{"id":"https://openalex.org/W7127601249","doi":"https://doi.org/10.48550/arxiv.2602.03562","title":"NPCNet: Navigator-Driven Pseudo Text for Deep Clustering of Early Sepsis Phenotyping","display_name":"NPCNet: Navigator-Driven Pseudo Text for Deep Clustering of Early Sepsis Phenotyping","publication_year":2026,"publication_date":"2026-02-03","ids":{"openalex":"https://openalex.org/W7127601249","doi":"https://doi.org/10.48550/arxiv.2602.03562"},"language":null,"primary_location":{"id":"pmh:doi:10.48550/arxiv.2602.03562","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"publisher-specific-oa","license_id":"https://openalex.org/licenses/publisher-specific-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},"type":"article","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":null,"any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5125090134","display_name":"Pi-Ju Tsai","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tsai, Pi-Ju","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5124992953","display_name":"Charkkri Limbud","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Limbud, Charkkri","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112881205","display_name":"Kuan-Fu Chen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chen, Kuan-Fu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5125027532","display_name":"Yi-Ju Tseng","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tseng, Yi-Ju","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.12162733,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10218","display_name":"Sepsis Diagnosis and Treatment","score":0.7263000011444092,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10218","display_name":"Sepsis Diagnosis and Treatment","score":0.7263000011444092,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.19030000269412994,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.008700000122189522,"subfield":{"id":"https://openalex.org/subfields/1308","display_name":"Clinical Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.70660001039505},{"id":"https://openalex.org/keywords/sepsis","display_name":"Sepsis","score":0.7006999850273132},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.5422999858856201},{"id":"https://openalex.org/keywords/limiting","display_name":"Limiting","score":0.4458000063896179},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.3034000098705292}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.70660001039505},{"id":"https://openalex.org/C2778384902","wikidata":"https://www.wikidata.org/wiki/Q183134","display_name":"Sepsis","level":2,"score":0.7006999850273132},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.5422999858856201},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.5138999819755554},{"id":"https://openalex.org/C188198153","wikidata":"https://www.wikidata.org/wiki/Q1613840","display_name":"Limiting","level":2,"score":0.4458000063896179},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.43230000138282776},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.42669999599456787},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4262000024318695},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.38999998569488525},{"id":"https://openalex.org/C177713679","wikidata":"https://www.wikidata.org/wiki/Q679690","display_name":"Intensive care medicine","level":1,"score":0.3506999909877777},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33809998631477356},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.3034000098705292},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.29739999771118164},{"id":"https://openalex.org/C3019952477","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Health records","level":3,"score":0.29679998755455017},{"id":"https://openalex.org/C3020144179","wikidata":"https://www.wikidata.org/wiki/Q10871684","display_name":"Electronic health record","level":3,"score":0.2743000090122223},{"id":"https://openalex.org/C3020646490","wikidata":"https://www.wikidata.org/wiki/Q25203551","display_name":"Clinical phenotype","level":4,"score":0.25690001249313354}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:doi:10.48550/arxiv.2602.03562","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"publisher-specific-oa","license_id":"https://openalex.org/licenses/publisher-specific-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"doi:10.48550/arxiv.2602.03562","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2602.03562","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"pmh:doi:10.48550/arxiv.2602.03562","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"publisher-specific-oa","license_id":"https://openalex.org/licenses/publisher-specific-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.5447614789009094}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Electronic":[0],"Health":[1],"Records":[2],"(EHRs)":[3],"provide":[4],"high-dimensional":[5],"temporal":[6,25],"data":[7,19],"essential":[8],"for":[9,51,182],"patient":[10,153],"modeling;":[11],"however,":[12],"conventional":[13],"algorithmic":[14],"approaches":[15],"often":[16,63],"rely":[17],"on":[18,160,169],"aggregation":[20],"or":[21],"imputation,":[22],"which":[23],"distorts":[24],"disease":[26],"trajectories.":[27],"Such":[28],"computational":[29],"limitations":[30],"are":[31],"particularly":[32],"critical":[33],"in":[34,46,65,186],"sepsis,":[35],"a":[36,43,74,81,85,89,179],"heterogeneous":[37],"syndrome":[38],"where":[39],"clustering-based":[40],"stratification":[41],"plays":[42],"key":[44],"role":[45],"identifying":[47],"clinically":[48],"distinct":[49],"phenotypes":[50,66,134],"precise":[52],"treatment":[53,184],"strategies.":[54],"Furthermore,":[55],"existing":[56],"clustering":[57,76,86,128,140,172],"processes":[58],"seldom":[59],"incorporate":[60],"domain-driven":[61,156],"constraints,":[62],"resulting":[64],"that":[67,79,164],"lack":[68],"clear":[69],"clinical":[70,102,119,136,175],"distinction.":[71],"We":[72,92],"propose":[73],"novel":[75],"network,":[77],"NPCNet,":[78],"comprises":[80],"text":[82],"embedding":[83],"generator,":[84],"operator,":[87],"and":[88,152,174],"target":[90,115],"navigator.":[91],"first":[93],"transform":[94],"EHRs":[95],"into":[96,121],"pseudo":[97],"texts":[98],"by":[99],"discretizing":[100],"continuous":[101],"measurements,":[103],"then":[104,117],"integrate":[105],"them":[106],"with":[107,135],"static":[108],"variables":[109],"to":[110,130,147],"construct":[111],"the":[112,122,139,187],"embeddings.":[113],"The":[114],"navigator":[116],"infuses":[118],"knowledge":[120],"embeddings":[123],"through":[124],"auxiliary":[125],"tasks,":[126],"constraining":[127],"results":[129],"better":[131],"align":[132],"sepsis":[133],"significance.":[137],"Finally,":[138],"operator":[141],"employs":[142],"an":[143],"iterative":[144],"refinement":[145],"mechanism":[146],"jointly":[148],"optimize":[149],"phenotype":[150],"centroids":[151],"representations":[154],"under":[155],"constraints.":[157],"Extensive":[158],"experiments":[159],"public":[161],"datasets":[162],"validate":[163],"NPCNet":[165],"achieves":[166],"superior":[167],"performance":[168],"both":[170],"internal":[171],"benchmarks":[173],"validity":[176],"metrics,":[177],"offering":[178],"viable":[180],"pathway":[181],"precision":[183],"strategies":[185],"management":[188],"of":[189],"sepsis.":[190]},"counts_by_year":[],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2026-02-06T00:00:00"}
