{"id":"https://openalex.org/W2093196581","doi":"https://doi.org/10.4018/jkdb.2012040102","title":"Predicting Aging-Genes in Drosophila Melanogaster by Integrating Network Topological Features and Functional Categories","display_name":"Predicting Aging-Genes in Drosophila Melanogaster by Integrating Network Topological Features and Functional Categories","publication_year":2012,"publication_date":"2012-04-01","ids":{"openalex":"https://openalex.org/W2093196581","doi":"https://doi.org/10.4018/jkdb.2012040102","mag":"2093196581"},"language":"en","primary_location":{"id":"doi:10.4018/jkdb.2012040102","is_oa":false,"landing_page_url":"https://doi.org/10.4018/jkdb.2012040102","pdf_url":null,"source":{"id":"https://openalex.org/S113982356","display_name":"International Journal of Knowledge Discovery in Bioinformatics","issn_l":"1947-9115","issn":["1947-9115","1947-9123"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320424","host_organization_name":"IGI Global","host_organization_lineage":["https://openalex.org/P4310320424"],"host_organization_lineage_names":["IGI Global"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Knowledge Discovery in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100360587","display_name":"Yanhui Li","orcid":"https://orcid.org/0000-0001-7838-8277"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan-Hui Li","raw_affiliation_strings":["Institute of Cardiovascular Sciences and Key Laboratory of Molecular Cardiovascular Sciences, Ministry of Education, Peking University Health Science Center, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Cardiovascular Sciences and Key Laboratory of Molecular Cardiovascular Sciences, Ministry of Education, Peking University Health Science Center, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100372619","display_name":"Jianhui Li","orcid":"https://orcid.org/0009-0001-6253-9808"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian-Hui Li","raw_affiliation_strings":["Computer Network Information Center Chinese Academy of Sciences, Beijing, China","Computer Network Information, Center, Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Network Information Center Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210108629"]},{"raw_affiliation_string":"Computer Network Information, Center, Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210108629","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110532368","display_name":"Xin Song","orcid":"https://orcid.org/0000-0002-0193-7650"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Song","raw_affiliation_strings":["Computer Network Information Center Chinese Academy of Sciences, Beijing, China","Computer Network Information, Center, Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Network Information Center Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210108629"]},{"raw_affiliation_string":"Computer Network Information, Center, Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210108629","https://openalex.org/I19820366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071008365","display_name":"Kai Feng","orcid":"https://orcid.org/0000-0002-9954-570X"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kai Feng","raw_affiliation_strings":["Computer Network Information Center Chinese Academy of Sciences, Beijing, China","Computer Network Information, Center, Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Network Information Center Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210108629"]},{"raw_affiliation_string":"Computer Network Information, Center, Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210108629","https://openalex.org/I19820366"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065865669","display_name":"Yuanchun Zhou","orcid":"https://orcid.org/0000-0003-2144-1131"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuan-Chun Zhou","raw_affiliation_strings":["Computer Network Information Center Chinese Academy of Sciences, Beijing, China","Computer Network Information, Center, Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Network Information Center Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210108629"]},{"raw_affiliation_string":"Computer Network Information, Center, Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210108629","https://openalex.org/I19820366"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.11091199,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"3","issue":"2","first_page":"16","last_page":"26"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9789999723434448,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.7379558086395264},{"id":"https://openalex.org/keywords/drosophila-melanogaster","display_name":"Drosophila melanogaster","score":0.7199521660804749},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.523172914981842},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4617960453033447},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.44216105341911316},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4376561641693115},{"id":"https://openalex.org/keywords/drosophila","display_name":"Drosophila (subgenus)","score":0.4244599938392639},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3908819854259491},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3326558470726013},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.3316638469696045},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.0913034975528717}],"concepts":[{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.7379558086395264},{"id":"https://openalex.org/C2780104201","wikidata":"https://www.wikidata.org/wiki/Q130888","display_name":"Drosophila melanogaster","level":3,"score":0.7199521660804749},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.523172914981842},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4617960453033447},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.44216105341911316},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4376561641693115},{"id":"https://openalex.org/C2776041557","wikidata":"https://www.wikidata.org/wiki/Q3715451","display_name":"Drosophila (subgenus)","level":3,"score":0.4244599938392639},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3908819854259491},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3326558470726013},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.3316638469696045},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0913034975528717},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.4018/jkdb.2012040102","is_oa":false,"landing_page_url":"https://doi.org/10.4018/jkdb.2012040102","pdf_url":null,"source":{"id":"https://openalex.org/S113982356","display_name":"International Journal of Knowledge Discovery in Bioinformatics","issn_l":"1947-9115","issn":["1947-9115","1947-9123"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320424","host_organization_name":"IGI Global","host_organization_lineage":["https://openalex.org/P4310320424"],"host_organization_lineage_names":["IGI Global"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Knowledge Discovery in Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:igg:jkdb00:v:3:y:2012:i:2:p:16-26","is_oa":false,"landing_page_url":"http://services.igi-global.com/resolvedoi/resolve.aspx?doi=10.4018/jkdb.2012040102","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.550000011920929,"id":"https://metadata.un.org/sdg/8","display_name":"Decent work and economic growth"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W229097380","https://openalex.org/W1584308190","https://openalex.org/W1907835050","https://openalex.org/W1983728054","https://openalex.org/W1994166779","https://openalex.org/W2000515947","https://openalex.org/W2017587511","https://openalex.org/W2021025020","https://openalex.org/W2051147455","https://openalex.org/W2056595894","https://openalex.org/W2069832267","https://openalex.org/W2082202339","https://openalex.org/W2083045667","https://openalex.org/W2086595847","https://openalex.org/W2091686779","https://openalex.org/W2103017472","https://openalex.org/W2112947018","https://openalex.org/W2118957830","https://openalex.org/W2119664173","https://openalex.org/W2133219389","https://openalex.org/W2133990480","https://openalex.org/W2137464714","https://openalex.org/W2142411278","https://openalex.org/W2152360905","https://openalex.org/W2152705149","https://openalex.org/W2153280946","https://openalex.org/W2153635508","https://openalex.org/W2163485494","https://openalex.org/W3120421331","https://openalex.org/W4205687621"],"related_works":["https://openalex.org/W4323037479","https://openalex.org/W4311607074","https://openalex.org/W3025486376","https://openalex.org/W3166827729","https://openalex.org/W2236776555","https://openalex.org/W2753303236","https://openalex.org/W2082613811","https://openalex.org/W162000807","https://openalex.org/W2353646577","https://openalex.org/W2795702742"],"abstract_inverted_index":{"An":[0],"important":[1],"task":[2],"of":[3,15,42],"aging":[4,16,28,48,64,79,101,114,121],"research":[5],"is":[6,18],"to":[7,26,82,99],"find":[8],"genes":[9,17,29,49,55,65,80,102,122],"that":[10,63],"regulate":[11],"lifespan.":[12],"Wet-lab":[13],"identification":[14],"tedious":[19],"and":[20,61],"labor-intensive":[21],"activity.":[22],"Developing":[23],"an":[24,95],"algorithm":[25,96],"predict":[27],"will":[30],"be":[31,83,133],"greatly":[32],"helpful.":[33],"In":[34],"this":[35],"paper,":[36],"we":[37],"systematically":[38],"analyzed":[39],"topological":[40,71],"features":[41,72],"proteins":[43],"encoded":[44,52],"by":[45,53,68,125],"Drosophila":[46],"melanogaster":[47],"versus":[50],"those":[51],"non-aging":[54],"in":[56,76,85,113],"protein-protein":[57],"interaction":[58],"(PPI)":[59],"network":[60,70],"found":[62],"are":[66],"characterized":[67],"several":[69],"such":[73],"as":[74],"higher":[75],"degrees.":[77],"And":[78],"tend":[81],"enriched":[84],"certain":[86],"functions":[87],"were":[88,123],"also":[89],"found.":[90,134],"Based":[91],"on":[92],"these":[93],"features,":[94],"was":[97],"developed":[98],"detect":[100],"genome":[103],"wide.":[104],"With":[105],"a":[106],"posterior":[107],"probability":[108],"score":[109],"describing":[110],"possible":[111],"involvement":[112],"no":[115],"less":[116],"than":[117],"1,":[118],"1014":[119],"novel":[120],"predicted":[124],"decision":[126],"trees.":[127],"Evidence":[128],"supporting":[129],"our":[130],"prediction":[131],"can":[132]},"counts_by_year":[],"updated_date":"2026-06-11T06:19:23.411458","created_date":"2025-10-10T00:00:00"}
