{"id":"https://openalex.org/W2161609807","doi":"https://doi.org/10.4018/jkdb.2010070104","title":"Identification of Distinguishing Motifs","display_name":"Identification of Distinguishing Motifs","publication_year":2010,"publication_date":"2010-07-01","ids":{"openalex":"https://openalex.org/W2161609807","doi":"https://doi.org/10.4018/jkdb.2010070104","mag":"2161609807"},"language":"en","primary_location":{"id":"doi:10.4018/jkdb.2010070104","is_oa":false,"landing_page_url":"https://doi.org/10.4018/jkdb.2010070104","pdf_url":null,"source":{"id":"https://openalex.org/S113982356","display_name":"International Journal of Knowledge Discovery in Bioinformatics","issn_l":"1947-9115","issn":["1947-9115","1947-9123"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320424","host_organization_name":"IGI Global","host_organization_lineage":["https://openalex.org/P4310320424"],"host_organization_lineage_names":["IGI Global"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Knowledge Discovery in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5058501124","display_name":"Wangsen Feng","orcid":null},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Wangsen Feng","raw_affiliation_strings":["Peking University, China"],"affiliations":[{"raw_affiliation_string":"Peking University, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065315257","display_name":"Lusheng Wang","orcid":"https://orcid.org/0000-0002-4344-8791"},"institutions":[{"id":"https://openalex.org/I168719708","display_name":"City University of Hong Kong","ror":"https://ror.org/03q8dnn23","country_code":"HK","type":"education","lineage":["https://openalex.org/I168719708"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Lusheng Wang","raw_affiliation_strings":["City University of Hong Kong, China"],"affiliations":[{"raw_affiliation_string":"City University of Hong Kong, China","institution_ids":["https://openalex.org/I168719708"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5058501124"],"corresponding_institution_ids":["https://openalex.org/I20231570"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14986237,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"1","issue":"3","first_page":"53","last_page":"67"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/indel","display_name":"Indel","score":0.8011670112609863},{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.7434238195419312},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5729813575744629},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.490092396736145},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.47431182861328125},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.413847953081131},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.376829594373703},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34961774945259094},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.33984366059303284},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21803313493728638},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2157585620880127}],"concepts":[{"id":"https://openalex.org/C119054055","wikidata":"https://www.wikidata.org/wiki/Q1576681","display_name":"Indel","level":5,"score":0.8011670112609863},{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.7434238195419312},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5729813575744629},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.490092396736145},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.47431182861328125},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.413847953081131},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.376829594373703},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34961774945259094},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.33984366059303284},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21803313493728638},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2157585620880127},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.0},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.4018/jkdb.2010070104","is_oa":false,"landing_page_url":"https://doi.org/10.4018/jkdb.2010070104","pdf_url":null,"source":{"id":"https://openalex.org/S113982356","display_name":"International Journal of Knowledge Discovery in Bioinformatics","issn_l":"1947-9115","issn":["1947-9115","1947-9123"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320424","host_organization_name":"IGI Global","host_organization_lineage":["https://openalex.org/P4310320424"],"host_organization_lineage_names":["IGI Global"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Knowledge Discovery in Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:RePEc:igg:jkdb00:v:1:y:2010:i:3:p:53-67","is_oa":false,"landing_page_url":"http://services.igi-global.com/resolvedoi/resolve.aspx?doi=10.4018/jkdb.2010070104","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8399999737739563,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W938539187","https://openalex.org/W1518026427","https://openalex.org/W1580213736","https://openalex.org/W1592870802","https://openalex.org/W1964502706","https://openalex.org/W1964541472","https://openalex.org/W1973754133","https://openalex.org/W1990169993","https://openalex.org/W1991579867","https://openalex.org/W2028904582","https://openalex.org/W2029345527","https://openalex.org/W2047386086","https://openalex.org/W2048869777","https://openalex.org/W2053743126","https://openalex.org/W2056002855","https://openalex.org/W2070310544","https://openalex.org/W2085239230","https://openalex.org/W2092006839","https://openalex.org/W2098519113","https://openalex.org/W2099316694","https://openalex.org/W2106304690","https://openalex.org/W2117168988","https://openalex.org/W2159129072","https://openalex.org/W2171614937","https://openalex.org/W2327125052","https://openalex.org/W4229588480"],"related_works":["https://openalex.org/W2033001683","https://openalex.org/W2167094946","https://openalex.org/W4387460329","https://openalex.org/W2046457574","https://openalex.org/W1949458596","https://openalex.org/W3144677376","https://openalex.org/W32785519","https://openalex.org/W4382398022","https://openalex.org/W2160515792","https://openalex.org/W2164863064"],"abstract_inverted_index":{"Motif":[0],"identification":[1],"for":[2,88,106],"DNA":[3],"sequences":[4,45],"has":[5],"many":[6],"important":[7],"applications":[8],"in":[9,42,73,97],"biological":[10],"studies,":[11],"including":[12],"diagnostic":[13],"probe":[14],"design,":[15],"locating":[16],"binding":[17],"sites":[18],"and":[19,22,33,71],"regulatory":[20],"signals,":[21],"potential":[23],"drug":[24],"target":[25],"identification.":[26],"There":[27],"are":[28],"two":[29,108],"versions\u2014the":[30],"Single":[31],"Group":[32],"Two":[34],"Groups.":[35],"Here,":[36],"the":[37,40,43,56,64,74,77,82,89,98,101,107],"occurrences":[38,75,99],"of":[39,50,58,63,76,100],"motif":[41],"given":[44,112],"have":[46],"errors.":[47],"Currently,":[48],"most":[49,62],"existing":[51],"programs":[52,65],"can":[53,94],"only":[54],"handle":[55,95],"case":[57],"single":[59],"group.":[60],"However,":[61],"do":[66],"not":[67],"allow":[68],"indels":[69,96],"(insertions":[70],"deletions)":[72],"motif.":[78,102],"In":[79],"this":[80],"paper,":[81],"authors":[83],"propose":[84],"a":[85],"randomized":[86],"algorithm":[87,105],"one":[90],"group":[91],"problem":[92,110],"that":[93],"Finally,":[103],"an":[104],"groups\u2019":[109],"is":[111],"along":[113],"with":[114],"extensive":[115],"simulations":[116],"evaluating":[117],"algorithms.":[118]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}