{"id":"https://openalex.org/W1993928884","doi":"https://doi.org/10.4018/ijkdb.2012100104","title":"Predicting Protein Functions from Protein Interaction Networks","display_name":"Predicting Protein Functions from Protein Interaction Networks","publication_year":2012,"publication_date":"2012-10-01","ids":{"openalex":"https://openalex.org/W1993928884","doi":"https://doi.org/10.4018/ijkdb.2012100104","mag":"1993928884"},"language":"en","primary_location":{"id":"doi:10.4018/ijkdb.2012100104","is_oa":false,"landing_page_url":"https://doi.org/10.4018/ijkdb.2012100104","pdf_url":null,"source":{"id":"https://openalex.org/S113982356","display_name":"International Journal of Knowledge Discovery in Bioinformatics","issn_l":"1947-9115","issn":["1947-9115","1947-9123"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320424","host_organization_name":"IGI Global","host_organization_lineage":["https://openalex.org/P4310320424"],"host_organization_lineage_names":["IGI Global"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Knowledge Discovery in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056590153","display_name":"Hon Nian Chua","orcid":null},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Hon Nian Chua","raw_affiliation_strings":["Institute for Infocomm Research, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012381970","display_name":"Limsoon Wong","orcid":"https://orcid.org/0000-0003-1241-5441"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Limsoon Wong","raw_affiliation_strings":["National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.1918,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.76961642,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"3","issue":"4","first_page":"50","last_page":"70"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-function","display_name":"Protein function","score":0.7463040351867676},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6588784456253052},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.6544712781906128},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.6359021067619324},{"id":"https://openalex.org/keywords/protein-function-prediction","display_name":"Protein function prediction","score":0.6061323881149292},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.4868306517601013},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4033607244491577},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3928944766521454},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3765217065811157},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21257475018501282},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10852351784706116},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.06247636675834656}],"concepts":[{"id":"https://openalex.org/C2986374874","wikidata":"https://www.wikidata.org/wiki/Q8054","display_name":"Protein function","level":3,"score":0.7463040351867676},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6588784456253052},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.6544712781906128},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.6359021067619324},{"id":"https://openalex.org/C207060522","wikidata":"https://www.wikidata.org/wiki/Q7251473","display_name":"Protein function prediction","level":4,"score":0.6061323881149292},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.4868306517601013},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4033607244491577},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3928944766521454},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3765217065811157},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21257475018501282},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10852351784706116},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.06247636675834656},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.4018/ijkdb.2012100104","is_oa":false,"landing_page_url":"https://doi.org/10.4018/ijkdb.2012100104","pdf_url":null,"source":{"id":"https://openalex.org/S113982356","display_name":"International Journal of Knowledge Discovery in Bioinformatics","issn_l":"1947-9115","issn":["1947-9115","1947-9123"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320424","host_organization_name":"IGI Global","host_organization_lineage":["https://openalex.org/P4310320424"],"host_organization_lineage_names":["IGI Global"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Knowledge Discovery in Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.150.8139","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.150.8139","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.comp.nus.edu.sg/~wongls/psZ/kennybk-nov08.pdf","raw_type":"text"},{"id":"pmh:oai:RePEc:igg:jkdb00:v:3:y:2012:i:4:p:50-70","is_oa":false,"landing_page_url":"http://services.igi-global.com/resolvedoi/resolve.aspx?doi=10.4018/ijkdb.2012100104","pdf_url":null,"source":{"id":"https://openalex.org/S4306401271","display_name":"RePEc: Research Papers in Economics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I77793887","host_organization_name":"Federal Reserve Bank of St. Louis","host_organization_lineage":["https://openalex.org/I77793887"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":104,"referenced_works":["https://openalex.org/W1486817521","https://openalex.org/W1507028917","https://openalex.org/W1511160855","https://openalex.org/W1518994209","https://openalex.org/W1544089433","https://openalex.org/W1559908473","https://openalex.org/W1956694423","https://openalex.org/W1966690718","https://openalex.org/W1995117714","https://openalex.org/W1996835973","https://openalex.org/W1997063559","https://openalex.org/W1999154602","https://openalex.org/W2000844908","https://openalex.org/W2001457899","https://openalex.org/W2006124679","https://openalex.org/W2011986160","https://openalex.org/W2013502943","https://openalex.org/W2015292449","https://openalex.org/W2020999234","https://openalex.org/W2024060531","https://openalex.org/W2025853251","https://openalex.org/W2030928641","https://openalex.org/W2032319966","https://openalex.org/W2042210880","https://openalex.org/W2045131140","https://openalex.org/W2051795211","https://openalex.org/W2052688256","https://openalex.org/W2055043387","https://openalex.org/W2057885377","https://openalex.org/W2064820767","https://openalex.org/W2066632835","https://openalex.org/W2076620247","https://openalex.org/W2078071124","https://openalex.org/W2080182143","https://openalex.org/W2082367094","https://openalex.org/W2083654996","https://openalex.org/W2088534163","https://openalex.org/W2090766471","https://openalex.org/W2095803950","https://openalex.org/W2097282516","https://openalex.org/W2097542211","https://openalex.org/W2098201363","https://openalex.org/W2098926562","https://openalex.org/W2100494857","https://openalex.org/W2101220662","https://openalex.org/W2103017472","https://openalex.org/W2103453943","https://openalex.org/W2104080300","https://openalex.org/W2106882534","https://openalex.org/W2107424557","https://openalex.org/W2107710781","https://openalex.org/W2107717979","https://openalex.org/W2109715166","https://openalex.org/W2110041134","https://openalex.org/W2110863368","https://openalex.org/W2112791119","https://openalex.org/W2113654464","https://openalex.org/W2118957335","https://openalex.org/W2119043225","https://openalex.org/W2121507105","https://openalex.org/W2123854512","https://openalex.org/W2127385662","https://openalex.org/W2130479394","https://openalex.org/W2130956021","https://openalex.org/W2131456688","https://openalex.org/W2133923320","https://openalex.org/W2136850043","https://openalex.org/W2138312771","https://openalex.org/W2141885858","https://openalex.org/W2142237411","https://openalex.org/W2144344817","https://openalex.org/W2144810924","https://openalex.org/W2146264532","https://openalex.org/W2146312020","https://openalex.org/W2148603752","https://openalex.org/W2148853951","https://openalex.org/W2150926065","https://openalex.org/W2151875636","https://openalex.org/W2152539566","https://openalex.org/W2158714788","https://openalex.org/W2160764161","https://openalex.org/W2160875291","https://openalex.org/W2161062388","https://openalex.org/W2161732286","https://openalex.org/W2162891889","https://openalex.org/W2163105490","https://openalex.org/W2163736554","https://openalex.org/W2165495989","https://openalex.org/W2167318540","https://openalex.org/W2170652857","https://openalex.org/W2170666908","https://openalex.org/W2171403830","https://openalex.org/W2171430493","https://openalex.org/W2171692650","https://openalex.org/W2172049947","https://openalex.org/W2915868289","https://openalex.org/W3199143553","https://openalex.org/W4210323379","https://openalex.org/W4234647679","https://openalex.org/W4242290123","https://openalex.org/W4245145908","https://openalex.org/W4252706339","https://openalex.org/W4320996280","https://openalex.org/W7071374342"],"related_works":["https://openalex.org/W2094822546","https://openalex.org/W4388708026","https://openalex.org/W1969080446","https://openalex.org/W4255644844","https://openalex.org/W3108941781","https://openalex.org/W2181394498","https://openalex.org/W2287132924","https://openalex.org/W2131407941","https://openalex.org/W2125650596","https://openalex.org/W2586268529"],"abstract_inverted_index":{"Functional":[0],"characterization":[1],"of":[2,22,43],"genes":[3],"and":[4,12,95,102],"their":[5,92,100],"protein":[6,45,55,87],"products":[7],"is":[8,17],"essential":[9],"to":[10,26,40],"biological":[11],"clinical":[13],"research.":[14],"Yet,":[15],"there":[16],"still":[18],"no":[19],"reliable":[20],"way":[21],"assigning":[23],"functional":[24],"annotations":[25],"proteins":[27],"in":[28,61],"a":[29,77],"high-throughput":[30],"manner.":[31],"In":[32,73],"this":[33,62],"article,":[34],"the":[35,41,51,58],"authors":[36],"provide":[37],"an":[38],"introduction":[39],"task":[42],"automated":[44,54],"function":[46,56,88],"prediction.":[47],"They":[48],"discuss":[49],"about":[50],"motivation":[52],"for":[53,86],"prediction,":[57,89],"challenges":[59],"faced":[60],"task,":[63],"as":[64,66,97,99],"well":[65,98],"some":[67],"approaches":[68],"that":[69,82],"are":[70],"currently":[71],"available.":[72],"particular,":[74],"they":[75],"take":[76],"closer":[78],"look":[79],"at":[80],"methods":[81],"use":[83],"protein-protein":[84],"interaction":[85],"elaborating":[90],"on":[91],"underlying":[93],"techniques":[94],"assumptions,":[96],"strengths":[101],"limitations.":[103]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":2}],"updated_date":"2026-06-11T06:19:23.411458","created_date":"2025-10-10T00:00:00"}
