{"id":"https://openalex.org/W4404988602","doi":"https://doi.org/10.48550/arxiv.2411.17337","title":"sbi reloaded: a toolkit for simulation-based inference workflows","display_name":"sbi reloaded: a toolkit for simulation-based inference workflows","publication_year":2024,"publication_date":"2024-11-26","ids":{"openalex":"https://openalex.org/W4404988602","doi":"https://doi.org/10.48550/arxiv.2411.17337"},"language":"en","primary_location":{"id":"pmh:oai:arXiv.org:2411.17337","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2411.17337","pdf_url":"https://arxiv.org/pdf/2411.17337","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"type":"preprint","indexed_in":["arxiv","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2411.17337","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055129584","display_name":"Jan Boelts","orcid":"https://orcid.org/0000-0003-4979-7092"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Boelts, Jan","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089500555","display_name":"Michael Deistler","orcid":"https://orcid.org/0000-0002-3573-0404"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Deistler, Michael","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5094208320","display_name":"Manuel Gloeckler","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gloeckler, Manuel","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057540719","display_name":"\u00c1lvaro Tejero-Cantero","orcid":"https://orcid.org/0000-0002-8768-4227"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tejero-Cantero, \u00c1lvaro","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043787286","display_name":"Jan-Matthis Lueckmann","orcid":"https://orcid.org/0000-0003-4320-4663"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lueckmann, Jan-Matthis","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040966381","display_name":"Guy Moss","orcid":"https://orcid.org/0000-0002-5504-0523"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Moss, Guy","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074013928","display_name":"Peter Steinbach","orcid":"https://orcid.org/0000-0002-4974-230X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Steinbach, Peter","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075323166","display_name":"Thomas Moreau","orcid":"https://orcid.org/0000-0002-1523-3419"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Moreau, Thomas","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056073467","display_name":"Fabio Muratore","orcid":"https://orcid.org/0000-0001-8600-2610"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Muratore, Fabio","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074154797","display_name":"Julia Linhart","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Linhart, Julia","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078047269","display_name":"Conor Durkan","orcid":"https://orcid.org/0000-0001-9333-7777"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Durkan, Conor","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031248654","display_name":"Julius Vetter","orcid":"https://orcid.org/0009-0003-9839-9039"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vetter, Julius","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013006767","display_name":"B. Miller","orcid":"https://orcid.org/0000-0003-0387-8727"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Miller, Benjamin Kurt","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011157839","display_name":"Miriam Herold","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Herold, Maternus","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012136858","display_name":"Abolfazl Ziaeemehr","orcid":"https://orcid.org/0000-0002-4696-9947"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ziaeemehr, Abolfazl","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045568925","display_name":"Matthijs Pals","orcid":"https://orcid.org/0000-0002-3051-1325"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pals, Matthijs","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056750659","display_name":"Theo Gruner","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gruner, Theo","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103252659","display_name":"Sebastian Bischoff","orcid":"https://orcid.org/0000-0002-3066-4022"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bischoff, Sebastian","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114988134","display_name":"Nastya Krouglova","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Krouglova, Nastya","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110941860","display_name":"Richard Gao","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gao, Richard","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076310458","display_name":"Janne K. Lappalainen","orcid":"https://orcid.org/0000-0002-0547-7401"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lappalainen, Janne K.","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045234906","display_name":"B\u00e1lint Mucs\u00e1nyi","orcid":"https://orcid.org/0000-0002-7075-9018"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mucs\u00e1nyi, B\u00e1lint","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081822814","display_name":"Felix Pei","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pei, Felix","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043346741","display_name":"Auguste Schulz","orcid":"https://orcid.org/0000-0001-8616-3756"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Schulz, Auguste","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022197014","display_name":"Zinovia Stefanidi","orcid":"https://orcid.org/0000-0001-7317-0009"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Stefanidi, Zinovia","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027334117","display_name":"Pedro Luiz Coelho Rodrigues","orcid":"https://orcid.org/0000-0003-3534-317X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rodrigues, Pedro","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010417177","display_name":"Cornelius Schr\u00f6der","orcid":"https://orcid.org/0000-0001-5643-2097"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Schr\u00f6der, Cornelius","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114988135","display_name":"Faried Abu Zaid","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zaid, Faried Abu","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002391564","display_name":"Jonas Beck","orcid":"https://orcid.org/0000-0002-2561-5074"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Beck, Jonas","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027064428","display_name":"Jaivardhan Kapoor","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kapoor, Jaivardhan","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107836185","display_name":"David Greenberg","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Greenberg, David S.","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047668885","display_name":"Pedro J. Gon\u00e7alves","orcid":"https://orcid.org/0000-0002-6987-4836"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gon\u00e7alves, Pedro J.","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5080225154","display_name":"Jakob H. Macke","orcid":"https://orcid.org/0000-0001-5154-8912"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Macke, Jakob H.","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":33,"corresponding_author_ids":["https://openalex.org/A5055129584"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.96670001745224,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.96670001745224,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11195","display_name":"Simulation Techniques and Applications","score":0.902899980545044,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7664670944213867},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6424180269241333},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6162664294242859},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.4414197504520416},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.40350696444511414},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.35185176134109497},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24274900555610657},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.13952672481536865}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7664670944213867},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6424180269241333},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6162664294242859},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.4414197504520416},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.40350696444511414},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.35185176134109497},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24274900555610657},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.13952672481536865}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:arXiv.org:2411.17337","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2411.17337","pdf_url":"https://arxiv.org/pdf/2411.17337","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"doi:10.48550/arxiv.2411.17337","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2411.17337","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2411.17337","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2411.17337","pdf_url":"https://arxiv.org/pdf/2411.17337","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4404988602.pdf"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W2397952901","https://openalex.org/W2029380707","https://openalex.org/W188202134","https://openalex.org/W4255934811","https://openalex.org/W2465382974","https://openalex.org/W2010229520"],"abstract_inverted_index":{"Scientists":[0],"and":[1,45,63,89,112,142,173],"engineers":[2,174],"use":[3],"simulators":[4],"to":[5,17,58,156,175,180],"model":[6,62],"empirically":[7,191],"observed":[8,22,43,192],"phenomena.":[9],"However,":[10],"tuning":[11],"the":[12,61,69,81,105,162,168],"parameters":[13,40],"of":[14,68,87,134,161],"a":[15,25,115,131],"simulator":[16],"ensure":[18],"its":[19],"outputs":[20],"match":[21,42],"data":[23,44],"presents":[24],"significant":[26],"challenge.":[27],"Simulation-based":[28],"inference":[29,36,92,135,164],"(SBI)":[30],"addresses":[31],"this":[32],"by":[33],"enabling":[34],"Bayesian":[35,52,120],"for":[37,84,93,187],"simulators,":[38,182],"identifying":[39],"that":[41,118],"align":[46],"with":[47,190],"prior":[48],"knowledge.":[49],"Unlike":[50],"traditional":[51],"inference,":[53],"SBI":[54,74,121,178],"only":[55],"needs":[56],"access":[57],"simulations":[59,98,189],"from":[60],"does":[64],"not":[65,77],"require":[66,78],"evaluations":[67],"likelihood":[70],"function.":[71],"In":[72,145],"addition,":[73,146],"algorithms":[75,122],"do":[76],"gradients":[79],"through":[80],"simulator,":[82],"allow":[83],"massive":[85],"parallelization":[86],"simulations,":[88],"can":[90],"perform":[91],"different":[94],"observations":[95],"without":[96],"further":[97],"or":[99],"training,":[100],"thereby":[101],"amortizing":[102],"inference.":[103],"Over":[104],"past":[106],"years,":[107],"we":[108],"have":[109],"developed,":[110],"maintained,":[111],"extended":[113],"sbi,":[114],"PyTorch-based":[116],"package":[117],"implements":[119,130],"based":[123],"on":[124],"neural":[125,137],"networks.":[126],"The":[127],"sbi":[128,169],"toolkit":[129,170],"wide":[132],"range":[133],"methods,":[136,141],"network":[138],"architectures,":[139],"sampling":[140],"diagnostic":[143],"tools.":[144],"it":[147],"provides":[148],"well-tested":[149],"default":[150],"settings,":[151],"but":[152],"also":[153],"offers":[154],"flexibility":[155],"fully":[157],"customize":[158],"every":[159],"step":[160],"simulation-based":[163],"workflow.":[165],"Taken":[166],"together,":[167],"enables":[171],"scientists":[172],"apply":[176],"state-of-the-art":[177],"methods":[179],"black-box":[181],"opening":[183],"up":[184],"new":[185],"possibilities":[186],"aligning":[188],"data.":[193]},"counts_by_year":[],"updated_date":"2026-02-09T09:26:11.010843","created_date":"2025-10-10T00:00:00"}
