{"id":"https://openalex.org/W2071567712","doi":"https://doi.org/10.4304/jcp.9.9.2151-2158","title":"Ontology Engineering Techniques for Biological Data","display_name":"Ontology Engineering Techniques for Biological Data","publication_year":2014,"publication_date":"2014-08-15","ids":{"openalex":"https://openalex.org/W2071567712","doi":"https://doi.org/10.4304/jcp.9.9.2151-2158","mag":"2071567712"},"language":"en","primary_location":{"id":"doi:10.4304/jcp.9.9.2151-2158","is_oa":false,"landing_page_url":"https://doi.org/10.4304/jcp.9.9.2151-2158","pdf_url":null,"source":{"id":"https://openalex.org/S77894049","display_name":"Journal of Computers","issn_l":"1796-203X","issn":["1796-203X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318660","host_organization_name":"Academy Publisher","host_organization_lineage":["https://openalex.org/P4310318660"],"host_organization_lineage_names":["Academy Publisher"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computers","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043290031","display_name":"Asma Fardoos","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Asma Fardoos","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027937970","display_name":"Jamshaid Iqbal Janjua","orcid":null},"institutions":[{"id":"https://openalex.org/I142732210","display_name":"University of Engineering and Technology Lahore","ror":"https://ror.org/0051w2v06","country_code":"PK","type":"education","lineage":["https://openalex.org/I142732210"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Jamshaid Iqbal Janjua","raw_affiliation_strings":["University of Engineering and Technology, Lahore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Engineering and Technology, Lahore","institution_ids":["https://openalex.org/I142732210"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047103056","display_name":"Amjad Farooq","orcid":"https://orcid.org/0000-0001-5646-3598"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Amjad Farooq","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.10023205,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"9","issue":"9","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10679","display_name":"Service-Oriented Architecture and Web Services","score":0.9833999872207642,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8080911636352539},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7731482982635498},{"id":"https://openalex.org/keywords/correctness","display_name":"Correctness","score":0.7137048840522766},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.6856864094734192},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.6352188587188721},{"id":"https://openalex.org/keywords/process-ontology","display_name":"Process ontology","score":0.5865887403488159},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5490952134132385},{"id":"https://openalex.org/keywords/completeness","display_name":"Completeness (order theory)","score":0.5448662042617798},{"id":"https://openalex.org/keywords/ontology-engineering","display_name":"Ontology engineering","score":0.46952763199806213},{"id":"https://openalex.org/keywords/upper-ontology","display_name":"Upper ontology","score":0.45637309551239014},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.4556955397129059},{"id":"https://openalex.org/keywords/disjoint-sets","display_name":"Disjoint sets","score":0.4455999732017517},{"id":"https://openalex.org/keywords/ontology-alignment","display_name":"Ontology alignment","score":0.41995781660079956},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4122955799102783},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.41127920150756836},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3814920485019684},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.333329439163208},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.26664161682128906},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2527356743812561},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.24613463878631592},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.11589014530181885},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.06705203652381897}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8080911636352539},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7731482982635498},{"id":"https://openalex.org/C55439883","wikidata":"https://www.wikidata.org/wiki/Q360812","display_name":"Correctness","level":2,"score":0.7137048840522766},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.6856864094734192},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.6352188587188721},{"id":"https://openalex.org/C137003198","wikidata":"https://www.wikidata.org/wiki/Q7247296","display_name":"Process ontology","level":3,"score":0.5865887403488159},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5490952134132385},{"id":"https://openalex.org/C17231256","wikidata":"https://www.wikidata.org/wiki/Q5156540","display_name":"Completeness (order theory)","level":2,"score":0.5448662042617798},{"id":"https://openalex.org/C2778820784","wikidata":"https://www.wikidata.org/wiki/Q1027508","display_name":"Ontology engineering","level":4,"score":0.46952763199806213},{"id":"https://openalex.org/C78726541","wikidata":"https://www.wikidata.org/wiki/Q3882785","display_name":"Upper ontology","level":3,"score":0.45637309551239014},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.4556955397129059},{"id":"https://openalex.org/C45340560","wikidata":"https://www.wikidata.org/wiki/Q215382","display_name":"Disjoint sets","level":2,"score":0.4455999732017517},{"id":"https://openalex.org/C98893333","wikidata":"https://www.wikidata.org/wiki/Q4339878","display_name":"Ontology alignment","level":4,"score":0.41995781660079956},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4122955799102783},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.41127920150756836},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3814920485019684},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.333329439163208},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.26664161682128906},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2527356743812561},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.24613463878631592},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.11589014530181885},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.06705203652381897},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.4304/jcp.9.9.2151-2158","is_oa":false,"landing_page_url":"https://doi.org/10.4304/jcp.9.9.2151-2158","pdf_url":null,"source":{"id":"https://openalex.org/S77894049","display_name":"Journal of Computers","issn_l":"1796-203X","issn":["1796-203X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318660","host_organization_name":"Academy Publisher","host_organization_lineage":["https://openalex.org/P4310318660"],"host_organization_lineage_names":["Academy Publisher"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computers","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.4000000059604645,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W10083169","https://openalex.org/W50022627","https://openalex.org/W1038580120","https://openalex.org/W1521821114","https://openalex.org/W1527927437","https://openalex.org/W1537351552","https://openalex.org/W1849603791","https://openalex.org/W1971094449","https://openalex.org/W1981021538","https://openalex.org/W1985877031","https://openalex.org/W1993010157","https://openalex.org/W2018504982","https://openalex.org/W2047029075","https://openalex.org/W2057104411","https://openalex.org/W2063047597","https://openalex.org/W2109188334","https://openalex.org/W2159938093","https://openalex.org/W2168961710","https://openalex.org/W2243833967","https://openalex.org/W2303098424"],"related_works":["https://openalex.org/W2608149786","https://openalex.org/W2102229151","https://openalex.org/W2012420033","https://openalex.org/W2365397974","https://openalex.org/W152870918","https://openalex.org/W1794266373","https://openalex.org/W2396086199","https://openalex.org/W2732632690","https://openalex.org/W149627178","https://openalex.org/W4206428734"],"abstract_inverted_index":{"Now-a-days":[0],"the":[1,97,109,114,136,158,170],"challenge":[2],"that":[3,41],"is":[4,11,34,50,69,149],"increasingly":[5],"being":[6,70],"faced":[7],"in":[8,55],"different":[9,175],"domains":[10],"how":[12],"to":[13,35,108,127,150,156,169],"integrate":[14],"a":[15,24,73,89,93,139],"large":[16,94,140],"amount":[17,95],"of":[18,29,32,40,52,75,81,96,116,132,138,142,163],"available":[19,98,118],"data":[20,33,54,99,119],"and":[21,77,84,161],"information":[22],"for":[23,144,154],"particular":[25,42],"domain.":[26,43],"The":[27,124],"purpose":[28],"this":[30,45,117],"integration":[31,51,68],"get":[36,113],"an":[37,63],"easy":[38],"understanding":[39],"In":[44],"paper":[46],"our":[47],"main":[48],"focus":[49],"biological":[53],"single":[56],"ontology":[57,164],"which":[58],"will":[59],"be":[60],"developed":[61,173],"using":[62],"efficient":[64],"engineering":[65,165],"algorithm.":[66],"Data":[67],"provided":[71],"through":[72],"series":[74],"tools":[76],"techniques":[78],"but":[79],"lack":[80],"reliable":[82],"terminologies":[83],"concepts":[85],"cause":[86],"hurdles.":[87],"As":[88],"result,":[90],"on":[91],"internet":[92],"remains":[100],"detached":[101],"&":[102],"disjoint,":[103],"even":[104],"with":[105,129],"having":[106],"access":[107],"internet,":[110],"we":[111],"cannot":[112],"advantage":[115],"at":[120],"its":[121],"maximum":[122],"level.":[123],"dire":[125],"need":[126],"deal":[128],"such":[130],"type":[131],"issues":[133],"has":[134],"demanded":[135],"construction":[137],"number":[141],"ontologies":[143,172],"these":[145],"domains.":[146],"Our":[147],"goal":[148],"provide":[151],"new":[152],"technique":[153,166],"gene-ontology":[155],"increase":[157],"efficiency,":[159],"completeness":[160],"correctness":[162],"as":[167],"compared":[168],"previous":[171],"by":[174],"experts.":[176]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
