{"id":"https://openalex.org/W4399777759","doi":"https://doi.org/10.47989/ir292363","title":"Metadata functional requirements for genomic data practice and curation","display_name":"Metadata functional requirements for genomic data practice and curation","publication_year":2024,"publication_date":"2024-06-18","ids":{"openalex":"https://openalex.org/W4399777759","doi":"https://doi.org/10.47989/ir292363"},"language":"en","primary_location":{"id":"doi:10.47989/ir292363","is_oa":true,"landing_page_url":"https://doi.org/10.47989/ir292363","pdf_url":"https://informationr.net/infres/article/download/363/335","source":{"id":"https://openalex.org/S4210195660","display_name":"Information Research an international electronic journal","issn_l":"1368-1613","issn":["1368-1613"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310317106","host_organization_name":"University of Bor\u00e5s","host_organization_lineage":["https://openalex.org/P4310317106"],"host_organization_lineage_names":["University of Bor\u00e5s"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information Research an international electronic journal","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://informationr.net/infres/article/download/363/335","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023265280","display_name":"Hong Huang","orcid":"https://orcid.org/0000-0002-8957-4881"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hong Huang","raw_affiliation_strings":["University of South Florida"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of South Florida","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041928722","display_name":"Jian Qin","orcid":"https://orcid.org/0000-0002-7094-2867"},"institutions":[{"id":"https://openalex.org/I70983195","display_name":"Syracuse University","ror":"https://ror.org/025r5qe02","country_code":"US","type":"education","lineage":["https://openalex.org/I70983195"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jian Qin","raw_affiliation_strings":["Information Science at Syracuse University iSchool"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Information Science at Syracuse University iSchool","institution_ids":["https://openalex.org/I70983195"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.6895,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.74274822,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"29","issue":"2","first_page":"3","last_page":"29"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.8978999853134155,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.8978999853134155,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.8778260946273804},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.7159180641174316},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5626444816589355},{"id":"https://openalex.org/keywords/digital-curation","display_name":"Digital curation","score":0.47135940194129944},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.35083070397377014},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.35023385286331177},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3452574610710144},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3360218405723572},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.24230211973190308}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.8778260946273804},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.7159180641174316},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5626444816589355},{"id":"https://openalex.org/C2775953033","wikidata":"https://www.wikidata.org/wiki/Q5276060","display_name":"Digital curation","level":2,"score":0.47135940194129944},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.35083070397377014},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.35023385286331177},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3452574610710144},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3360218405723572},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.24230211973190308}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.47989/ir292363","is_oa":true,"landing_page_url":"https://doi.org/10.47989/ir292363","pdf_url":"https://informationr.net/infres/article/download/363/335","source":{"id":"https://openalex.org/S4210195660","display_name":"Information Research an international electronic journal","issn_l":"1368-1613","issn":["1368-1613"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310317106","host_organization_name":"University of Bor\u00e5s","host_organization_lineage":["https://openalex.org/P4310317106"],"host_organization_lineage_names":["University of Bor\u00e5s"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information Research an international electronic journal","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:9ff4447a5c354853847e57398eeed8b0","is_oa":true,"landing_page_url":"https://doaj.org/article/9ff4447a5c354853847e57398eeed8b0","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Information Research: An International Electronic Journal, Vol 29, Iss 2 (2024)","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:b5cc2e651f874873aa3aeea3e96d2db1","is_oa":false,"landing_page_url":"https://doaj.org/article/b5cc2e651f874873aa3aeea3e96d2db1","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Information Research: An International Electronic Journal, Vol 29, Iss 2, Pp 3-29 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.47989/ir292363","is_oa":true,"landing_page_url":"https://doi.org/10.47989/ir292363","pdf_url":"https://informationr.net/infres/article/download/363/335","source":{"id":"https://openalex.org/S4210195660","display_name":"Information Research an international electronic journal","issn_l":"1368-1613","issn":["1368-1613"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310317106","host_organization_name":"University of Bor\u00e5s","host_organization_lineage":["https://openalex.org/P4310317106"],"host_organization_lineage_names":["University of Bor\u00e5s"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information Research an international electronic journal","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.44999998807907104,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"},{"score":0.4300000071525574,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4399777759.pdf"},"referenced_works_count":64,"referenced_works":["https://openalex.org/W22495568","https://openalex.org/W1490137556","https://openalex.org/W1556808170","https://openalex.org/W1965144037","https://openalex.org/W1968528175","https://openalex.org/W1968855642","https://openalex.org/W1969935418","https://openalex.org/W1985157738","https://openalex.org/W2013447902","https://openalex.org/W2018762316","https://openalex.org/W2020336239","https://openalex.org/W2021074129","https://openalex.org/W2023116290","https://openalex.org/W2032035020","https://openalex.org/W2036288429","https://openalex.org/W2040704692","https://openalex.org/W2042160423","https://openalex.org/W2050194823","https://openalex.org/W2055214702","https://openalex.org/W2060993546","https://openalex.org/W2070768085","https://openalex.org/W2079548033","https://openalex.org/W2079551434","https://openalex.org/W2086835855","https://openalex.org/W2089886875","https://openalex.org/W2091359547","https://openalex.org/W2095410297","https://openalex.org/W2100599058","https://openalex.org/W2101068469","https://openalex.org/W2107706580","https://openalex.org/W2108491719","https://openalex.org/W2113142309","https://openalex.org/W2113310608","https://openalex.org/W2114587116","https://openalex.org/W2115523386","https://openalex.org/W2117847326","https://openalex.org/W2123152121","https://openalex.org/W2126382397","https://openalex.org/W2126396457","https://openalex.org/W2129687578","https://openalex.org/W2133787379","https://openalex.org/W2134865903","https://openalex.org/W2140990683","https://openalex.org/W2145116858","https://openalex.org/W2147753581","https://openalex.org/W2156606118","https://openalex.org/W2159327312","https://openalex.org/W2159386597","https://openalex.org/W2164297666","https://openalex.org/W2165524816","https://openalex.org/W2302501749","https://openalex.org/W2335932981","https://openalex.org/W2745007484","https://openalex.org/W2784231776","https://openalex.org/W2789238979","https://openalex.org/W2804142383","https://openalex.org/W2809049975","https://openalex.org/W2888267700","https://openalex.org/W2897187798","https://openalex.org/W2901865066","https://openalex.org/W2908425807","https://openalex.org/W4213286107","https://openalex.org/W4244393794","https://openalex.org/W4394648340"],"related_works":["https://openalex.org/W2400390830","https://openalex.org/W2598248896","https://openalex.org/W2907605431","https://openalex.org/W842882028","https://openalex.org/W2138555252","https://openalex.org/W2807479512","https://openalex.org/W2277259138","https://openalex.org/W3135458263","https://openalex.org/W4231012597","https://openalex.org/W3200944274"],"abstract_inverted_index":{"Introduction.":[0],"The":[1,56,74,95,148,165,194,237],"rapid":[2],"accumulation":[3],"of":[4,22,39,118,129,150],"genomic":[5,23,84,173],"data":[6,60,97,185,212,220,233,250],"and":[7,13,20,113,163,178,187,217,219,235,252,258],"their":[8],"widespread":[9],"reuse":[10],"in":[11,29,134,153,190,206],"clinical":[12],"scientific":[14],"practice":[15],"demands":[16],"more":[17],"effective":[18],"description":[19],"organization":[21],"information,":[24],"which":[25],"poses":[26],"new":[27,53],"challenges":[28],"developing":[30,259],"metadata":[31,40,68,79,85,132,140,181,201,230,239,256],"schemas.":[32],"Based":[33],"on":[34],"a":[35,48],"previously":[36],"developed":[37,200],"taxonomy":[38],"requirements,":[41],"this":[42],"paper":[43],"reports":[44],"the":[45,78,88,100,119,135,172,204],"results":[46,121,169],"from":[47,61,81],"survey":[49,57,96],"that":[50,123,171,197],"addresses":[51],"these":[52,151],"challenges.":[54],"Method.":[55],"gathered":[58],"empirical":[59,120],"156":[62],"genomics":[63,124,198],"scientists":[64,125,199],"to":[65,104,144,183,202,211,231,247],"identify":[66],"context-sensitive":[67],"functional":[69,89],"models":[70],"for":[71,91,131,254],"genome":[72,92,191,207,248],"curation.":[73,192],"study":[75],"further":[76],"investigated":[77],"elements":[80,182],"four":[82],"well-known":[83],"schemes":[86],"against":[87],"requirements":[90,141],"metadata.":[93],"Analysis.":[94],"were":[98,142],"employed":[99],"statistical":[101],"package":[102],"STATA,":[103],"produce":[105],"descriptive":[106],"statistics,":[107],"factor":[108,146],"analysis,":[109],"Fisher\u2019s":[110],"exact":[111,167],"test,":[112],"related":[114,180,210],"reports.":[115],"Results.":[116],"Analysis":[117],"revealed":[122,170],"recognize":[126],"specific":[127],"sets":[128],"criteria":[130],"needs":[133,205,227],"genome-curation":[136],"context.":[137],"Twenty":[138],"one":[139],"reduced":[143],"five":[145],"constructs.":[147],"ranking":[149],"constructs":[152],"decreasing":[154],"order":[155],"is:":[156],"portability,":[157],"reusability,":[158],"manipulability,":[159],"sufficiency,":[160],"interoperability,":[161],"extensibility,":[162],"modularity.":[164],"Fisher":[166],"test":[168],"community":[174],"required":[175],"rich":[176],"context":[177],"technical":[179],"facilitate":[184],"exchanges":[186],"experimental":[188],"operations":[189],"Conclusion.":[193],"findings":[195],"indicated":[196],"meet":[203],"curation":[208],"activities":[209],"wrangling,":[213],"integrations":[214],"across":[215],"platforms":[216],"databases,":[218],"reuse.":[221],"Architectural":[222],"layout":[223],"as":[224,244],"flat":[225],"file":[226],"extra":[228],"administrative":[229],"support":[232],"sharing":[234],"documentation.":[236],"resulting":[238],"requirement":[240],"model":[241],"can":[242],"serve":[243],"valuable":[245],"resources":[246],"scientists,":[249],"curators":[251],"administrators":[253],"designing":[255],"schema":[257],"data-curation":[260],"policies.":[261]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
