{"id":"https://openalex.org/W1988102992","doi":"https://doi.org/10.4018/jnmc.2009010101","title":"Optimal DNA Codes for Computing and Self-Assembly","display_name":"Optimal DNA Codes for Computing and Self-Assembly","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1988102992","doi":"https://doi.org/10.4018/jnmc.2009010101","mag":"1988102992"},"language":"en","primary_location":{"id":"doi:10.4018/jnmc.2009010101","is_oa":false,"landing_page_url":"https://doi.org/10.4018/jnmc.2009010101","pdf_url":null,"source":{"id":"https://openalex.org/S4210204235","display_name":"International Journal of Nanotechnology and Molecular Computation","issn_l":"1941-6318","issn":["1941-6318","1941-6326"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320424","host_organization_name":"IGI Global","host_organization_lineage":["https://openalex.org/P4310320424"],"host_organization_lineage_names":["IGI Global"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Nanotechnology and Molecular Computation","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006855445","display_name":"Max Garz\u00f3n","orcid":"https://orcid.org/0000-0001-9552-2255"},"institutions":[{"id":"https://openalex.org/I94658018","display_name":"University of Memphis","ror":"https://ror.org/01cq23130","country_code":"US","type":"education","lineage":["https://openalex.org/I94658018"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Max H. Garzon","raw_affiliation_strings":["The University of Memphis, USA","The University of Memphis, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The University of Memphis, USA","institution_ids":["https://openalex.org/I94658018"]},{"raw_affiliation_string":"The University of Memphis, USA#TAB#","institution_ids":["https://openalex.org/I94658018"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019979430","display_name":"Vinhthuy Phan","orcid":"https://orcid.org/0000-0001-6108-1228"},"institutions":[{"id":"https://openalex.org/I94658018","display_name":"University of Memphis","ror":"https://ror.org/01cq23130","country_code":"US","type":"education","lineage":["https://openalex.org/I94658018"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vinhthuy Phan","raw_affiliation_strings":["The University of Memphis, USA","The University of Memphis, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The University of Memphis, USA","institution_ids":["https://openalex.org/I94658018"]},{"raw_affiliation_string":"The University of Memphis, USA#TAB#","institution_ids":["https://openalex.org/I94658018"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032100804","display_name":"Andrew J. Neel","orcid":"https://orcid.org/0000-0003-2872-5292"},"institutions":[{"id":"https://openalex.org/I94658018","display_name":"University of Memphis","ror":"https://ror.org/01cq23130","country_code":"US","type":"education","lineage":["https://openalex.org/I94658018"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Neel","raw_affiliation_strings":["The University of Memphis, USA","The University of Memphis, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The University of Memphis, USA","institution_ids":["https://openalex.org/I94658018"]},{"raw_affiliation_string":"The University of Memphis, USA#TAB#","institution_ids":["https://openalex.org/I94658018"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I94658018"],"apc_list":null,"apc_paid":null,"fwci":1.3501,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.79180249,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"1","issue":"1","first_page":"1","last_page":"17"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11393","display_name":"Biosensors and Analytical Detection","score":0.9772999882698059,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6510013341903687},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.6370382905006409},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.5118750333786011},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.47738760709762573},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4448334872722626},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.3043876886367798},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.12748774886131287},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.0945177674293518}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6510013341903687},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.6370382905006409},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.5118750333786011},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.47738760709762573},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4448334872722626},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.3043876886367798},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.12748774886131287},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0945177674293518}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.4018/jnmc.2009010101","is_oa":false,"landing_page_url":"https://doi.org/10.4018/jnmc.2009010101","pdf_url":null,"source":{"id":"https://openalex.org/S4210204235","display_name":"International Journal of Nanotechnology and Molecular Computation","issn_l":"1941-6318","issn":["1941-6318","1941-6326"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320424","host_organization_name":"IGI Global","host_organization_lineage":["https://openalex.org/P4310320424"],"host_organization_lineage_names":["IGI Global"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Nanotechnology and Molecular Computation","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:igg:jnmc00:v:1:y:2009:i:1:p:1-17","is_oa":false,"landing_page_url":"http://services.igi-global.com/resolvedoi/resolve.aspx?doi=10.4018/jnmc.2009010101","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W59861486","https://openalex.org/W202717924","https://openalex.org/W1498582737","https://openalex.org/W1541899307","https://openalex.org/W1557527473","https://openalex.org/W1567090568","https://openalex.org/W1592614241","https://openalex.org/W1608587956","https://openalex.org/W1966990985","https://openalex.org/W1970663985","https://openalex.org/W1977312644","https://openalex.org/W2003091620","https://openalex.org/W2010986587","https://openalex.org/W2014462280","https://openalex.org/W2017859062","https://openalex.org/W2018288292","https://openalex.org/W2031214412","https://openalex.org/W2039146500","https://openalex.org/W2047453575","https://openalex.org/W2074993099","https://openalex.org/W2106286650","https://openalex.org/W2134310806","https://openalex.org/W2135995702","https://openalex.org/W2170931604"],"related_works":["https://openalex.org/W2051487156","https://openalex.org/W2073681303","https://openalex.org/W2544423928","https://openalex.org/W2053286651","https://openalex.org/W2494523064","https://openalex.org/W2181743346","https://openalex.org/W1497573972","https://openalex.org/W2071659383","https://openalex.org/W1846253165","https://openalex.org/W2124122503"],"abstract_inverted_index":{"DNA":[0],"has":[1,51],"been":[2,52],"re-discovered":[3],"and":[4,25,102,119],"explored":[5,54],"in":[6,35,55],"the":[7,17,56,92,112],"last":[8,57],"decade":[9],"as":[10,46,89],"a":[11,67,108],"\u201csmart":[12],"glue\u201d":[13],"for":[14,48,114,135,141],"self-assembly":[15],"from":[16],"\u201cbottom-up\u201d":[18],"at":[19],"nanoscales":[20],"through":[21,60],"mesoscales":[22],"to":[23,44,71,76,117,128],"micro-":[24],"macro-scales.":[26],"These":[27],"applications":[28,50],"require":[29],"an":[30,73,143],"unprecedented":[31],"degree":[32],"of":[33,42,66,99,111,131,148],"precision":[34],"placing":[36],"atom-scale":[37],"components.":[38],"Finding":[39],"large":[40,78],"sets":[41,84,113],"probes":[43],"serve":[45],"anchors":[47],"such":[49],"thus":[53],"few":[58],"years":[59],"several":[61],"methods.":[62],"We":[63,105],"describe":[64],"results":[65],"tour":[68],"de":[69],"force":[70],"conduct":[72],"exhaustive":[74,144],"search":[75,145],"produce":[77,129],"codes":[79,130],"that":[80],"are":[81],"(nearly)":[82],"maximal":[83],"while":[85],"guaranteeing":[86],"high":[87,133],"quality,":[88],"measured":[90],"by":[91,138],"minimum":[93],"Gibbs":[94],"energy":[95],"between":[96],"any":[97],"pair":[98],"code":[100],"words,":[101],"other":[103],"criteria.":[104],"also":[106],"present":[107],"quantitative":[109],"characterization":[110],"sizes":[115],"up":[116],"20-mers":[118],"show":[120],"how":[121],"critical":[122],"building":[123],"blocks":[124],"can":[125],"be":[126],"extracted":[127],"very":[132],"quality":[134],"larger":[136],"lengths":[137],"probabilistic":[139],"combinations,":[140],"which":[142],"is":[146],"out":[147],"reach.":[149]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2026-06-11T06:19:23.411458","created_date":"2025-10-10T00:00:00"}
