{"id":"https://openalex.org/W2033472734","doi":"https://doi.org/10.4304/jcp.8.3.613-621","title":"A Novel Ant Colony Optimization Based Algorithm for Identifying Gene Regulatory Elements","display_name":"A Novel Ant Colony Optimization Based Algorithm for Identifying Gene Regulatory Elements","publication_year":2013,"publication_date":"2013-02-27","ids":{"openalex":"https://openalex.org/W2033472734","doi":"https://doi.org/10.4304/jcp.8.3.613-621","mag":"2033472734"},"language":"en","primary_location":{"id":"doi:10.4304/jcp.8.3.613-621","is_oa":false,"landing_page_url":"https://doi.org/10.4304/jcp.8.3.613-621","pdf_url":null,"source":{"id":"https://openalex.org/S77894049","display_name":"Journal of Computers","issn_l":"1796-203X","issn":["1796-203X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318660","host_organization_name":"Academy Publisher","host_organization_lineage":["https://openalex.org/P4310318660"],"host_organization_lineage_names":["Academy Publisher"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computers","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100432002","display_name":"Wei Liu","orcid":"https://orcid.org/0000-0003-4507-7004"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wei Liu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011504932","display_name":"Hanwu Chen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hanwu Chen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069988750","display_name":"Ling Chen","orcid":"https://orcid.org/0000-0002-6468-5729"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ling Chen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5100393450","display_name":"Yixin Chen","orcid":"https://orcid.org/0000-0002-9591-634X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yixin Chen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.295,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.61226791,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"8","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10848","display_name":"Advanced Multi-Objective Optimization Algorithms","score":0.9794999957084656,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10100","display_name":"Metaheuristic Optimization Algorithms Research","score":0.9763000011444092,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ant-colony-optimization-algorithms","display_name":"Ant colony optimization algorithms","score":0.8436393737792969},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6248899102210999},{"id":"https://openalex.org/keywords/ant","display_name":"ANT","score":0.6121984720230103},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3937530815601349},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3675389289855957},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17846667766571045},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.06950962543487549}],"concepts":[{"id":"https://openalex.org/C40128228","wikidata":"https://www.wikidata.org/wiki/Q460851","display_name":"Ant colony optimization algorithms","level":2,"score":0.8436393737792969},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6248899102210999},{"id":"https://openalex.org/C97467695","wikidata":"https://www.wikidata.org/wiki/Q295802","display_name":"ANT","level":2,"score":0.6121984720230103},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3937530815601349},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3675389289855957},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17846667766571045},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.06950962543487549}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.4304/jcp.8.3.613-621","is_oa":false,"landing_page_url":"https://doi.org/10.4304/jcp.8.3.613-621","pdf_url":null,"source":{"id":"https://openalex.org/S77894049","display_name":"Journal of Computers","issn_l":"1796-203X","issn":["1796-203X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318660","host_organization_name":"Academy Publisher","host_organization_lineage":["https://openalex.org/P4310318660"],"host_organization_lineage_names":["Academy Publisher"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computers","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W1543801745","https://openalex.org/W1575445408","https://openalex.org/W1592870802","https://openalex.org/W1967195912","https://openalex.org/W1972564852","https://openalex.org/W1975009952","https://openalex.org/W1975924111","https://openalex.org/W1976949767","https://openalex.org/W2003967338","https://openalex.org/W2009659265","https://openalex.org/W2017200304","https://openalex.org/W2028904582","https://openalex.org/W2032231928","https://openalex.org/W2037940015","https://openalex.org/W2048869777","https://openalex.org/W2073850887","https://openalex.org/W2074764528","https://openalex.org/W2077013196","https://openalex.org/W2089783852","https://openalex.org/W2121356022","https://openalex.org/W2149769193","https://openalex.org/W2150271850","https://openalex.org/W2152255870","https://openalex.org/W2610493035","https://openalex.org/W4245023496","https://openalex.org/W4298215144","https://openalex.org/W6635200387","https://openalex.org/W6643386180","https://openalex.org/W6644589148","https://openalex.org/W6659963394","https://openalex.org/W6669145357","https://openalex.org/W6669238800","https://openalex.org/W6682557382"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2253992237","https://openalex.org/W624076816","https://openalex.org/W849430572","https://openalex.org/W2285878319","https://openalex.org/W594861393","https://openalex.org/W2991307080","https://openalex.org/W3177044606","https://openalex.org/W4237535716"],"abstract_inverted_index":{"It":[0],"is":[1],"one":[2],"of":[3,19,58,70,91],"the":[4,12,20,61,68,75],"most":[5],"important":[6],"tasks":[7],"in":[8,15],"bioinformatics":[9],"to":[10,29],"identify":[11],"regulatory":[13,25,51],"elements":[14,26],"gene":[16],"sequences.":[17],"\u00a0Most":[18],"current":[21],"algorithms":[22],"for":[23,49],"identifying":[24,50],"are":[27],"easily":[28],"converge":[30],"into":[31],"a":[32,43,78],"local":[33],"optimum,":[34],"and":[35],"have":[36],"high":[37,80],"time":[38,96],"complexity.":[39],"Therefore,":[40],"we":[41],"propose":[42],"novel":[44],"optimization":[45,56],"algorithm":[46,62],"named":[47],"ACRI(ant-colony-regulatory-identification)":[48],"elements.":[52],"Based":[53],"on":[54],"powerful":[55],"ability":[57],"ant-colony":[59],"algorithm,":[60],"ACRI":[63,86],"can":[64,87],"not":[65],"only":[66],"improve":[67],"quality":[69,90],"results,":[71],"but":[72],"also":[73],"solve":[74],"problem":[76],"at":[77],"very":[79],"speed.\u00a0":[81],"Experimental":[82],"results":[83],"show":[84],"that":[85],"obtain":[88],"higher":[89],"solutions":[92],"using":[93],"less":[94],"computational":[95],"than":[97],"other":[98],"traditional":[99],"algorithms.":[100]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}