{"id":"https://openalex.org/W4210331493","doi":"https://doi.org/10.3390/s22031204","title":"A Review on Planted (l, d) Motif Discovery Algorithms for Medical Diagnose","display_name":"A Review on Planted (l, d) Motif Discovery Algorithms for Medical Diagnose","publication_year":2022,"publication_date":"2022-02-05","ids":{"openalex":"https://openalex.org/W4210331493","doi":"https://doi.org/10.3390/s22031204","pmid":"https://pubmed.ncbi.nlm.nih.gov/35161949"},"language":"en","primary_location":{"id":"doi:10.3390/s22031204","is_oa":true,"landing_page_url":"https://doi.org/10.3390/s22031204","pdf_url":"https://www.mdpi.com/1424-8220/22/3/1204/pdf?version=1644394342","source":{"id":"https://openalex.org/S101949793","display_name":"Sensors","issn_l":"1424-8220","issn":["1424-8220"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sensors","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1424-8220/22/3/1204/pdf?version=1644394342","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011826301","display_name":"Satarupa Mohanty","orcid":"https://orcid.org/0000-0002-1434-7158"},"institutions":[{"id":"https://openalex.org/I67357951","display_name":"KIIT University","ror":"https://ror.org/00k8zt527","country_code":"IN","type":"education","lineage":["https://openalex.org/I67357951"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Satarupa Mohanty","raw_affiliation_strings":["School of Computer Engineering, KIIT Deemed to be University, Bhubaneswar 751024, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, KIIT Deemed to be University, Bhubaneswar 751024, India","institution_ids":["https://openalex.org/I67357951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036243132","display_name":"Prasant Kumar Pattnaik","orcid":"https://orcid.org/0000-0002-4566-8077"},"institutions":[{"id":"https://openalex.org/I67357951","display_name":"KIIT University","ror":"https://ror.org/00k8zt527","country_code":"IN","type":"education","lineage":["https://openalex.org/I67357951"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Prasant Kumar Pattnaik","raw_affiliation_strings":["School of Computer Engineering, KIIT Deemed to be University, Bhubaneswar 751024, India"],"raw_orcid":"https://orcid.org/0000-0002-4566-8077","affiliations":[{"raw_affiliation_string":"School of Computer Engineering, KIIT Deemed to be University, Bhubaneswar 751024, India","institution_ids":["https://openalex.org/I67357951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074894055","display_name":"Ahmed Abdulhakim Al-Absi","orcid":"https://orcid.org/0000-0001-6272-7756"},"institutions":[{"id":"https://openalex.org/I4210123477","display_name":"Kyungdong University","ror":"https://ror.org/02qedp211","country_code":"KR","type":"education","lineage":["https://openalex.org/I4210123477"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Ahmed Abdulhakim Al-Absi","raw_affiliation_strings":["Department of Smart Computing, Kyungdong University, 46 4-gil, Bongpo, Gosung 24764, Korea"],"raw_orcid":"https://orcid.org/0000-0001-6272-7756","affiliations":[{"raw_affiliation_string":"Department of Smart Computing, Kyungdong University, 46 4-gil, Bongpo, Gosung 24764, Korea","institution_ids":["https://openalex.org/I4210123477"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029780795","display_name":"Dae-Ki Kang","orcid":"https://orcid.org/0000-0002-4147-2835"},"institutions":[{"id":"https://openalex.org/I102786147","display_name":"Dongseo University","ror":"https://ror.org/00wygsf57","country_code":"KR","type":"education","lineage":["https://openalex.org/I102786147"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Dae-Ki Kang","raw_affiliation_strings":["Department of Computer & Information Engineering, Dongseo University, 47 Jurye-ro, Sasang-gu, Busan 47011, Korea"],"raw_orcid":"https://orcid.org/0000-0002-4147-2835","affiliations":[{"raw_affiliation_string":"Department of Computer & Information Engineering, Dongseo University, 47 Jurye-ro, Sasang-gu, Busan 47011, Korea","institution_ids":["https://openalex.org/I102786147"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5029780795"],"corresponding_institution_ids":["https://openalex.org/I102786147"],"apc_list":{"value":2400,"currency":"CHF","value_usd":2598},"apc_paid":{"value":2400,"currency":"CHF","value_usd":2598},"fwci":0.3465,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.53846293,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"22","issue":"3","first_page":"1204","last_page":"1204"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.589889645576477},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5115479230880737},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41670531034469604},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3654916286468506},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18136584758758545},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.13042238354682922}],"concepts":[{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.589889645576477},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5115479230880737},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41670531034469604},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3654916286468506},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18136584758758545},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.13042238354682922},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.3390/s22031204","is_oa":true,"landing_page_url":"https://doi.org/10.3390/s22031204","pdf_url":"https://www.mdpi.com/1424-8220/22/3/1204/pdf?version=1644394342","source":{"id":"https://openalex.org/S101949793","display_name":"Sensors","issn_l":"1424-8220","issn":["1424-8220"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sensors","raw_type":"journal-article"},{"id":"pmid:35161949","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35161949","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sensors (Basel, Switzerland)","raw_type":null},{"id":"pmh:oai:doaj.org/article:714c181e44d64d63823d68f6b6dc4da2","is_oa":true,"landing_page_url":"https://doaj.org/article/714c181e44d64d63823d68f6b6dc4da2","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sensors, Vol 22, Iss 3, p 1204 (2022)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/1424-8220/22/3/1204/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/s22031204","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sensors; Volume 22; Issue 3; Pages: 1204","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:8838483","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8838483","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sensors (Basel)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/s22031204","is_oa":true,"landing_page_url":"https://doi.org/10.3390/s22031204","pdf_url":"https://www.mdpi.com/1424-8220/22/3/1204/pdf?version=1644394342","source":{"id":"https://openalex.org/S101949793","display_name":"Sensors","issn_l":"1424-8220","issn":["1424-8220"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sensors","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.75,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1092443052","display_name":null,"funder_award_id":"S3126610","funder_id":"https://openalex.org/F4320327819","funder_display_name":"Ministry of SMEs and Startups"},{"id":"https://openalex.org/G928854846","display_name":null,"funder_award_id":"2016R1D1A1B01011908","funder_id":"https://openalex.org/F4320320671","funder_display_name":"National Research Foundation"}],"funders":[{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320327819","display_name":"Ministry of SMEs and Startups","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4210331493.pdf","grobid_xml":"https://content.openalex.org/works/W4210331493.grobid-xml"},"referenced_works_count":65,"referenced_works":["https://openalex.org/W1486659038","https://openalex.org/W1518105754","https://openalex.org/W1580213736","https://openalex.org/W1592870802","https://openalex.org/W1797174098","https://openalex.org/W1965267927","https://openalex.org/W1977133097","https://openalex.org/W1984057308","https://openalex.org/W1985716977","https://openalex.org/W1989080074","https://openalex.org/W1998300401","https://openalex.org/W1998320160","https://openalex.org/W2003967338","https://openalex.org/W2006138101","https://openalex.org/W2023863508","https://openalex.org/W2024349287","https://openalex.org/W2028903194","https://openalex.org/W2032064937","https://openalex.org/W2038555630","https://openalex.org/W2041754606","https://openalex.org/W2047386086","https://openalex.org/W2048869777","https://openalex.org/W2050758824","https://openalex.org/W2054984882","https://openalex.org/W2056002855","https://openalex.org/W2070310544","https://openalex.org/W2073719763","https://openalex.org/W2077013196","https://openalex.org/W2079321730","https://openalex.org/W2082319785","https://openalex.org/W2086167353","https://openalex.org/W2089026820","https://openalex.org/W2090804789","https://openalex.org/W2105502604","https://openalex.org/W2106304690","https://openalex.org/W2111359483","https://openalex.org/W2114454601","https://openalex.org/W2115273783","https://openalex.org/W2121526866","https://openalex.org/W2125246942","https://openalex.org/W2126105956","https://openalex.org/W2128091972","https://openalex.org/W2134591904","https://openalex.org/W2145234224","https://openalex.org/W2149769193","https://openalex.org/W2153527568","https://openalex.org/W2155976638","https://openalex.org/W2158962723","https://openalex.org/W2162114340","https://openalex.org/W2162665632","https://openalex.org/W2163133632","https://openalex.org/W2163923149","https://openalex.org/W2168157737","https://openalex.org/W2505676033","https://openalex.org/W2756709685","https://openalex.org/W2896262061","https://openalex.org/W2964150983","https://openalex.org/W2966369432","https://openalex.org/W3041434156","https://openalex.org/W4295844937","https://openalex.org/W6633021014","https://openalex.org/W6634323537","https://openalex.org/W6677231972","https://openalex.org/W6680976771","https://openalex.org/W6682672913"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W3170299350","https://openalex.org/W2368410102","https://openalex.org/W2605676258","https://openalex.org/W2368037387","https://openalex.org/W190186656","https://openalex.org/W2902352756","https://openalex.org/W2377079823","https://openalex.org/W2599962286"],"abstract_inverted_index":{"Personalized":[0],"diagnosis":[1],"of":[2,29,63,89,130],"chronic":[3,96],"disease":[4],"requires":[5],"capturing":[6],"the":[7,11,25,41,51,59,87,118,131,143],"continual":[8],"pattern":[9,16],"across":[10],"biological":[12,30],"sequence.":[13],"This":[14,122],"repeating":[15],"in":[17,85,105],"medical":[18],"science":[19],"is":[20,81],"called":[21],"\"Motif\".":[22],"Motifs":[23],"are":[24,33,56],"short,":[26],"recurring":[27],"patterns":[28,80],"sequences":[31],"that":[32,47],"supposed":[34],"signify":[35],"some":[36],"health":[37,65],"disorder.":[38],"They":[39],"identify":[40],"binding":[42],"sites":[43],"for":[44,58,78,117],"transcription":[45],"factors":[46],"modulate":[48],"and":[49,61,94,108,127,141,148],"synchronize":[50],"gene":[52,70,90],"expression.":[53],"These":[54],"motifs":[55],"important":[57,83],"analysis":[60],"interpretation":[62],"various":[64],"issues":[66],"like":[67],"human":[68],"disease,":[69],"function,":[71],"drug":[72],"design,":[73],"patient's":[74],"conditions,":[75],"etc.":[76],"Searching":[77],"these":[79],"an":[82],"step":[84],"unraveling":[86],"mechanisms":[88],"expression":[91],"properly":[92],"diagnose":[93],"treat":[95],"disease.":[97],"Thus,":[98],"motif":[99,119,135],"identification":[100],"has":[101],"a":[102],"vital":[103],"role":[104],"healthcare":[106],"studies":[107],"attracts":[109],"many":[110],"researchers.":[111],"Numerous":[112],"approaches":[113,140],"have":[114],"been":[115],"characterized":[116],"discovery":[120,136],"process.":[121],"article":[123],"attempts":[124],"to":[125],"review":[126],"analyze":[128],"fifty-four":[129],"most":[132],"frequently":[133],"found":[134],"processes/algorithms":[137],"from":[138],"different":[139],"summarizes":[142],"discussion":[144],"with":[145],"their":[146],"strengths":[147],"weaknesses.":[149]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
