{"id":"https://openalex.org/W4391212782","doi":"https://doi.org/10.48550/arxiv.2401.12930","title":"pyAKI -- An Open Source Solution to Automated KDIGO classification","display_name":"pyAKI -- An Open Source Solution to Automated KDIGO classification","publication_year":2024,"publication_date":"2024-01-23","ids":{"openalex":"https://openalex.org/W4391212782","doi":"https://doi.org/10.48550/arxiv.2401.12930"},"language":"en","primary_location":{"id":"pmh:oai:arXiv.org:2401.12930","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2401.12930","pdf_url":"https://arxiv.org/pdf/2401.12930","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"type":"preprint","indexed_in":["arxiv","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2401.12930","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023483618","display_name":"Christian Porschen","orcid":"https://orcid.org/0000-0001-5355-4531"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Porschen, Christian","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047848421","display_name":"Jan Ernsting","orcid":"https://orcid.org/0000-0003-4649-2111"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ernsting, Jan","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093784869","display_name":"Paul Brauckmann","orcid":"https://orcid.org/0009-0002-8163-0989"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Brauckmann, Paul","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031471398","display_name":"Raphael Wei\u00df","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Weiss, Raphael","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005585296","display_name":"Till J. W\u00fcrdemann","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"W\u00fcrdemann, Till","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000419476","display_name":"Hendrik Booke","orcid":"https://orcid.org/0000-0002-0227-7367"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Booke, Hendrik","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093784870","display_name":"Wida Amini","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Amini, Wida","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092582717","display_name":"Ludwig Maidowski","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Maidowski, Ludwig","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003115770","display_name":"Benjamin Risse","orcid":"https://orcid.org/0000-0001-5691-4029"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Risse, Benjamin","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036108757","display_name":"Tim Hahn","orcid":"https://orcid.org/0000-0002-8929-4134"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hahn, Tim","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5000766210","display_name":"Thilo von Groote","orcid":"https://orcid.org/0000-0002-5287-1137"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"von Groote, Thilo","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5023483618"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12205","display_name":"Time Series Analysis and Forecasting","score":0.9620000123977661,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12205","display_name":"Time Series Analysis and Forecasting","score":0.9620000123977661,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10144","display_name":"Blood Pressure and Hypertension Studies","score":0.9387000203132629,"subfield":{"id":"https://openalex.org/subfields/2705","display_name":"Cardiology and Cardiovascular Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.916700005531311,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workload","display_name":"Workload","score":0.796600341796875},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.6909740567207336},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.6294451951980591},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5758712887763977},{"id":"https://openalex.org/keywords/acute-kidney-injury","display_name":"Acute kidney injury","score":0.5633427500724792},{"id":"https://openalex.org/keywords/intensive-care","display_name":"Intensive care","score":0.48112979531288147},{"id":"https://openalex.org/keywords/data-source","display_name":"Data source","score":0.44526922702789307},{"id":"https://openalex.org/keywords/open-data","display_name":"Open data","score":0.41104137897491455},{"id":"https://openalex.org/keywords/work","display_name":"Work (physics)","score":0.4101673662662506},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3944050371646881},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.33679163455963135},{"id":"https://openalex.org/keywords/intensive-care-medicine","display_name":"Intensive care medicine","score":0.30843615531921387},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1676478087902069},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.08133748173713684}],"concepts":[{"id":"https://openalex.org/C2778476105","wikidata":"https://www.wikidata.org/wiki/Q628539","display_name":"Workload","level":2,"score":0.796600341796875},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.6909740567207336},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.6294451951980591},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5758712887763977},{"id":"https://openalex.org/C2780472472","wikidata":"https://www.wikidata.org/wiki/Q424337","display_name":"Acute kidney injury","level":2,"score":0.5633427500724792},{"id":"https://openalex.org/C2987404301","wikidata":"https://www.wikidata.org/wiki/Q679690","display_name":"Intensive care","level":2,"score":0.48112979531288147},{"id":"https://openalex.org/C2983685735","wikidata":"https://www.wikidata.org/wiki/Q5227355","display_name":"Data source","level":2,"score":0.44526922702789307},{"id":"https://openalex.org/C2780535194","wikidata":"https://www.wikidata.org/wiki/Q309901","display_name":"Open data","level":2,"score":0.41104137897491455},{"id":"https://openalex.org/C18762648","wikidata":"https://www.wikidata.org/wiki/Q42213","display_name":"Work (physics)","level":2,"score":0.4101673662662506},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3944050371646881},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.33679163455963135},{"id":"https://openalex.org/C177713679","wikidata":"https://www.wikidata.org/wiki/Q679690","display_name":"Intensive care medicine","level":1,"score":0.30843615531921387},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1676478087902069},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.08133748173713684},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:arXiv.org:2401.12930","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2401.12930","pdf_url":"https://arxiv.org/pdf/2401.12930","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"doi:10.48550/arxiv.2401.12930","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2401.12930","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2401.12930","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2401.12930","pdf_url":"https://arxiv.org/pdf/2401.12930","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[{"score":0.49000000953674316,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4391212782.pdf"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2326933351","https://openalex.org/W2416005624","https://openalex.org/W2400751427","https://openalex.org/W3135720188","https://openalex.org/W2786702525","https://openalex.org/W2186735017","https://openalex.org/W4214510226","https://openalex.org/W18403121","https://openalex.org/W3089240373","https://openalex.org/W4386133355"],"abstract_inverted_index":{"Acute":[0],"Kidney":[1,33],"Injury":[2],"(AKI)":[3],"is":[4],"a":[5,45,65,81,93,103],"frequent":[6],"complication":[7],"in":[8,18,97,107,120],"critically":[9],"ill":[10],"patients,":[11],"affecting":[12],"up":[13],"to":[14,40,109,129],"50%":[15],"of":[16,25,83,133],"patients":[17],"the":[19,32,84,131,146],"intensive":[20],"care":[21,99],"units.":[22],"The":[23,73],"lack":[24],"standardized":[26,104],"and":[27,50,78,159],"open-source":[28,58,142],"tools":[29],"for":[30,68,88,144,149],"applying":[31],"Disease":[34],"Improving":[35],"Global":[36],"Outcomes":[37],"(KDIGO)":[38],"criteria":[39,71,148],"time":[41,153],"series":[42,154],"data":[43,105,155],"has":[44],"negative":[46],"impact":[47],"on":[48],"workload":[49],"study":[51],"quality.":[52],"This":[53,136],"project":[54],"introduces":[55,138],"pyAKI,":[56],"an":[57,141],"pipeline":[59,75],"addressing":[60],"this":[61],"gap":[62],"by":[63],"providing":[64],"comprehensive":[66],"solution":[67,143],"consistent":[69],"KDIGO":[70,122,147],"implementation.":[72],"pyAKI":[74,139],"was":[76],"developed":[77],"validated":[79],"using":[80,152],"subset":[82],"Medical":[85],"Information":[86],"Mart":[87],"Intensive":[89],"Care":[90],"(MIMIC)-IV":[91],"database,":[92],"commonly":[94],"used":[95],"database":[96],"critical":[98],"research.":[100],"We":[101],"defined":[102],"model":[106],"order":[108],"ensure":[110],"reproducibility.":[111],"Validation":[112],"against":[113],"expert":[114],"annotations":[115],"demonstrated":[116],"pyAKI's":[117],"robust":[118],"performance":[119],"implementing":[121,145],"criteria.":[123],"Comparative":[124],"analysis":[125],"revealed":[126],"its":[127],"ability":[128],"surpass":[130],"quality":[132],"human":[134],"labels.":[135],"work":[137],"as":[140],"AKI":[150],"diagnosis":[151],"with":[156],"high":[157],"accuracy":[158],"performance.":[160]},"counts_by_year":[],"updated_date":"2026-03-11T14:59:36.786465","created_date":"2025-10-10T00:00:00"}
