{"id":"https://openalex.org/W4386907038","doi":"https://doi.org/10.48550/arxiv.2309.10016","title":"Evaluation of GPT-3 for Anti-Cancer Drug Sensitivity Prediction","display_name":"Evaluation of GPT-3 for Anti-Cancer Drug Sensitivity Prediction","publication_year":2023,"publication_date":"2023-09-18","ids":{"openalex":"https://openalex.org/W4386907038","doi":"https://doi.org/10.48550/arxiv.2309.10016"},"language":"en","primary_location":{"id":"pmh:oai:arXiv.org:2309.10016","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2309.10016","pdf_url":"https://arxiv.org/pdf/2309.10016","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"type":"preprint","indexed_in":["arxiv","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2309.10016","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101209072","display_name":"Shaika Chowdhury","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Chowdhury, Shaika","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052014741","display_name":"Sivaraman Rajaganapathy","orcid":"https://orcid.org/0000-0003-4582-7274"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rajaganapathy, Sivaraman","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015105117","display_name":"Lichao Sun","orcid":"https://orcid.org/0000-0003-1539-7939"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sun, Lichao","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076621021","display_name":"James R. Cerhan","orcid":"https://orcid.org/0000-0002-7482-178X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Cerhan, James","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5019653651","display_name":"Nansu Zong","orcid":"https://orcid.org/0000-0003-0066-9524"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zong, Nansu","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101209072"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9866999983787537,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9764000177383423,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pharmacogenomics","display_name":"Pharmacogenomics","score":0.8598803281784058},{"id":"https://openalex.org/keywords/drug-response","display_name":"Drug response","score":0.7037612199783325},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.6922286748886108},{"id":"https://openalex.org/keywords/sensitivity","display_name":"Sensitivity (control systems)","score":0.6146582961082458},{"id":"https://openalex.org/keywords/cancer-drugs","display_name":"Cancer drugs","score":0.5001730918884277},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.44693902134895325},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4279940724372864},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4138239026069641},{"id":"https://openalex.org/keywords/oncology","display_name":"Oncology","score":0.4058692753314972},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.37424203753471375},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.33993762731552124},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3281996250152588},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.27479875087738037},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23275265097618103},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10900521278381348}],"concepts":[{"id":"https://openalex.org/C170734499","wikidata":"https://www.wikidata.org/wiki/Q1152227","display_name":"Pharmacogenomics","level":2,"score":0.8598803281784058},{"id":"https://openalex.org/C2994119904","wikidata":"https://www.wikidata.org/wiki/Q1251001","display_name":"Drug response","level":3,"score":0.7037612199783325},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.6922286748886108},{"id":"https://openalex.org/C21200559","wikidata":"https://www.wikidata.org/wiki/Q7451068","display_name":"Sensitivity (control systems)","level":2,"score":0.6146582961082458},{"id":"https://openalex.org/C3020340455","wikidata":"https://www.wikidata.org/wiki/Q974135","display_name":"Cancer drugs","level":3,"score":0.5001730918884277},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44693902134895325},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4279940724372864},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4138239026069641},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.4058692753314972},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.37424203753471375},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.33993762731552124},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3281996250152588},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.27479875087738037},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23275265097618103},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10900521278381348},{"id":"https://openalex.org/C24326235","wikidata":"https://www.wikidata.org/wiki/Q126095","display_name":"Electronic engineering","level":1,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:arXiv.org:2309.10016","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2309.10016","pdf_url":"https://arxiv.org/pdf/2309.10016","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"doi:10.48550/arxiv.2309.10016","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2309.10016","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2309.10016","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2309.10016","pdf_url":"https://arxiv.org/pdf/2309.10016","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[{"score":0.8299999833106995,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2291634352","display_name":null,"funder_award_id":"R00GM135488","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G3497591915","display_name":null,"funder_award_id":"(NIH)","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4359693134","display_name":null,"funder_award_id":"NIGMS","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4386907038.pdf","grobid_xml":"https://content.openalex.org/works/W4386907038.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4231349869","https://openalex.org/W2896304141","https://openalex.org/W4239789534","https://openalex.org/W4387225326","https://openalex.org/W2019271482","https://openalex.org/W1537547840","https://openalex.org/W4392425672","https://openalex.org/W2563611238","https://openalex.org/W2117099437","https://openalex.org/W134690430"],"abstract_inverted_index":{"In":[0],"this":[1,53],"study,":[2],"we":[3],"investigated":[4],"the":[5,10,47,56,60],"potential":[6,57],"of":[7,46],"GPT-3":[8],"for":[9,62],"anti-cancer":[11],"drug":[12,48],"sensitivity":[13],"prediction":[14],"task":[15],"using":[16],"structured":[17],"pharmacogenomics":[18],"data":[19],"across":[20],"five":[21],"tissue":[22],"types":[23],"and":[24,31,38],"evaluated":[25],"its":[26],"performance":[27],"with":[28],"zero-shot":[29],"prompting":[30],"fine-tuning":[32],"paradigms.":[33],"The":[34,50],"drug's":[35],"smile":[36],"representation":[37],"cell":[39],"line's":[40],"genomic":[41],"mutation":[42],"features":[43],"were":[44],"predictive":[45],"response.":[49],"results":[51],"from":[52],"study":[54],"have":[55],"to":[58],"pave":[59],"way":[61],"designing":[63],"more":[64],"efficient":[65],"treatment":[66],"protocols":[67],"in":[68],"precision":[69],"oncology.":[70]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
