{"id":"https://openalex.org/W4405470177","doi":"https://doi.org/10.48550/arxiv.2412.11477","title":"NoteContrast: Contrastive Language-Diagnostic Pretraining for Medical Text","display_name":"NoteContrast: Contrastive Language-Diagnostic Pretraining for Medical Text","publication_year":2024,"publication_date":"2024-12-16","ids":{"openalex":"https://openalex.org/W4405470177","doi":"https://doi.org/10.48550/arxiv.2412.11477"},"language":"en","primary_location":{"id":"pmh:oai:arXiv.org:2412.11477","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2412.11477","pdf_url":"https://arxiv.org/pdf/2412.11477","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"type":"preprint","indexed_in":["arxiv","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2412.11477","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5115505694","display_name":"Prajwal Kailas","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Kailas, Prajwal","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056917994","display_name":"Max Homilius","orcid":"https://orcid.org/0000-0001-7240-0028"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Homilius, Max","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026141445","display_name":"Rahul C. Deo","orcid":"https://orcid.org/0000-0002-2791-9434"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Deo, Rahul C.","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5052863636","display_name":"Calum A. MacRae","orcid":"https://orcid.org/0000-0001-5181-2664"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"MacRae, Calum A.","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5115505694"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9606999754905701,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9606999754905701,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9437000155448914,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13629","display_name":"Text Readability and Simplification","score":0.9205999970436096,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.5670555830001831},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.506445050239563},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4759901762008667},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.3880603313446045},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.08283030986785889}],"concepts":[{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.5670555830001831},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.506445050239563},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4759901762008667},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.3880603313446045},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.08283030986785889}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:arXiv.org:2412.11477","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2412.11477","pdf_url":"https://arxiv.org/pdf/2412.11477","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"doi:10.48550/arxiv.2412.11477","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2412.11477","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2412.11477","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2412.11477","pdf_url":"https://arxiv.org/pdf/2412.11477","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306230","display_name":"American Heart Association","ror":"https://ror.org/013kjyp64"},{"id":"https://openalex.org/F4320307765","display_name":"Pfizer","ror":"https://ror.org/01xdqrp08"},{"id":"https://openalex.org/F4320307770","display_name":"AstraZeneca","ror":"https://ror.org/04r9x1a08"},{"id":"https://openalex.org/F4320315955","display_name":"Quest Diagnostics","ror":"https://ror.org/010g9bb70"},{"id":"https://openalex.org/F4320317866","display_name":"Verily Life Sciences","ror":null},{"id":"https://openalex.org/F4320319810","display_name":"Insmed","ror":null},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4405470177.pdf","grobid_xml":"https://content.openalex.org/works/W4405470177.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Accurate":[0],"diagnostic":[1,29,57,123,151,177],"coding":[2,21,58,178],"of":[3,50,59,110,148],"medical":[4,12,42,60,83,111,137,155],"notes":[5,43,61],"is":[6,22],"crucial":[7],"for":[8,26,65,121,136,163,171],"enhancing":[9],"patient":[10],"care,":[11],"research,":[13],"and":[14,28,35,98,139,153,175],"error-free":[15],"billing":[16],"in":[17,41,72],"healthcare":[18,68],"organizations.":[19],"Manual":[20],"a":[23,46,51,66,127,160],"time-consuming":[24],"task":[25],"providers,":[27],"codes":[30,152],"often":[31],"exhibit":[32],"low":[33],"sensitivity":[34],"specificity,":[36],"whereas":[37],"the":[38,107,172],"free":[39],"text":[40],"can":[44],"be":[45],"more":[47],"precise":[48],"description":[49],"patients":[52],"status.":[53],"Thus,":[54],"accurate":[55],"automated":[56,108],"has":[62],"become":[63],"critical":[64],"learning":[67],"system.":[69],"Recent":[70],"developments":[71],"long-document":[73],"transformer":[74],"architectures":[75],"have":[76,90],"enabled":[77],"attention-based":[78],"deep-learning":[79],"models":[80,100,120,135,170],"to":[81,93,143],"adjudicate":[82],"notes.":[84],"In":[85],"addition,":[86],"contrastive":[87,141,161],"loss":[88],"functions":[89],"been":[91],"used":[92],"jointly":[94],"pre-train":[95],"large":[96,128,133],"language":[97,134],"image":[99],"with":[101],"noisy":[102],"labels.":[103],"To":[104],"further":[105],"improve":[106],"adjudication":[109],"notes,":[112,138],"we":[113],"developed":[114],"an":[115,145],"approach":[116,162],"based":[117],"on":[118],"i)":[119],"ICD-10":[122,150],"code":[124],"sequences":[125],"using":[126],"real-world":[129],"data":[130],"set,":[131],"ii)":[132],"iii)":[140],"pre-training":[142,164],"build":[144],"integrated":[146],"model":[147],"both":[149],"corresponding":[154],"text.":[156],"We":[157],"demonstrate":[158],"that":[159],"improves":[165],"performance":[166],"over":[167],"prior":[168],"state-of-the-art":[169],"MIMIC-III-50,":[173],"MIMIC-III-rare50,":[174],"MIMIC-III-full":[176],"tasks.":[179]},"counts_by_year":[],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
