[124],"spanning":[125],"8":[126],"50+":[128],"sequential":[129],"tool":[130],"calls.":[131],"MolClaw":[132],"achieves":[133],"state-of-the-art":[134],"metrics,":[138],"ablation":[140],"studies":[141],"confirm":[142],"gains":[144],"concentrate":[145],"on":[146,154],"tasks":[147],"demand":[149],"structured":[150],"while":[152],"vanishing":[153],"those":[155],"solvable":[156],"ad":[158],"hoc":[159],"scripting,":[160],"establishing":[161],"workflow":[162],"orchestration":[163],"competence":[164],"as":[165],"primary":[167],"capability":[168],"bottleneck":[169],"for":[170],"AI-driven":[171],"discovery.":[173]},"counts_by_year":[],"updated_date":"2026-07-01T06:00:48.157686","created_date":"2026-04-28T00:00:00"}
