{"id":"https://openalex.org/W4407585267","doi":"https://doi.org/10.3390/a18020105","title":"Advancing Taxonomy with Machine Learning: A Hybrid Ensemble for Species and Genus Classification","display_name":"Advancing Taxonomy with Machine Learning: A Hybrid Ensemble for Species and Genus Classification","publication_year":2025,"publication_date":"2025-02-14","ids":{"openalex":"https://openalex.org/W4407585267","doi":"https://doi.org/10.3390/a18020105"},"language":"en","primary_location":{"id":"doi:10.3390/a18020105","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a18020105","pdf_url":"https://www.mdpi.com/1999-4893/18/2/105/pdf?version=1739524095","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1999-4893/18/2/105/pdf?version=1739524095","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007729428","display_name":"Loris Nanni","orcid":"https://orcid.org/0000-0002-3502-7209"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Loris Nanni","raw_affiliation_strings":["Department of Information Engineering, University of Padova, Via Giovanni Gradenigo, 6b, 35131 Padova, Italy"],"raw_orcid":"https://orcid.org/0000-0002-3502-7209","affiliations":[{"raw_affiliation_string":"Department of Information Engineering, University of Padova, Via Giovanni Gradenigo, 6b, 35131 Padova, Italy","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Matteo De Gobbi","orcid":null},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Matteo De Gobbi","raw_affiliation_strings":["Department of Information Engineering, University of Padova, Via Giovanni Gradenigo, 6b, 35131 Padova, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Engineering, University of Padova, Via Giovanni Gradenigo, 6b, 35131 Padova, Italy","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101476505","display_name":"Roger De Almeida Matos","orcid":"https://orcid.org/0000-0003-1751-2603"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Roger De Almeida Matos Junior","raw_affiliation_strings":["Department of Information Engineering, University of Padova, Via Giovanni Gradenigo, 6b, 35131 Padova, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Engineering, University of Padova, Via Giovanni Gradenigo, 6b, 35131 Padova, Italy","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051258355","display_name":"Daniel Fusaro","orcid":"https://orcid.org/0009-0000-4053-5577"},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Daniel Fusaro","raw_affiliation_strings":["Department of Information Engineering, University of Padova, Via Giovanni Gradenigo, 6b, 35131 Padova, Italy"],"raw_orcid":"https://orcid.org/0009-0000-4053-5577","affiliations":[{"raw_affiliation_string":"Department of Information Engineering, University of Padova, Via Giovanni Gradenigo, 6b, 35131 Padova, Italy","institution_ids":["https://openalex.org/I138689650"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5007729428"],"corresponding_institution_ids":["https://openalex.org/I138689650"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":0.6802,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.66159986,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":95},"biblio":{"volume":"18","issue":"2","first_page":"105","last_page":"105"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12388","display_name":"Identification and Quantification in Food","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12388","display_name":"Identification and Quantification in Food","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.9631999731063843,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9491999745368958,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/taxonomy","display_name":"Taxonomy (biology)","score":0.7883353233337402},{"id":"https://openalex.org/keywords/ensemble-learning","display_name":"Ensemble learning","score":0.684159517288208},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5305678844451904},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.517326831817627},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.43587082624435425},{"id":"https://openalex.org/keywords/zoology","display_name":"Zoology","score":0.26793086528778076},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2527206838130951}],"concepts":[{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.7883353233337402},{"id":"https://openalex.org/C45942800","wikidata":"https://www.wikidata.org/wiki/Q245652","display_name":"Ensemble learning","level":2,"score":0.684159517288208},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5305678844451904},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.517326831817627},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.43587082624435425},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.26793086528778076},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2527206838130951}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3390/a18020105","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a18020105","pdf_url":"https://www.mdpi.com/1999-4893/18/2/105/pdf?version=1739524095","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:4e62451ee978449aa1b75a3dadc32a8c","is_oa":true,"landing_page_url":"https://doaj.org/article/4e62451ee978449aa1b75a3dadc32a8c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms, Vol 18, Iss 2, p 105 (2025)","raw_type":"article"},{"id":"pmh:oai:www.research.unipd.it:11577/3548420","is_oa":true,"landing_page_url":"https://hdl.handle.net/11577/3548420","pdf_url":null,"source":{"id":"https://openalex.org/S4306402547","display_name":"Padua Research Archive (University of Padova)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138689650","host_organization_name":"University of Padua","host_organization_lineage":["https://openalex.org/I138689650"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.3390/a18020105","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a18020105","pdf_url":"https://www.mdpi.com/1999-4893/18/2/105/pdf?version=1739524095","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320309480","display_name":"Nvidia","ror":"https://ror.org/03jdj4y14"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4407585267.pdf","grobid_xml":"https://content.openalex.org/works/W4407585267.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W2062633146","https://openalex.org/W2099901798","https://openalex.org/W2108598243","https://openalex.org/W2126208160","https://openalex.org/W2145836476","https://openalex.org/W2194775991","https://openalex.org/W2759820149","https://openalex.org/W2785678896","https://openalex.org/W2919681993","https://openalex.org/W2959883904","https://openalex.org/W2966002724","https://openalex.org/W2982381843","https://openalex.org/W2988297868","https://openalex.org/W2997849610","https://openalex.org/W3003811256","https://openalex.org/W3005374239","https://openalex.org/W3008278163","https://openalex.org/W3042182083","https://openalex.org/W3121953277","https://openalex.org/W3130176955","https://openalex.org/W3169935126","https://openalex.org/W3197054356","https://openalex.org/W3201083518","https://openalex.org/W3201819732","https://openalex.org/W3211515984","https://openalex.org/W3215820471","https://openalex.org/W4200067878","https://openalex.org/W4283123615","https://openalex.org/W4311058533","https://openalex.org/W4313591142","https://openalex.org/W4320016024","https://openalex.org/W4366547873","https://openalex.org/W4367153869","https://openalex.org/W4385976136","https://openalex.org/W4389108535","https://openalex.org/W4396913382","https://openalex.org/W4402164413","https://openalex.org/W4402876605","https://openalex.org/W4404609500","https://openalex.org/W4407607521","https://openalex.org/W6798859159","https://openalex.org/W6803574934","https://openalex.org/W6852258785"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W4387369504","https://openalex.org/W3046775127","https://openalex.org/W4394896187","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W3107602296","https://openalex.org/W4364306694","https://openalex.org/W4312192474"],"abstract_inverted_index":{"Traditionally,":[0],"classifying":[1],"species":[2,52,69],"has":[3],"required":[4],"taxonomic":[5],"experts":[6],"to":[7,28,50],"carefully":[8],"examine":[9],"unique":[10],"physical":[11],"characteristics,":[12],"a":[13,21,77,165],"time-intensive":[14],"and":[15,34,43,53,97,149,159],"complex":[16],"process.":[17],"Machine":[18],"learning":[19],"offers":[20],"promising":[22],"alternative":[23],"by":[24,94],"utilizing":[25],"computational":[26],"power":[27],"detect":[29],"subtle":[30],"distinctions":[31],"more":[32],"quickly":[33],"accurately.":[35],"This":[36],"technology":[37],"can":[38],"classify":[39],"both":[40,157],"known":[41,48],"(described)":[42],"unknown":[44,55,68],"(undescribed)":[45],"species,":[46,161],"assigning":[47],"samples":[49],"specific":[51],"grouping":[54],"ones":[56],"at":[57],"the":[58,63,104,120,154],"genus":[59],"level\u2014an":[60],"improvement":[61],"over":[62],"common":[64],"practice":[65],"of":[66,106,122,156],"labeling":[67],"as":[70,141],"outliers.":[71],"In":[72],"this":[73,162],"paper,":[74],"we":[75],"propose":[76],"novel":[78],"ensemble":[79],"approach":[80],"that":[81,127],"integrates":[82],"neural":[83,124],"networks":[84,125],"with":[85],"support":[86],"vector":[87,108],"machines":[88],"(SVM).":[89],"Each":[90],"animal":[91,147],"is":[92],"represented":[93],"an":[95],"image":[96,133],"its":[98],"DNA":[99,150],"barcode.":[100],"Our":[101,135],"research":[102,163],"investigates":[103],"transformation":[105],"one-dimensional":[107],"data":[109],"into":[110],"two-dimensional":[111],"three-channel":[112],"matrices":[113],"using":[114],"discrete":[115],"wavelet":[116],"transform":[117],"(DWT),":[118],"enabling":[119,153],"application":[121],"convolutional":[123],"(CNNs)":[126],"have":[128],"been":[129],"pre-trained":[130],"on":[131,143],"large":[132],"datasets.":[134],"method":[136],"significantly":[137],"outperforms":[138],"existing":[139],"approaches,":[140],"demonstrated":[142],"several":[144],"datasets":[145],"containing":[146],"images":[148],"barcodes.":[151],"By":[152],"classification":[155],"described":[158],"undescribed":[160],"represents":[164],"major":[166],"step":[167],"forward":[168],"in":[169],"global":[170],"biodiversity":[171],"monitoring.":[172]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
