{"id":"https://openalex.org/W2956648750","doi":"https://doi.org/10.3906/elk-1909-31","title":"A new hybrid genetic algorithm for protein structure prediction on the 2D triangular lattice","display_name":"A new hybrid genetic algorithm for protein structure prediction on the 2D triangular lattice","publication_year":2020,"publication_date":"2020-09-20","ids":{"openalex":"https://openalex.org/W2956648750","doi":"https://doi.org/10.3906/elk-1909-31","mag":"2956648750"},"language":"en","primary_location":{"id":"doi:10.3906/elk-1909-31","is_oa":true,"landing_page_url":"https://doi.org/10.3906/elk-1909-31","pdf_url":"https://doi.org/10.3906/elk-1909-31","source":{"id":"https://openalex.org/S32837994","display_name":"TURKISH JOURNAL OF ELECTRICAL ENGINEERING & COMPUTER SCIENCES","issn_l":"1300-0632","issn":["1300-0632","1303-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310318422","host_organization_name":"Scientific and Technological Research Council of Turkey (TUBITAK)","host_organization_lineage":["https://openalex.org/P4310318422"],"host_organization_lineage_names":["Scientific and Technological Research Council of Turkey (TUBITAK)"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"TURKISH JOURNAL OF ELECTRICAL ENGINEERING &amp; COMPUTER SCIENCES","raw_type":"journal-article"},"type":"preprint","indexed_in":["arxiv","crossref","datacite","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://doi.org/10.3906/elk-1909-31","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Nabil BOUMEDINE","orcid":"https://orcid.org/0000-0002-0691-6189"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Nabil BOUMEDINE","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-0691-6189","affiliations":[]},{"author_position":"last","author":{"id":null,"display_name":"Sadek BOUROUBI","orcid":"https://orcid.org/0000-0002-1466-310X"},"institutions":[{"id":"https://openalex.org/I118692353","display_name":"University of Science and Technology","ror":"https://ror.org/05bj7sh33","country_code":"YE","type":"education","lineage":["https://openalex.org/I118692353"]},{"id":"https://openalex.org/I157169809","display_name":"University of Sciences and Technology Houari Boumediene","ror":"https://ror.org/02kb89c09","country_code":"DZ","type":"education","lineage":["https://openalex.org/I157169809"]}],"countries":["DZ","YE"],"is_corresponding":false,"raw_author_name":"Sadek BOUROUBI","raw_affiliation_strings":["University of Science and Technology Houari Boumediene#TAB#"],"raw_orcid":"https://orcid.org/0000-0002-1466-310X","affiliations":[{"raw_affiliation_string":"University of Science and Technology Houari Boumediene#TAB#","institution_ids":["https://openalex.org/I157169809","https://openalex.org/I118692353"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0834,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.42398562,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"29","issue":"2","first_page":"499","last_page":"513"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9702000021934509,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tabu-search","display_name":"Tabu search","score":0.779927134513855},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.6387417316436768},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.6081187129020691},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.601448655128479},{"id":"https://openalex.org/keywords/genetic-algorithm","display_name":"Genetic algorithm","score":0.594730794429779},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5103215575218201},{"id":"https://openalex.org/keywords/lattice","display_name":"Lattice (music)","score":0.45787379145622253},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.4137188792228699},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.3988266587257385},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.27928897738456726},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.268558531999588},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24327921867370605}],"concepts":[{"id":"https://openalex.org/C123370116","wikidata":"https://www.wikidata.org/wiki/Q1424540","display_name":"Tabu search","level":2,"score":0.779927134513855},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.6387417316436768},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.6081187129020691},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.601448655128479},{"id":"https://openalex.org/C8880873","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.594730794429779},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5103215575218201},{"id":"https://openalex.org/C2781204021","wikidata":"https://www.wikidata.org/wiki/Q6497091","display_name":"Lattice (music)","level":2,"score":0.45787379145622253},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.4137188792228699},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.3988266587257385},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.27928897738456726},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.268558531999588},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24327921867370605},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C46141821","wikidata":"https://www.wikidata.org/wiki/Q209402","display_name":"Nuclear magnetic resonance","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3906/elk-1909-31","is_oa":true,"landing_page_url":"https://doi.org/10.3906/elk-1909-31","pdf_url":"https://doi.org/10.3906/elk-1909-31","source":{"id":"https://openalex.org/S32837994","display_name":"TURKISH JOURNAL OF ELECTRICAL ENGINEERING & COMPUTER SCIENCES","issn_l":"1300-0632","issn":["1300-0632","1303-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310318422","host_organization_name":"Scientific and Technological Research Council of Turkey (TUBITAK)","host_organization_lineage":["https://openalex.org/P4310318422"],"host_organization_lineage_names":["Scientific and Technological Research Council of Turkey (TUBITAK)"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"TURKISH JOURNAL OF ELECTRICAL ENGINEERING &amp; COMPUTER SCIENCES","raw_type":"journal-article"},{"id":"pmh:oai:arXiv.org:1907.04190","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1907.04190","pdf_url":"https://arxiv.org/pdf/1907.04190","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"mag:2956648750","is_oa":true,"landing_page_url":"https://arxiv.org/pdf/1907.04190","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.1907.04190","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.1907.04190","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.3906/elk-1909-31","is_oa":true,"landing_page_url":"https://doi.org/10.3906/elk-1909-31","pdf_url":"https://doi.org/10.3906/elk-1909-31","source":{"id":"https://openalex.org/S32837994","display_name":"TURKISH JOURNAL OF ELECTRICAL ENGINEERING & COMPUTER SCIENCES","issn_l":"1300-0632","issn":["1300-0632","1303-6203"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310318422","host_organization_name":"Scientific and Technological Research Council of Turkey (TUBITAK)","host_organization_lineage":["https://openalex.org/P4310318422"],"host_organization_lineage_names":["Scientific and Technological Research Council of Turkey (TUBITAK)"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"TURKISH JOURNAL OF ELECTRICAL ENGINEERING &amp; COMPUTER SCIENCES","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W1481729573","https://openalex.org/W1489848052","https://openalex.org/W1509531050","https://openalex.org/W1529397453","https://openalex.org/W1564001275","https://openalex.org/W1582766542","https://openalex.org/W1592391206","https://openalex.org/W1613273921","https://openalex.org/W1640378004","https://openalex.org/W1984527736","https://openalex.org/W2002616263","https://openalex.org/W2026980998","https://openalex.org/W2037691968","https://openalex.org/W2039568841","https://openalex.org/W2042398195","https://openalex.org/W2058141315","https://openalex.org/W2080382112","https://openalex.org/W2092292464","https://openalex.org/W2094661877","https://openalex.org/W2100356383","https://openalex.org/W2101206889","https://openalex.org/W2129526759","https://openalex.org/W2130660179","https://openalex.org/W2212750383","https://openalex.org/W2885533875"],"related_works":["https://openalex.org/W2273504876","https://openalex.org/W2208598352","https://openalex.org/W1971138856","https://openalex.org/W1807017408","https://openalex.org/W2089673159","https://openalex.org/W3023174333","https://openalex.org/W3187018953","https://openalex.org/W2077035426","https://openalex.org/W2070200001","https://openalex.org/W3103664618","https://openalex.org/W16088600","https://openalex.org/W2084782013","https://openalex.org/W2090048942","https://openalex.org/W1955456092","https://openalex.org/W2786167761","https://openalex.org/W2768967915","https://openalex.org/W3170002551","https://openalex.org/W1950855768","https://openalex.org/W2904444054","https://openalex.org/W2206705059"],"abstract_inverted_index":{"The":[0],"flawless":[1],"functioning":[2],"of":[3,17,91,104,125],"a":[4,18,27,43,62,123],"protein":[5,19],"is":[6,26,97],"essentially":[7],"linked":[8],"to":[9,83],"its":[10,22],"own":[11],"three-dimensional":[12],"structure.":[13],"Therefore,":[14],"the":[15,54,85,89,102,105,109,116],"prediction":[16],"structure":[20],"from":[21],"amino":[23],"acid":[24],"sequence":[25],"fundamental":[28],"problem":[29,38,46],"in":[30,81],"many":[31],"fields":[32],"that":[33],"draws":[34],"researchers":[35],"attention.":[36],"This":[37],"can":[39],"be":[40],"formulated":[41],"as":[42,53,108],"combinatorial":[44],"optimization":[45],"based":[47],"on":[48],"simplified":[49],"lattice":[50],"models":[51],"such":[52],"hydrophobic-polar":[55],"model.":[56],"In":[57],"this":[58],"paper,":[59],"we":[60,100,114],"propose":[61],"new":[63],"hybrid":[64],"algorithm":[65,80,118],"combining":[66],"three":[67],"different":[68],"well-known":[69],"heuristic":[70],"algorithms:":[71],"genetic":[72],"algorithm,":[73,93],"tabu":[74],"search":[75,79],"strategy":[76],"and":[77],"local":[78],"order":[82],"solve":[84],"PSP":[86],"problem.":[87],"Regarding":[88],"assessment":[90],"suggested":[92,117],"an":[94],"experimental":[95],"study":[96],"included,":[98],"where":[99],"considered":[101],"quality":[103,111],"produced":[106],"solution":[107],"main":[110],"criterion.":[112],"Furthermore,":[113],"compared":[115],"with":[119],"state-of-the-art":[120],"algorithms":[121],"using":[122],"selection":[124],"well-studied":[126],"benchmark":[127],"instances.":[128]},"counts_by_year":[{"year":2020,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
