{"id":"https://openalex.org/W4403159969","doi":"https://doi.org/10.48550/arxiv.2409.02284","title":"Biochemical Prostate Cancer Recurrence Prediction: Thinking Fast & Slow","display_name":"Biochemical Prostate Cancer Recurrence Prediction: Thinking Fast & Slow","publication_year":2024,"publication_date":"2024-09-03","ids":{"openalex":"https://openalex.org/W4403159969","doi":"https://doi.org/10.48550/arxiv.2409.02284"},"language":"en","primary_location":{"id":"pmh:oai:arXiv.org:2409.02284","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2409.02284","pdf_url":"https://arxiv.org/pdf/2409.02284","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"type":"preprint","indexed_in":["arxiv","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2409.02284","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109796049","display_name":"Suhang You","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"You, Suhang","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107783975","display_name":"Sanyukta Adap","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Adap, Sanyukta","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049617352","display_name":"Siddhesh Thakur","orcid":"https://orcid.org/0000-0003-4807-2495"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Thakur, Siddhesh","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049906575","display_name":"Bhakti Baheti","orcid":"https://orcid.org/0000-0001-5475-3903"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Baheti, Bhakti","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5043497448","display_name":"Spyridon Bakas","orcid":"https://orcid.org/0000-0001-8734-6482"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bakas, Spyridon","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5109796049"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9908999800682068,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9484000205993652,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/prostate-cancer","display_name":"Prostate cancer","score":0.6868440508842468},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.5884147882461548},{"id":"https://openalex.org/keywords/prostate","display_name":"Prostate","score":0.5549941062927246},{"id":"https://openalex.org/keywords/oncology","display_name":"Oncology","score":0.4230250120162964},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.3917342722415924},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.34278765320777893}],"concepts":[{"id":"https://openalex.org/C2780192828","wikidata":"https://www.wikidata.org/wiki/Q181257","display_name":"Prostate cancer","level":3,"score":0.6868440508842468},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.5884147882461548},{"id":"https://openalex.org/C2776235491","wikidata":"https://www.wikidata.org/wiki/Q9625","display_name":"Prostate","level":3,"score":0.5549941062927246},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.4230250120162964},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.3917342722415924},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.34278765320777893}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:arXiv.org:2409.02284","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2409.02284","pdf_url":"https://arxiv.org/pdf/2409.02284","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"doi:10.48550/arxiv.2409.02284","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2409.02284","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2409.02284","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2409.02284","pdf_url":"https://arxiv.org/pdf/2409.02284","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4403159969.pdf","grobid_xml":"https://content.openalex.org/works/W4403159969.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W1966504330","https://openalex.org/W1979139803","https://openalex.org/W2037631372","https://openalex.org/W2030889776","https://openalex.org/W2159000141","https://openalex.org/W3015759778","https://openalex.org/W2088520467","https://openalex.org/W2075763133","https://openalex.org/W2376423713","https://openalex.org/W1583600832"],"abstract_inverted_index":{"Time":[0],"to":[1,31,47,75,111],"biochemical":[2,63],"recurrence":[3,48,64],"in":[4],"prostate":[5],"cancer":[6],"is":[7],"essential":[8],"for":[9,44,62],"prognostic":[10],"monitoring":[11],"of":[12,15,23,85],"the":[13,21,24,45,57,66,95,106,112],"progression":[14],"patients":[16],"after":[17],"prostatectomy,":[18],"which":[19],"assesses":[20],"efficacy":[22],"surgery.":[25],"In":[26],"this":[27],"work,":[28],"we":[29],"proposed":[30],"leverage":[32],"multiple":[33],"instance":[34],"learning":[35],"through":[36],"a":[37,81],"two-stage":[38],"``thinking":[39],"fast":[40],"\\&":[41],"slow''":[42],"strategy":[43],"time":[46],"(TTR)":[49],"prediction.":[50,114],"The":[51],"first":[52],"(``thinking":[53,68],"fast'')":[54],"stage":[55,70],"finds":[56],"most":[58,107],"relevant":[59],"WSI":[60],"area":[61,109],"and":[65,92],"second":[67],"slow'')":[69],"leverages":[71],"higher":[72],"resolution":[73],"patches":[74],"predict":[76],"TTR.":[77],"Our":[78],"approach":[79],"reveals":[80],"mean":[82],"C-index":[83],"($Ci$)":[84],"0.733":[86],"($\u03b8=0.059$)":[87],"on":[88,94],"our":[89],"internal":[90],"validation":[91,98],"$Ci=0.603$":[93],"LEOPARD":[96],"challenge":[97],"set.":[99],"Post":[100],"hoc":[101],"attention":[102],"visualization":[103],"shows":[104],"that":[105],"attentive":[108],"contributes":[110],"TTR":[113]},"counts_by_year":[],"updated_date":"2026-03-07T16:01:11.037858","created_date":"2025-10-10T00:00:00"}