{"id":"https://openalex.org/W4386555226","doi":"https://doi.org/10.48550/arxiv.2309.03652","title":"Anatomy-informed Data Augmentation for Enhanced Prostate Cancer Detection","display_name":"Anatomy-informed Data Augmentation for Enhanced Prostate Cancer Detection","publication_year":2023,"publication_date":"2023-09-07","ids":{"openalex":"https://openalex.org/W4386555226","doi":"https://doi.org/10.48550/arxiv.2309.03652"},"language":"en","primary_location":{"id":"pmh:oai:arXiv.org:2309.03652","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2309.03652","pdf_url":"https://arxiv.org/pdf/2309.03652","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":null},"type":"preprint","indexed_in":["arxiv","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2309.03652","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032077148","display_name":"B\u00e1lint Kov\u00e0cs","orcid":"https://orcid.org/0000-0002-1191-0646"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Kovacs, Balint","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040323777","display_name":"Nils Netzer","orcid":"https://orcid.org/0000-0001-5805-0535"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Netzer, Nils","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101474595","display_name":"Michael Baumgartner","orcid":"https://orcid.org/0000-0003-4455-9917"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Baumgartner, Michael","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092558574","display_name":"Carolin Eith","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Eith, Carolin","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076157815","display_name":"Dimitrios Bounias","orcid":"https://orcid.org/0000-0002-3361-1698"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bounias, Dimitrios","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092631501","display_name":"Clara Meinzer","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Meinzer, Clara","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020482673","display_name":"Paul F. Jaeger","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jaeger, Paul F.","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048303771","display_name":"Kevin S. Zhang","orcid":"https://orcid.org/0000-0002-3611-5550"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zhang, Kevin S.","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056850855","display_name":"Ralf Floca","orcid":"https://orcid.org/0000-0003-3218-3377"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Floca, Ralf","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021481459","display_name":"A.J. Schrader","orcid":"https://orcid.org/0000-0003-2112-0928"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Schrader, Adrian","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072647800","display_name":"Fabian Isensee","orcid":"https://orcid.org/0000-0002-3519-5886"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Isensee, Fabian","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018657449","display_name":"Regula Gnirs","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Gnirs, Regula","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114080901","display_name":"Magdalena Goertz","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Goertz, Magdalena","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076780590","display_name":"Viktoria Schuetz","orcid":"https://orcid.org/0000-0003-2179-747X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Schuetz, Viktoria","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026607584","display_name":"Albrecht Stenzinger","orcid":"https://orcid.org/0000-0003-1001-103X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Stenzinger, Albrecht","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046084721","display_name":"Markus Hohenfellner","orcid":"https://orcid.org/0000-0003-3798-2039"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hohenfellner, Markus","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005295293","display_name":"Heinz\u2010Peter Schlemmer","orcid":"https://orcid.org/0000-0002-9291-0954"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Schlemmer, Heinz-Peter","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029228546","display_name":"Ivo Wolf","orcid":"https://orcid.org/0000-0002-6519-6484"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wolf, Ivo","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020514397","display_name":"David Bonekamp","orcid":"https://orcid.org/0000-0002-4811-0087"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bonekamp, David","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5027292126","display_name":"Klaus Maier\u2010Hein","orcid":"https://orcid.org/0000-0002-6626-2463"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Maier-Hein, Klaus H.","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":20,"corresponding_author_ids":["https://openalex.org/A5032077148"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10775","display_name":"Generative Adversarial Networks and Image Synthesis","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/prostate-cancer","display_name":"Prostate cancer","score":0.7145146131515503},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6561166644096375},{"id":"https://openalex.org/keywords/transformation","display_name":"Transformation (genetics)","score":0.6369910836219788},{"id":"https://openalex.org/keywords/cancer-detection","display_name":"Cancer detection","score":0.6178409457206726},{"id":"https://openalex.org/keywords/limiting","display_name":"Limiting","score":0.5715113282203674},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.526141881942749},{"id":"https://openalex.org/keywords/prostate","display_name":"Prostate","score":0.5108261108398438},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5099660158157349},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.44495099782943726},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4210375249385834},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.36743074655532837},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3331241011619568},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.3102381229400635},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.27989768981933594},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08646377921104431},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.07914707064628601}],"concepts":[{"id":"https://openalex.org/C2780192828","wikidata":"https://www.wikidata.org/wiki/Q181257","display_name":"Prostate cancer","level":3,"score":0.7145146131515503},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6561166644096375},{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.6369910836219788},{"id":"https://openalex.org/C2985322473","wikidata":"https://www.wikidata.org/wiki/Q3044843","display_name":"Cancer detection","level":3,"score":0.6178409457206726},{"id":"https://openalex.org/C188198153","wikidata":"https://www.wikidata.org/wiki/Q1613840","display_name":"Limiting","level":2,"score":0.5715113282203674},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.526141881942749},{"id":"https://openalex.org/C2776235491","wikidata":"https://www.wikidata.org/wiki/Q9625","display_name":"Prostate","level":3,"score":0.5108261108398438},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5099660158157349},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.44495099782943726},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4210375249385834},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.36743074655532837},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3331241011619568},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.3102381229400635},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.27989768981933594},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08646377921104431},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.07914707064628601},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:arXiv.org:2309.03652","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2309.03652","pdf_url":"https://arxiv.org/pdf/2309.03652","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":null},{"id":"doi:10.48550/arxiv.2309.03652","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2309.03652","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2309.03652","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2309.03652","pdf_url":"https://arxiv.org/pdf/2309.03652","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":null},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.7300000190734863,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4243145179","https://openalex.org/W4255875982","https://openalex.org/W4244853958","https://openalex.org/W299695548","https://openalex.org/W2029404707","https://openalex.org/W3015759778","https://openalex.org/W2088520467","https://openalex.org/W2075763133","https://openalex.org/W2376423713","https://openalex.org/W1583600832"],"abstract_inverted_index":{"Data":[0],"augmentation":[1,123,141],"(DA)":[2],"is":[3],"a":[4,75,125,133],"key":[5],"factor":[6],"in":[7,13,54],"medical":[8],"image":[9],"analysis,":[10],"such":[11,40],"as":[12,48,50],"prostate":[14,92],"cancer":[15],"(PCa)":[16],"detection":[17,138],"on":[18,28,124],"magnetic":[19],"resonance":[20],"images.":[21],"State-of-the-art":[22],"computer-aided":[23],"diagnosis":[24],"systems":[25],"still":[26],"rely":[27],"simplistic":[29],"spatial":[30],"transformations":[31],"to":[32,62,64,85,103],"preserve":[33],"the":[34,46,55,59,91,119],"pathological":[35],"label":[36],"post":[37],"transformation.":[38],"However,":[39],"augmentations":[41],"do":[42],"not":[43],"substantially":[44],"increase":[45],"organ":[47],"well":[49],"tumor":[51],"shape":[52],"variability":[53],"training":[56],"set,":[57],"limiting":[58],"model's":[60],"ability":[61],"generalize":[63],"unseen":[65],"cases":[66],"with":[67,139],"more":[68],"diverse":[69],"localized":[70],"soft-tissue":[71],"deformations.":[72],"We":[73,117],"propose":[74],"new":[76],"anatomy-informed":[77],"transformation":[78],"that":[79],"leverages":[80],"information":[81],"from":[82],"adjacent":[83],"organs":[84],"simulate":[86],"typical":[87],"physiological":[88],"deformations":[89],"of":[90,121,127],"and":[93],"generates":[94],"unique":[95],"lesion":[96],"shapes":[97],"without":[98],"altering":[99],"their":[100],"label.":[101],"Due":[102],"its":[104],"lightweight":[105],"computational":[106],"requirements,":[107],"it":[108],"can":[109],"be":[110],"easily":[111],"integrated":[112],"into":[113],"common":[114],"DA":[115],"frameworks.":[116],"demonstrate":[118],"effectiveness":[120],"our":[122],"dataset":[126],"774":[128],"biopsy-confirmed":[129],"examinations,":[130],"by":[131],"evaluating":[132],"state-of-the-art":[134],"method":[135],"for":[136],"PCa":[137],"different":[140],"settings.":[142]},"counts_by_year":[],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
