{"id":"https://openalex.org/W4404260753","doi":"https://doi.org/10.48550/arxiv.2410.16296","title":"Large Scale MRI Collection and Segmentation of Cirrhotic Liver","display_name":"Large Scale MRI Collection and Segmentation of Cirrhotic Liver","publication_year":2024,"publication_date":"2024-10-06","ids":{"openalex":"https://openalex.org/W4404260753","doi":"https://doi.org/10.48550/arxiv.2410.16296"},"language":"en","primary_location":{"id":"pmh:oai:arXiv.org:2410.16296","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2410.16296","pdf_url":"https://arxiv.org/pdf/2410.16296","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"type":"preprint","indexed_in":["arxiv","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2410.16296","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044673103","display_name":"Debesh Jha","orcid":"https://orcid.org/0000-0002-8078-6730"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Jha, Debesh","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004353809","display_name":"Onkar Susladkar","orcid":"https://orcid.org/0000-0003-4511-1858"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Susladkar, Onkar Kishor","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057901186","display_name":"Vandan Gorade","orcid":"https://orcid.org/0000-0001-5389-3373"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gorade, Vandan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072616384","display_name":"Elif Kele\u015f","orcid":"https://orcid.org/0000-0001-8103-797X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Keles, Elif","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087543918","display_name":"Matthew Antalek","orcid":"https://orcid.org/0000-0002-9807-1952"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Antalek, Matthew","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114601748","display_name":"Deniz Seyithano\u011flu","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Seyithanoglu, Deniz","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056497773","display_name":"Timurhan Cebeci","orcid":"https://orcid.org/0000-0002-0966-2436"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Cebeci, Timurhan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114601749","display_name":"Halil Ertugrul Aktas","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Aktas, Halil Ertugrul","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114601750","display_name":"Gulbiz Dagoglu Kartal","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kartal, Gulbiz Dagoglu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005523046","display_name":"Sabahattin Kaymako\u011flu","orcid":"https://orcid.org/0000-0003-4910-249X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kaymakoglu, Sabahattin","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046022726","display_name":"\u015e\u00fckr\u00fc Mehmet Ert\u00fcrk","orcid":"https://orcid.org/0000-0003-4086-675X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Erturk, Sukru Mehmet","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066776275","display_name":"Yury Velichko","orcid":"https://orcid.org/0000-0002-2287-5727"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Velichko, Yuri","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008135666","display_name":"Daniela P. Ladner","orcid":"https://orcid.org/0000-0001-5526-8272"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ladner, Daniela","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064936135","display_name":"Amir A. Borhani","orcid":"https://orcid.org/0000-0001-8963-2984"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Borhani, Amir A.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112971868","display_name":"Alpay Medetalibeyo\u011flu","orcid":"https://orcid.org/0000-0002-3024-4036"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Medetalibeyoglu, Alpay","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033826718","display_name":"G\u00f6rkem Durak","orcid":"https://orcid.org/0000-0002-1608-1955"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Durak, Gorkem","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5030188696","display_name":"Ula\u015f Ba\u011fc\u0131","orcid":"https://orcid.org/0000-0001-7379-6829"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bagci, Ulas","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":17,"corresponding_author_ids":["https://openalex.org/A5044673103"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10351","display_name":"Liver Disease Diagnosis and Treatment","score":0.9847000241279602,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10351","display_name":"Liver Disease Diagnosis and Treatment","score":0.9847000241279602,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10073","display_name":"Hepatocellular Carcinoma Treatment and Prognosis","score":0.945900022983551,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.6274548768997192},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5010745525360107},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41296982765197754},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.4012324810028076},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.30097609758377075},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.17916235327720642},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.15804103016853333}],"concepts":[{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.6274548768997192},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5010745525360107},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41296982765197754},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4012324810028076},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.30097609758377075},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.17916235327720642},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.15804103016853333}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:arXiv.org:2410.16296","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2410.16296","pdf_url":"https://arxiv.org/pdf/2410.16296","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"doi:10.48550/arxiv.2410.16296","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2410.16296","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2410.16296","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2410.16296","pdf_url":"https://arxiv.org/pdf/2410.16296","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3649391186","display_name":null,"funder_award_id":"U01-DK127384-02S1","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4442257866","display_name":null,"funder_award_id":"R01-CA246704","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4562991000","display_name":null,"funder_award_id":"U01-CA268808","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4841406011","display_name":null,"funder_award_id":"R01-CA240639","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4404260753.pdf"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W3031052312","https://openalex.org/W4389568370","https://openalex.org/W3032375762","https://openalex.org/W1995515455","https://openalex.org/W2080531066","https://openalex.org/W3108674512","https://openalex.org/W1506200166"],"abstract_inverted_index":{"Liver":[0],"cirrhosis":[1],"represents":[2],"the":[3,61,71,128],"end":[4],"stage":[5],"of":[6,63,132],"chronic":[7],"liver":[8,138],"disease,":[9],"characterized":[10],"by":[11,60],"extensive":[12],"fibrosis":[13],"and":[14,42,83,106,130,148],"nodular":[15],"regeneration":[16],"that":[17],"significantly":[18],"increases":[19],"mortality":[20],"risk.":[21],"While":[22],"magnetic":[23],"resonance":[24],"imaging":[25],"(MRI)":[26],"offers":[27],"a":[28],"non-invasive":[29],"assessment,":[30],"accurately":[31],"segmenting":[32],"cirrhotic":[33,97,137],"livers":[34],"presents":[35],"substantial":[36],"challenges":[37],"due":[38],"to":[39,122],"morphological":[40],"alterations":[41],"heterogeneous":[43],"signal":[44],"characteristics.":[45],"Deep":[46],"learning":[47,120],"approaches":[48],"show":[49],"promise":[50],"for":[51,96,136],"automating":[52],"these":[53],"tasks,":[54],"but":[55],"progress":[56,142],"has":[57],"been":[58],"limited":[59],"absence":[62],"large-scale,":[64],"annotated":[65,90],"datasets.":[66],"Here,":[67],"we":[68,112],"present":[69],"CirrMRI600+,":[70],"first":[72],"comprehensive":[73],"dataset":[74,100],"comprising":[75],"628":[76],"high-resolution":[77],"abdominal":[78],"MRI":[79],"scans":[80],"(310":[81],"T1-weighted":[82],"318":[84],"T2-weighted":[85],"sequences,":[86],"totaling":[87],"nearly":[88],"40,000":[89],"slices)":[91],"with":[92],"expert-validated":[93],"segmentation":[94],"labels":[95],"livers.":[98],"The":[99],"includes":[101],"demographic":[102],"information,":[103],"clinical":[104],"parameters,":[105],"histopathological":[107],"validation":[108,131],"where":[109],"available.":[110],"Additionally,":[111],"provide":[113],"benchmark":[114],"results":[115],"from":[116],"11":[117],"state-of-the-art":[118],"deep":[119],"experiments":[121],"establish":[123],"performance":[124],"standards.":[125],"CirrMRI600+":[126],"enables":[127],"development":[129],"advanced":[133],"computational":[134],"methods":[135],"analysis,":[139],"potentially":[140],"accelerating":[141],"toward":[143],"automated":[144],"Cirrhosis":[145],"visual":[146],"staging":[147],"personalized":[149],"treatment":[150],"planning.":[151]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-05-12T08:28:47.272897","created_date":"2024-11-13T00:00:00"}
