{"id":"https://openalex.org/W4404122561","doi":"https://doi.org/10.3390/a17110511","title":"PIPET: A Pipeline to Generate PET Phantom Datasets for Reconstruction Based on Convolutional Neural Network Training","display_name":"PIPET: A Pipeline to Generate PET Phantom Datasets for Reconstruction Based on Convolutional Neural Network Training","publication_year":2024,"publication_date":"2024-11-07","ids":{"openalex":"https://openalex.org/W4404122561","doi":"https://doi.org/10.3390/a17110511"},"language":"en","primary_location":{"id":"doi:10.3390/a17110511","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a17110511","pdf_url":"https://www.mdpi.com/1999-4893/17/11/511/pdf?version=1730958309","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1999-4893/17/11/511/pdf?version=1730958309","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5114547815","display_name":"Alejandro Sanz-Sanchez","orcid":"https://orcid.org/0009-0001-9595-8865"},"institutions":[{"id":"https://openalex.org/I4210135990","display_name":"Instituto de Instrumentaci\u00f3n para Imagen Molecular","ror":"https://ror.org/03p80e845","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210135990","https://openalex.org/I60053951"]},{"id":"https://openalex.org/I60053951","display_name":"Universitat Polit\u00e8cnica de Val\u00e8ncia","ror":"https://ror.org/01460j859","country_code":"ES","type":"education","lineage":["https://openalex.org/I60053951"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Alejandro Sanz-Sanchez","raw_affiliation_strings":["Instituto de Instrumentaci\u00f3n Para Imagen Molecular (I3M), Universitat Polit\u00e8cnica de Val\u00e8ncia (UPV), Cam\u00ed de Vera s/n, 46022 Val\u00e8ncia, Spain"],"affiliations":[{"raw_affiliation_string":"Instituto de Instrumentaci\u00f3n Para Imagen Molecular (I3M), Universitat Polit\u00e8cnica de Val\u00e8ncia (UPV), Cam\u00ed de Vera s/n, 46022 Val\u00e8ncia, Spain","institution_ids":["https://openalex.org/I4210135990","https://openalex.org/I60053951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075948291","display_name":"Francisco Javier Alba Garc\u00eda","orcid":"https://orcid.org/0000-0001-6569-0864"},"institutions":[{"id":"https://openalex.org/I4210135990","display_name":"Instituto de Instrumentaci\u00f3n para Imagen Molecular","ror":"https://ror.org/03p80e845","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210135990","https://openalex.org/I60053951"]},{"id":"https://openalex.org/I60053951","display_name":"Universitat Polit\u00e8cnica de Val\u00e8ncia","ror":"https://ror.org/01460j859","country_code":"ES","type":"education","lineage":["https://openalex.org/I60053951"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Francisco B. Garc\u00eda","raw_affiliation_strings":["Instituto de Instrumentaci\u00f3n Para Imagen Molecular (I3M), Universitat Polit\u00e8cnica de Val\u00e8ncia (UPV), Cam\u00ed de Vera s/n, 46022 Val\u00e8ncia, Spain"],"affiliations":[{"raw_affiliation_string":"Instituto de Instrumentaci\u00f3n Para Imagen Molecular (I3M), Universitat Polit\u00e8cnica de Val\u00e8ncia (UPV), Cam\u00ed de Vera s/n, 46022 Val\u00e8ncia, Spain","institution_ids":["https://openalex.org/I4210135990","https://openalex.org/I60053951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114547816","display_name":"Pablo Mesas-Lafarga","orcid":"https://orcid.org/0000-0002-6207-9004"},"institutions":[{"id":"https://openalex.org/I4210135990","display_name":"Instituto de Instrumentaci\u00f3n para Imagen Molecular","ror":"https://ror.org/03p80e845","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210135990","https://openalex.org/I60053951"]},{"id":"https://openalex.org/I60053951","display_name":"Universitat Polit\u00e8cnica de Val\u00e8ncia","ror":"https://ror.org/01460j859","country_code":"ES","type":"education","lineage":["https://openalex.org/I60053951"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Pablo Mesas-Lafarga","raw_affiliation_strings":["Instituto de Instrumentaci\u00f3n Para Imagen Molecular (I3M), Universitat Polit\u00e8cnica de Val\u00e8ncia (UPV), Cam\u00ed de Vera s/n, 46022 Val\u00e8ncia, Spain"],"affiliations":[{"raw_affiliation_string":"Instituto de Instrumentaci\u00f3n Para Imagen Molecular (I3M), Universitat Polit\u00e8cnica de Val\u00e8ncia (UPV), Cam\u00ed de Vera s/n, 46022 Val\u00e8ncia, Spain","institution_ids":["https://openalex.org/I4210135990","https://openalex.org/I60053951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089346758","display_name":"Joan Prats-Climent","orcid":"https://orcid.org/0000-0002-9775-4671"},"institutions":[{"id":"https://openalex.org/I4210135990","display_name":"Instituto de Instrumentaci\u00f3n para Imagen Molecular","ror":"https://ror.org/03p80e845","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210135990","https://openalex.org/I60053951"]},{"id":"https://openalex.org/I60053951","display_name":"Universitat Polit\u00e8cnica de Val\u00e8ncia","ror":"https://ror.org/01460j859","country_code":"ES","type":"education","lineage":["https://openalex.org/I60053951"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Joan Prats-Climent","raw_affiliation_strings":["Instituto de Instrumentaci\u00f3n Para Imagen Molecular (I3M), Universitat Polit\u00e8cnica de Val\u00e8ncia (UPV), Cam\u00ed de Vera s/n, 46022 Val\u00e8ncia, Spain"],"affiliations":[{"raw_affiliation_string":"Instituto de Instrumentaci\u00f3n Para Imagen Molecular (I3M), Universitat Polit\u00e8cnica de Val\u00e8ncia (UPV), Cam\u00ed de Vera s/n, 46022 Val\u00e8ncia, Spain","institution_ids":["https://openalex.org/I4210135990","https://openalex.org/I60053951"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019946648","display_name":"Mar\u00eda Jos\u00e9 Rodr\u00edguez-\u00c1lvarez","orcid":"https://orcid.org/0000-0001-8333-8792"},"institutions":[{"id":"https://openalex.org/I4210135990","display_name":"Instituto de Instrumentaci\u00f3n para Imagen Molecular","ror":"https://ror.org/03p80e845","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210135990","https://openalex.org/I60053951"]},{"id":"https://openalex.org/I60053951","display_name":"Universitat Polit\u00e8cnica de Val\u00e8ncia","ror":"https://ror.org/01460j859","country_code":"ES","type":"education","lineage":["https://openalex.org/I60053951"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Mar\u00eda Jos\u00e9 Rodr\u00edguez-\u00c1lvarez","raw_affiliation_strings":["Instituto de Instrumentaci\u00f3n Para Imagen Molecular (I3M), Universitat Polit\u00e8cnica de Val\u00e8ncia (UPV), Cam\u00ed de Vera s/n, 46022 Val\u00e8ncia, Spain"],"affiliations":[{"raw_affiliation_string":"Instituto de Instrumentaci\u00f3n Para Imagen Molecular (I3M), Universitat Polit\u00e8cnica de Val\u00e8ncia (UPV), Cam\u00ed de Vera s/n, 46022 Val\u00e8ncia, Spain","institution_ids":["https://openalex.org/I4210135990","https://openalex.org/I60053951"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5114547815"],"corresponding_institution_ids":["https://openalex.org/I4210135990","https://openalex.org/I60053951"],"apc_list":{"value":1400,"currency":"CHF","value_usd":1515},"apc_paid":{"value":1400,"currency":"CHF","value_usd":1515},"fwci":0.3919,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.66579564,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":98},"biblio":{"volume":"17","issue":"11","first_page":"511","last_page":"511"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12386","display_name":"Advanced X-ray and CT Imaging","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10358","display_name":"Advanced Radiotherapy Techniques","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/3108","display_name":"Radiation"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/imaging-phantom","display_name":"Imaging phantom","score":0.8397697806358337},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.8121429681777954},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.7931926250457764},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7482264041900635},{"id":"https://openalex.org/keywords/training","display_name":"Training (meteorology)","score":0.648607611656189},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6012575030326843},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.513505756855011},{"id":"https://openalex.org/keywords/training-set","display_name":"Training set","score":0.4617917537689209},{"id":"https://openalex.org/keywords/pipette","display_name":"Pipette","score":0.4442002773284912},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.41475000977516174},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3948240280151367},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.35895830392837524},{"id":"https://openalex.org/keywords/nuclear-medicine","display_name":"Nuclear medicine","score":0.09756934642791748},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.0789349377155304},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.06980562210083008}],"concepts":[{"id":"https://openalex.org/C104293457","wikidata":"https://www.wikidata.org/wiki/Q28324852","display_name":"Imaging phantom","level":2,"score":0.8397697806358337},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.8121429681777954},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7931926250457764},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7482264041900635},{"id":"https://openalex.org/C2777211547","wikidata":"https://www.wikidata.org/wiki/Q17141490","display_name":"Training (meteorology)","level":2,"score":0.648607611656189},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6012575030326843},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.513505756855011},{"id":"https://openalex.org/C51632099","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Training set","level":2,"score":0.4617917537689209},{"id":"https://openalex.org/C151552171","wikidata":"https://www.wikidata.org/wiki/Q163373","display_name":"Pipette","level":2,"score":0.4442002773284912},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.41475000977516174},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3948240280151367},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.35895830392837524},{"id":"https://openalex.org/C2989005","wikidata":"https://www.wikidata.org/wiki/Q214963","display_name":"Nuclear medicine","level":1,"score":0.09756934642791748},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0789349377155304},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.06980562210083008},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C147789679","wikidata":"https://www.wikidata.org/wiki/Q11372","display_name":"Physical chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C153294291","wikidata":"https://www.wikidata.org/wiki/Q25261","display_name":"Meteorology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3390/a17110511","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a17110511","pdf_url":"https://www.mdpi.com/1999-4893/17/11/511/pdf?version=1730958309","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},{"id":"pmh:oai:digital.csic.es:10261/389649","is_oa":true,"landing_page_url":"http://hdl.handle.net/10261/389649","pdf_url":"https://digital.csic.es/bitstream/10261/389649/1/pipet_gate_Sanz.pdf","source":{"id":"https://openalex.org/S4306401639","display_name":"DIGITAL.CSIC (Spanish National Research Council (CSIC))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134820265","host_organization_name":"Consejo Superior de Investigaciones Cient\u00edficas","host_organization_lineage":["https://openalex.org/I134820265"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:riunet.upv.es:10251/212870","is_oa":true,"landing_page_url":"http://hdl.handle.net/10251/212870","pdf_url":"https://riunet.upv.es/bitstreams/3c407c35-517f-44cc-a07e-10417d98668f/download","source":{"id":"https://openalex.org/S4306401500","display_name":"RiuNet (Politechnical University of Valencia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I60053951","host_organization_name":"Universitat Polit\u00e8cnica de Val\u00e8ncia","host_organization_lineage":["https://openalex.org/I60053951"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:65f1031c9be24381af864e2697996ef2","is_oa":true,"landing_page_url":"https://doaj.org/article/65f1031c9be24381af864e2697996ef2","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms, Vol 17, Iss 11, p 511 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.3390/a17110511","is_oa":true,"landing_page_url":"https://doi.org/10.3390/a17110511","pdf_url":"https://www.mdpi.com/1999-4893/17/11/511/pdf?version=1730958309","source":{"id":"https://openalex.org/S190629608","display_name":"Algorithms","issn_l":"1999-4893","issn":["1999-4893"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.4099999964237213,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4404122561.pdf","grobid_xml":"https://content.openalex.org/works/W4404122561.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1647554959","https://openalex.org/W1976903066","https://openalex.org/W2010478558","https://openalex.org/W2051203581","https://openalex.org/W2083927153","https://openalex.org/W2138884296","https://openalex.org/W2139518045","https://openalex.org/W2149603455","https://openalex.org/W2154744699","https://openalex.org/W2341683925","https://openalex.org/W2798538010","https://openalex.org/W2885633224","https://openalex.org/W3008292561","https://openalex.org/W3020372009","https://openalex.org/W3109871773","https://openalex.org/W3167570948","https://openalex.org/W4224252209","https://openalex.org/W4293105839","https://openalex.org/W4296276645","https://openalex.org/W4297808737","https://openalex.org/W4396793478","https://openalex.org/W6636952455","https://openalex.org/W6825688687"],"related_works":["https://openalex.org/W2527888227","https://openalex.org/W2335837029","https://openalex.org/W2043403464","https://openalex.org/W2236318108","https://openalex.org/W2333119910","https://openalex.org/W2358667400","https://openalex.org/W2018853599","https://openalex.org/W2008073618","https://openalex.org/W2157569674","https://openalex.org/W1992197332"],"abstract_inverted_index":{"There":[0],"has":[1],"been":[2],"a":[3,49,64],"strong":[4],"interest":[5],"in":[6,14,87],"using":[7,25],"neural":[8,26,128],"networks":[9,27,129],"to":[10,36,42,77,125],"solve":[11],"several":[12,81],"tasks":[13],"PET":[15,58,65,102,131],"medical":[16],"imaging.":[17],"One":[18],"of":[19,34,55,63,83,91,99,106,112],"the":[20,29,38,53,61,69,72,88,92,97],"main":[21],"problems":[22],"faced":[23],"when":[24],"is":[28],"quality,":[30],"quantity,":[31],"and":[32,67,104,114],"availability":[33],"data":[35,117],"train":[37,126],"algorithms.":[39],"In":[40,75],"order":[41,76],"address":[43],"this":[44,120],"issue,":[45],"we":[46],"have":[47],"developed":[48],"pipeline":[50,95,121],"that":[51],"enables":[52],"generation":[54],"voxelized":[56],"synthetic":[57],"phantoms,":[59],"simulates":[60],"acquisition":[62],"scan,":[66],"reconstructs":[68],"image":[70],"from":[71,119],"simulated":[73],"data.":[74],"achieve":[78],"these":[79],"results,":[80],"pieces":[82],"software":[84],"are":[85],"used":[86,124],"different":[89,110],"steps":[90],"pipeline.":[93],"This":[94],"solves":[96],"problem":[98],"generating":[100],"diverse":[101],"datasets":[103],"images":[105],"high":[107],"quality":[108],"for":[109,130],"types":[111],"phantoms":[113],"configurations.":[115],"The":[116],"obtained":[118],"can":[122],"be":[123],"convolutional":[127],"reconstruction.":[132]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-04-15T08:11:43.952461","created_date":"2025-10-10T00:00:00"}
