{"id":"https://openalex.org/W2897867762","doi":"https://doi.org/10.4018/jitr.2019010109","title":"The Research on the Osmotic Stress Gene Mining Model Based on the Arabidopsis Genome","display_name":"The Research on the Osmotic Stress Gene Mining Model Based on the Arabidopsis Genome","publication_year":2018,"publication_date":"2018-10-08","ids":{"openalex":"https://openalex.org/W2897867762","doi":"https://doi.org/10.4018/jitr.2019010109","mag":"2897867762"},"language":"en","primary_location":{"id":"doi:10.4018/jitr.2019010109","is_oa":false,"landing_page_url":"https://doi.org/10.4018/jitr.2019010109","pdf_url":null,"source":{"id":"https://openalex.org/S138592535","display_name":"Journal of Information Technology Research","issn_l":"1938-7857","issn":["1938-7857","1938-7865"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320424","host_organization_name":"IGI Global","host_organization_lineage":["https://openalex.org/P4310320424"],"host_organization_lineage_names":["IGI Global"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Information Technology Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022636146","display_name":"Xiao Yu","orcid":"https://orcid.org/0000-0003-2491-9110"},"institutions":[{"id":"https://openalex.org/I169572211","display_name":"Northeast Agricultural University","ror":"https://ror.org/0515nd386","country_code":"CN","type":"education","lineage":["https://openalex.org/I169572211"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiao Yu","raw_affiliation_strings":["College of Electrical and Information, Northeast Agricultural University, Harbin, China"],"affiliations":[{"raw_affiliation_string":"College of Electrical and Information, Northeast Agricultural University, Harbin, China","institution_ids":["https://openalex.org/I169572211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100331019","display_name":"Xiang Li","orcid":"https://orcid.org/0000-0001-8944-086X"},"institutions":[{"id":"https://openalex.org/I169572211","display_name":"Northeast Agricultural University","ror":"https://ror.org/0515nd386","country_code":"CN","type":"education","lineage":["https://openalex.org/I169572211"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiang Li","raw_affiliation_strings":["College of Electrical and Information, Northeast Agricultural University, Harbin, China"],"affiliations":[{"raw_affiliation_string":"College of Electrical and Information, Northeast Agricultural University, Harbin, China","institution_ids":["https://openalex.org/I169572211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033591992","display_name":"Huihui Deng","orcid":null},"institutions":[{"id":"https://openalex.org/I169572211","display_name":"Northeast Agricultural University","ror":"https://ror.org/0515nd386","country_code":"CN","type":"education","lineage":["https://openalex.org/I169572211"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huihui Deng","raw_affiliation_strings":["College of Electrical and Information, Northeast Agricultural University, Harbin, China"],"affiliations":[{"raw_affiliation_string":"College of Electrical and Information, Northeast Agricultural University, Harbin, China","institution_ids":["https://openalex.org/I169572211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080271346","display_name":"Yuchen Tang","orcid":"https://orcid.org/0000-0002-1632-4339"},"institutions":[{"id":"https://openalex.org/I169572211","display_name":"Northeast Agricultural University","ror":"https://ror.org/0515nd386","country_code":"CN","type":"education","lineage":["https://openalex.org/I169572211"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuchen Tang","raw_affiliation_strings":["College of Electrical and Information, Northeast Agricultural University, Harbin, China"],"affiliations":[{"raw_affiliation_string":"College of Electrical and Information, Northeast Agricultural University, Harbin, China","institution_ids":["https://openalex.org/I169572211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079344922","display_name":"Zhepeng Hou","orcid":null},"institutions":[{"id":"https://openalex.org/I169572211","display_name":"Northeast Agricultural University","ror":"https://ror.org/0515nd386","country_code":"CN","type":"education","lineage":["https://openalex.org/I169572211"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhepeng Hou","raw_affiliation_strings":["College of Electrical and Information, Northeast Agricultural University, Harbin, China"],"affiliations":[{"raw_affiliation_string":"College of Electrical and Information, Northeast Agricultural University, Harbin, China","institution_ids":["https://openalex.org/I169572211"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073652551","display_name":"Qingming Kong","orcid":"https://orcid.org/0000-0003-3894-5352"},"institutions":[{"id":"https://openalex.org/I169572211","display_name":"Northeast Agricultural University","ror":"https://ror.org/0515nd386","country_code":"CN","type":"education","lineage":["https://openalex.org/I169572211"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qingming Kong","raw_affiliation_strings":["College of Electrical and Information, Northeast Agricultural University, Harbin, China"],"affiliations":[{"raw_affiliation_string":"College of Electrical and Information, Northeast Agricultural University, Harbin, China","institution_ids":["https://openalex.org/I169572211"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5022636146"],"corresponding_institution_ids":["https://openalex.org/I169572211"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.06427077,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"12","issue":"1","first_page":"117","last_page":"132"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9800000190734863,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9800000190734863,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10303","display_name":"Photosynthetic Processes and Mechanisms","score":0.9789000153541565,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9749000072479248,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.7057020664215088},{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.6440681219100952},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5496037602424622},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5301471948623657},{"id":"https://openalex.org/keywords/osmotic-shock","display_name":"Osmotic shock","score":0.5243775248527527},{"id":"https://openalex.org/keywords/genbank","display_name":"GenBank","score":0.5061721205711365},{"id":"https://openalex.org/keywords/arabidopsis-thaliana","display_name":"Arabidopsis thaliana","score":0.5005073547363281},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.49434614181518555},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.45900389552116394},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.43910062313079834},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.34373101592063904},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.29971611499786377},{"id":"https://openalex.org/keywords/mutant","display_name":"Mutant","score":0.09638559818267822}],"concepts":[{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.7057020664215088},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.6440681219100952},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5496037602424622},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5301471948623657},{"id":"https://openalex.org/C168529131","wikidata":"https://www.wikidata.org/wiki/Q13656562","display_name":"Osmotic shock","level":3,"score":0.5243775248527527},{"id":"https://openalex.org/C79029880","wikidata":"https://www.wikidata.org/wiki/Q901755","display_name":"GenBank","level":3,"score":0.5061721205711365},{"id":"https://openalex.org/C2775988993","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Arabidopsis thaliana","level":4,"score":0.5005073547363281},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.49434614181518555},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45900389552116394},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.43910062313079834},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.34373101592063904},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.29971611499786377},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.09638559818267822}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.4018/jitr.2019010109","is_oa":false,"landing_page_url":"https://doi.org/10.4018/jitr.2019010109","pdf_url":null,"source":{"id":"https://openalex.org/S138592535","display_name":"Journal of Information Technology Research","issn_l":"1938-7857","issn":["1938-7857","1938-7865"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320424","host_organization_name":"IGI Global","host_organization_lineage":["https://openalex.org/P4310320424"],"host_organization_lineage_names":["IGI Global"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Information Technology Research","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W1967656072","https://openalex.org/W1969658622","https://openalex.org/W1992888081","https://openalex.org/W2010012568","https://openalex.org/W2014956626","https://openalex.org/W2020094760","https://openalex.org/W2026222098","https://openalex.org/W2026896156","https://openalex.org/W2036648920","https://openalex.org/W2045583971","https://openalex.org/W2054861920","https://openalex.org/W2067660931","https://openalex.org/W2104864984","https://openalex.org/W2105874120","https://openalex.org/W2109645877","https://openalex.org/W2132768093","https://openalex.org/W2166898290","https://openalex.org/W2170302056","https://openalex.org/W2283441735","https://openalex.org/W2316928500","https://openalex.org/W2348870596","https://openalex.org/W2353145309","https://openalex.org/W2387929757","https://openalex.org/W2388459809","https://openalex.org/W2427890794","https://openalex.org/W3005855406","https://openalex.org/W3088253681","https://openalex.org/W3168725649"],"related_works":["https://openalex.org/W1594012662","https://openalex.org/W2106134872","https://openalex.org/W2269421989","https://openalex.org/W3147624048","https://openalex.org/W2006745274","https://openalex.org/W2355042192","https://openalex.org/W2391996571","https://openalex.org/W2372627703","https://openalex.org/W2004827304","https://openalex.org/W3143095410"],"abstract_inverted_index":{"In":[0,77],"the":[1,4,24,31,42,51,62,66,70,86,90,94,101,114,121,124,157,162,166,188,192,197,201,218,224,247,263,269,274,279,311,314,319,322,330,337],"field":[2],"of":[3,26,34,50,53,116,131,174,199,226,249,273,281,285,346],"bioinformatics,":[5],"during":[6],"osmotic":[7,125,146,221,230],"stress":[8,147,222],"response":[9],"genes":[10],"mining":[11,255],"processing,":[12],"it":[13],"is":[14,37,73,134,148,276],"also":[15,170],"very":[16],"crucial":[17],"to":[18,64,109,119,210,291,299,329],"verify":[19],"experimental":[20,43,128,167],"data":[21,129,189,265],"obtained":[22,190],"in":[23,191,196,318],"course":[25,198],"complex":[27],"experiments":[28],"by":[29,229],"using":[30,61,93],"computer.":[32],"Aim":[33],"this":[35,212],"paper":[36],"taking":[38,48],"Arabidopsis":[39,163],"thaliana":[40],"as":[41,165,184,217],"crop,":[44],"designing":[45,58],"technology":[46],"roadmap,":[47],"advantage":[49],"skills":[52],"function":[54],"and":[55,75,92,111,140,152,235,244,259,344],"programming,":[56],"then":[57],"algorithms.":[59],"After":[60],"program":[63],"predict":[65],"transcription":[67],"start":[68],"point,":[69],"promoter":[71,87,164,219],"sequence":[72,88,142],"extracted":[74],"simplified.":[76],"addition,":[78],"different":[79],"alignment":[80],"methods":[81],"are":[82],"classified.":[83],"Then,":[84],"comparing":[85],"with":[89,145,278,327],"cis-element":[91,141],"formula":[95],"for":[96,262],"further":[97,107],"processing.":[98],"Finally,":[99],"get":[100],"probability":[102,117],"P":[103,207],"value,":[104],"which":[105,195],"provide":[106],"help":[108],"experts":[110],"scholars":[112],"on":[113],"basis":[115],"values":[118],"determine":[120],"correlation":[122],"between":[123],"stress.":[126,231],"The":[127],"source":[130],"chromosomal":[132],"sequences":[133],"received":[135],"from":[136,150,289,297],"Genbank":[137],"database":[138],"files,":[139],"that":[143],"associated":[144],"collected":[149],"TRANSFAC":[151],"TRRD":[153],"database.":[154],"From":[155],"this,":[156],"authors":[158,315],"not":[159],"only":[160],"used":[161,252,303,325],"data,":[168],"but":[169],"use":[171,248],"a":[172,185],"variety":[173],"eukaryotic":[175],"promoters":[176,178],"include":[177],"GhNHX1":[179],"rice,":[180,236],"cotton":[181,234],"OsNHX1":[182],"promoter,":[183],"comparison.":[186],"Wherein":[187],"biological":[193],"laboratory,":[194],"running":[200,238,271],"program,":[202],"70%":[203],"have":[204,266],"been":[205,267],"verified.":[206],"value":[208],"close":[209],"0.8,":[211],"article":[213],"will":[214],"be":[215],"treated":[216],"contains":[220],"cis-elements,":[223],"expression":[225],"gene":[227,254],"induced":[228],"For":[232],"thaliana,":[233],"programs":[237],"average":[239,270],"time":[240,272,284],"was":[241],"51s,":[242],"72s":[243],"114s.":[245],"Through":[246],"some":[250],"commonly":[251],"bioinformatics":[253],"algorithms,":[256,321],"MEME":[257,286],"algorithm":[258,261,287,295,324],"BioProspector":[260,294],"same":[264,312],"processed,":[268],"system":[275],"increasing":[277],"increase":[280],"data.":[282],"Running":[283],"increases":[288,296],"60s":[290],"reach":[292],"198s,":[293],"45s":[298],"150s":[300],"model":[301,323],"process":[302],"herein":[304,326],"were":[305],"50s,":[306],"75s,":[307],"110s,":[308],"135s.":[309],"At":[310],"time,":[313],"can":[316],"see":[317],"three":[320],"respect":[328],"first":[331],"two":[332],"more":[333],"optimized.":[334],"To":[335],"ensure":[336],"accuracy":[338],"rate,":[339],"meanwhile":[340],"has":[341],"high":[342],"speed":[343],"stabilization":[345],"higher.":[347]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
