{"id":"https://openalex.org/W3110968550","doi":"https://doi.org/10.3390/sym12122090","title":"Genetic Similarity Analysis Based on Positive and Negative Sequence Patterns of DNA","display_name":"Genetic Similarity Analysis Based on Positive and Negative Sequence Patterns of DNA","publication_year":2020,"publication_date":"2020-12-16","ids":{"openalex":"https://openalex.org/W3110968550","doi":"https://doi.org/10.3390/sym12122090","mag":"3110968550"},"language":"en","primary_location":{"id":"doi:10.3390/sym12122090","is_oa":true,"landing_page_url":"https://doi.org/10.3390/sym12122090","pdf_url":"https://www.mdpi.com/2073-8994/12/12/2090/pdf?version=1608111381","source":{"id":"https://openalex.org/S190787756","display_name":"Symmetry","issn_l":"2073-8994","issn":["2073-8994"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Symmetry","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2073-8994/12/12/2090/pdf?version=1608111381","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056464018","display_name":"Yue Lu","orcid":"https://orcid.org/0000-0001-7483-4436"},"institutions":[{"id":"https://openalex.org/I152269853","display_name":"Qilu University of Technology","ror":"https://ror.org/04hyzq608","country_code":"CN","type":"education","lineage":["https://openalex.org/I152269853"]},{"id":"https://openalex.org/I4210142748","display_name":"Shandong Academy of Sciences","ror":"https://ror.org/04y8d6y55","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210142748"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yue Lu","raw_affiliation_strings":["School of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China","institution_ids":["https://openalex.org/I152269853","https://openalex.org/I4210142748"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101624670","display_name":"Long Zhao","orcid":"https://orcid.org/0000-0001-5375-8462"},"institutions":[{"id":"https://openalex.org/I152269853","display_name":"Qilu University of Technology","ror":"https://ror.org/04hyzq608","country_code":"CN","type":"education","lineage":["https://openalex.org/I152269853"]},{"id":"https://openalex.org/I4210142748","display_name":"Shandong Academy of Sciences","ror":"https://ror.org/04y8d6y55","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210142748"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Long Zhao","raw_affiliation_strings":["School of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China","institution_ids":["https://openalex.org/I152269853","https://openalex.org/I4210142748"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100617903","display_name":"Zhao Li","orcid":"https://orcid.org/0000-0001-7524-1624"},"institutions":[{"id":"https://openalex.org/I152269853","display_name":"Qilu University of Technology","ror":"https://ror.org/04hyzq608","country_code":"CN","type":"education","lineage":["https://openalex.org/I152269853"]},{"id":"https://openalex.org/I4210142748","display_name":"Shandong Academy of Sciences","ror":"https://ror.org/04y8d6y55","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210142748"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhao Li","raw_affiliation_strings":["Shandong Computer Science Center (National Supercomputer Center in Jinan), Shandong Provincial Key Laboratory of Computer Networks, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250014, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shandong Computer Science Center (National Supercomputer Center in Jinan), Shandong Provincial Key Laboratory of Computer Networks, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250014, China","institution_ids":["https://openalex.org/I152269853","https://openalex.org/I4210142748"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100748278","display_name":"Xiangjun Dong","orcid":"https://orcid.org/0000-0002-5364-5844"},"institutions":[{"id":"https://openalex.org/I152269853","display_name":"Qilu University of Technology","ror":"https://ror.org/04hyzq608","country_code":"CN","type":"education","lineage":["https://openalex.org/I152269853"]},{"id":"https://openalex.org/I4210142748","display_name":"Shandong Academy of Sciences","ror":"https://ror.org/04y8d6y55","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210142748"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiangjun Dong","raw_affiliation_strings":["School of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China"],"raw_orcid":"https://orcid.org/0000-0002-5364-5844","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250353, China","institution_ids":["https://openalex.org/I152269853","https://openalex.org/I4210142748"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5100748278","https://openalex.org/A5101624670"],"corresponding_institution_ids":["https://openalex.org/I152269853","https://openalex.org/I4210142748"],"apc_list":{"value":2000,"currency":"CHF","value_usd":2227},"apc_paid":{"value":2000,"currency":"CHF","value_usd":2227},"fwci":0.0746,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.41556176,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"12","issue":"12","first_page":"2090","last_page":"2090"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.7340690493583679},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5262678861618042},{"id":"https://openalex.org/keywords/sequence-analysis","display_name":"Sequence analysis","score":0.47231197357177734},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.47095972299575806},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.4565224051475525},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.42305248975753784},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4030708968639374},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.393723726272583},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3834800720214844},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3549054265022278},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3221033215522766},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.29712390899658203},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.26299282908439636}],"concepts":[{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.7340690493583679},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5262678861618042},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.47231197357177734},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47095972299575806},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.4565224051475525},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.42305248975753784},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4030708968639374},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.393723726272583},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3834800720214844},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3549054265022278},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3221033215522766},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.29712390899658203},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.26299282908439636},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3390/sym12122090","is_oa":true,"landing_page_url":"https://doi.org/10.3390/sym12122090","pdf_url":"https://www.mdpi.com/2073-8994/12/12/2090/pdf?version=1608111381","source":{"id":"https://openalex.org/S190787756","display_name":"Symmetry","issn_l":"2073-8994","issn":["2073-8994"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Symmetry","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:95613a8679dd408ba46694f6031f4dae","is_oa":true,"landing_page_url":"https://doaj.org/article/95613a8679dd408ba46694f6031f4dae","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Symmetry, Vol 12, Iss 12, p 2090 (2020)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/2073-8994/12/12/2090/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/sym12122090","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Symmetry","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/sym12122090","is_oa":true,"landing_page_url":"https://doi.org/10.3390/sym12122090","pdf_url":"https://www.mdpi.com/2073-8994/12/12/2090/pdf?version=1608111381","source":{"id":"https://openalex.org/S190787756","display_name":"Symmetry","issn_l":"2073-8994","issn":["2073-8994"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Symmetry","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1823081814","display_name":null,"funder_award_id":"62076143","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4866307902","display_name":null,"funder_award_id":"61806105,","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3110968550.pdf","grobid_xml":"https://content.openalex.org/works/W3110968550.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W118013854","https://openalex.org/W1580954398","https://openalex.org/W1915054645","https://openalex.org/W1961035679","https://openalex.org/W1971186585","https://openalex.org/W2023295262","https://openalex.org/W2028068515","https://openalex.org/W2029406027","https://openalex.org/W2049225128","https://openalex.org/W2063399687","https://openalex.org/W2080258087","https://openalex.org/W2124281279","https://openalex.org/W2132394658","https://openalex.org/W2132632499","https://openalex.org/W2134403677","https://openalex.org/W2136400172","https://openalex.org/W2152238010","https://openalex.org/W2158714788","https://openalex.org/W2161988890","https://openalex.org/W2171855228","https://openalex.org/W2297283352","https://openalex.org/W2344493264","https://openalex.org/W2436219841","https://openalex.org/W2612147001","https://openalex.org/W2737978119","https://openalex.org/W2802756661","https://openalex.org/W2802867082","https://openalex.org/W2803509875","https://openalex.org/W2810064562","https://openalex.org/W2891584767","https://openalex.org/W2894761743","https://openalex.org/W2909794169","https://openalex.org/W2944488952","https://openalex.org/W2944760082","https://openalex.org/W2955765101","https://openalex.org/W2965941861","https://openalex.org/W2990912493","https://openalex.org/W3047216992","https://openalex.org/W6657164084","https://openalex.org/W6680339404","https://openalex.org/W6717809223","https://openalex.org/W6770926462"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W4205762803","https://openalex.org/W2375480909","https://openalex.org/W2535856026","https://openalex.org/W2265065644","https://openalex.org/W2353314428","https://openalex.org/W2012019886","https://openalex.org/W2166090428","https://openalex.org/W2134699697","https://openalex.org/W2116114258"],"abstract_inverted_index":{"Similarity":[0],"analysis":[1,60,82,156],"of":[2,27,36,49,54,83,137,171,188],"DNA":[3,114],"sequences":[4,10,29,85,96],"can":[5,181],"clarify":[6],"the":[7,13,21,24,33,37,55,65,71,138,169,179,186],"homology":[8],"between":[9],"and":[11,16,192,195],"predict":[12],"structure":[14],"of,":[15],"relationship":[17],"between,":[18],"them.":[19],"At":[20],"same":[22],"time,":[23],"frequent":[25,152,189],"patterns":[26,132,153,191],"biological":[28,50,57],"explain":[30],"not":[31,103,124],"only":[32,125],"genetic":[34],"characteristics":[35],"organism,":[38],"but":[39,129],"they":[40],"also":[41,130],"serve":[42],"as":[43,144],"relevant":[44],"markers":[45],"for":[46,113,154],"certain":[47],"events":[48],"sequences.":[51],"However,":[52],"most":[53],"aforementioned":[56],"sequence":[58,115],"similarity":[59,81,116,155],"methods":[61],"are":[62,100],"targeted":[63],"at":[64],"entire":[66],"sequential":[67,127,131,146,190],"pattern,":[68],"which":[69],"ignores":[70],"missing":[72,88,98,135],"gene":[73,89],"fragment":[74],"that":[75,133,178,193],"may":[76],"induce":[77],"potential":[78],"disease.":[79],"The":[80,174],"such":[84],"containing":[86],"a":[87,92,110,158],"item":[90],"is":[91],"blank.":[93],"Consequently,":[94],"some":[95,136],"with":[97],"bases":[99],"ignored":[101],"or":[102],"effectively":[104],"analyzed.":[105],"Thus,":[106],"this":[107,119,172],"paper":[108],"presents":[109],"new":[111],"method":[112],"analysis.":[117],"Using":[118],"method,":[120],"we":[121,149],"first":[122],"mined":[123],"positive":[126],"patterns,":[128],"were":[134,163],"base":[139],"terms":[140],"(collectively":[141],"referred":[142],"to":[143,167],"negative":[145],"patterns).":[147],"Subsequently,":[148],"used":[150],"these":[151],"on":[157],"two-dimensional":[159],"plane.":[160],"Several":[161],"experiments":[162],"conducted":[164],"in":[165],"order":[166],"verify":[168],"effectiveness":[170],"algorithm.":[173],"experimental":[175],"results":[176,184],"demonstrated":[177],"algorithm":[180],"obtain":[182],"various":[183],"through":[185],"selection":[187],"accuracy":[194],"time":[196],"efficiency":[197],"was":[198],"improved.":[199]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
