{"id":"https://openalex.org/W2046865830","doi":"https://doi.org/10.4304/jsw.8.2.316-319","title":"Target Identification and Target-centered Network Construction from Biomedical Literature","display_name":"Target Identification and Target-centered Network Construction from Biomedical Literature","publication_year":2013,"publication_date":"2013-02-01","ids":{"openalex":"https://openalex.org/W2046865830","doi":"https://doi.org/10.4304/jsw.8.2.316-319","mag":"2046865830"},"language":"en","primary_location":{"id":"doi:10.4304/jsw.8.2.316-319","is_oa":false,"landing_page_url":"https://doi.org/10.4304/jsw.8.2.316-319","pdf_url":null,"source":{"id":"https://openalex.org/S114141714","display_name":"Journal of Software","issn_l":"1796-217X","issn":["1796-217X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318660","host_organization_name":"Academy Publisher","host_organization_lineage":["https://openalex.org/P4310318660"],"host_organization_lineage_names":["Academy Publisher"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Software","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100692171","display_name":"Lejun Gong","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lejun Gong","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079583479","display_name":"Yunyang Yan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yunyang Yan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5071168277","display_name":"Xiao Sun","orcid":"https://orcid.org/0000-0002-7551-8862"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xiao Sun","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.1475,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.56229032,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"8","issue":"2","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9767000079154968,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.9066800475120544},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.7455360889434814},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.38291049003601074},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3323948383331299}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.9066800475120544},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7455360889434814},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.38291049003601074},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3323948383331299},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.4304/jsw.8.2.316-319","is_oa":false,"landing_page_url":"https://doi.org/10.4304/jsw.8.2.316-319","pdf_url":null,"source":{"id":"https://openalex.org/S114141714","display_name":"Journal of Software","issn_l":"1796-217X","issn":["1796-217X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318660","host_organization_name":"Academy Publisher","host_organization_lineage":["https://openalex.org/P4310318660"],"host_organization_lineage_names":["Academy Publisher"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Software","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4300000071525574,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W2003458432","https://openalex.org/W2028578434","https://openalex.org/W2047360869","https://openalex.org/W2097771645","https://openalex.org/W2103017472","https://openalex.org/W2103987857","https://openalex.org/W2107580398","https://openalex.org/W2129113459","https://openalex.org/W2139259976","https://openalex.org/W2143353625","https://openalex.org/W2163107094","https://openalex.org/W4240545411","https://openalex.org/W4320800138","https://openalex.org/W6651049907"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2350741829","https://openalex.org/W2130043461","https://openalex.org/W2530322880","https://openalex.org/W1596801655"],"abstract_inverted_index":{"With":[0],"the":[1,9,59,68,74,96],"explosion":[2],"of":[3,47,61],"biological":[4],"data":[5],"and":[6,34,54,57,88],"information":[7],"in":[8],"omics":[10],"era,":[11],"text":[12,109],"mining":[13,110],"is":[14,105],"becoming":[15],"increasingly":[16],"crucial":[17],"for":[18,31,95,112],"biomedical":[19,24,39,48,113],"researchers":[20],"to":[21,107],"find":[22],"relevant":[23],"knowledge.":[25],"This":[26],"paper":[27],"presents":[28],"an":[29,89],"approach":[30,42,104],"target":[32],"identification":[33],"target-centered":[35,62],"network":[36,63],"construction":[37],"from":[38],"literature.":[40],"The":[41],"can":[43],"identify":[44],"several":[45],"types":[46],"targets":[49],"using":[50],"finite":[51],"state":[52],"machine":[53],"ontology-based":[55],"approach,":[56,75],"offer":[58],"implementation":[60],"which":[64,80],"could":[65],"directly":[66],"illustrate":[67],"relationships":[69],"among":[70],"targets.":[71],"To":[72],"validate":[73],"we":[76],"developed":[77],"a":[78,82,85],"system":[79],"achieved":[81],"recall":[83],"79.5%,":[84],"precision":[86],"83.1%,":[87],"F-":[90],"score":[91],"81.0%":[92],"on":[93],"average":[94],"test":[97],"datasets.":[98],"Experimental":[99],"results":[100],"show":[101],"that":[102],"our":[103],"promising":[106],"develop":[108],"tool":[111],"researchers.":[114]},"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
