{"id":"https://openalex.org/W3137926726","doi":"https://doi.org/10.3390/s21062190","title":"A Novel Coupled Reaction-Diffusion System for Explainable Gene Expression Profiling","display_name":"A Novel Coupled Reaction-Diffusion System for Explainable Gene Expression Profiling","publication_year":2021,"publication_date":"2021-03-21","ids":{"openalex":"https://openalex.org/W3137926726","doi":"https://doi.org/10.3390/s21062190","mag":"3137926726","pmid":"https://pubmed.ncbi.nlm.nih.gov/33801002"},"language":"en","primary_location":{"id":"doi:10.3390/s21062190","is_oa":true,"landing_page_url":"https://doi.org/10.3390/s21062190","pdf_url":"https://www.mdpi.com/1424-8220/21/6/2190/pdf?version=1616388230","source":{"id":"https://openalex.org/S101949793","display_name":"Sensors","issn_l":"1424-8220","issn":["1424-8220"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sensors","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/1424-8220/21/6/2190/pdf?version=1616388230","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038468793","display_name":"Muhamed Wael Farouq","orcid":null},"institutions":[{"id":"https://openalex.org/I107720978","display_name":"Ain Shams University","ror":"https://ror.org/00cb9w016","country_code":"EG","type":"education","lineage":["https://openalex.org/I107720978"]},{"id":"https://openalex.org/I251738","display_name":"Edinburgh Napier University","ror":"https://ror.org/03zjvnn91","country_code":"GB","type":"education","lineage":["https://openalex.org/I251738"]}],"countries":["EG","GB"],"is_corresponding":false,"raw_author_name":"Muhamed Wael Farouq","raw_affiliation_strings":["Department of Statistics, Mathematics and Insurance, University of Ain Shams, Cairo 11566, Egypt","School of Computing, Edinburgh Napier University, Edinburgh EH11 4BN, UK"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, Mathematics and Insurance, University of Ain Shams, Cairo 11566, Egypt","institution_ids":["https://openalex.org/I107720978"]},{"raw_affiliation_string":"School of Computing, Edinburgh Napier University, Edinburgh EH11 4BN, UK","institution_ids":["https://openalex.org/I251738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042123158","display_name":"Wadii Boulila","orcid":"https://orcid.org/0000-0003-2133-0757"},"institutions":[{"id":"https://openalex.org/I23075662","display_name":"Taibah University","ror":"https://ror.org/01xv1nn60","country_code":"SA","type":"education","lineage":["https://openalex.org/I23075662"]},{"id":"https://openalex.org/I83259278","display_name":"Manouba University","ror":"https://ror.org/0503ejf32","country_code":"TN","type":"education","lineage":["https://openalex.org/I83259278"]}],"countries":["SA","TN"],"is_corresponding":false,"raw_author_name":"Wadii Boulila","raw_affiliation_strings":["IS Department, College of Computer Science and Engineering, Taibah University, Medina 42353, Saudi Arabia","RIADI Laboratory, National School of Computer Sciences, University of Manouba, Manouba 2010, Tunisia"],"affiliations":[{"raw_affiliation_string":"IS Department, College of Computer Science and Engineering, Taibah University, Medina 42353, Saudi Arabia","institution_ids":["https://openalex.org/I23075662"]},{"raw_affiliation_string":"RIADI Laboratory, National School of Computer Sciences, University of Manouba, Manouba 2010, Tunisia","institution_ids":["https://openalex.org/I83259278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030917821","display_name":"Zain Hussain","orcid":"https://orcid.org/0000-0002-0559-8289"},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Zain Hussain","raw_affiliation_strings":["College of Medicine and Veterinary Medicine, University of Edinburgh, Edinburgh EH8 9YL, UK"],"affiliations":[{"raw_affiliation_string":"College of Medicine and Veterinary Medicine, University of Edinburgh, Edinburgh EH8 9YL, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075481881","display_name":"Asrar Rashid","orcid":"https://orcid.org/0000-0001-6108-9289"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Asrar Rashid","raw_affiliation_strings":["Midland Doctors, Derby DE73 7HA, UK"],"affiliations":[{"raw_affiliation_string":"Midland Doctors, Derby DE73 7HA, UK","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085002318","display_name":"Moiz Ali Shah","orcid":"https://orcid.org/0000-0003-4090-4605"},"institutions":[{"id":"https://openalex.org/I2800201399","display_name":"NHS Greater Glasgow and Clyde","ror":"https://ror.org/05kdz4d87","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I2800201399"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Moiz Shah","raw_affiliation_strings":["NHS Greater Glasgow and Clyde, Glasgow G12 0XH, UK"],"affiliations":[{"raw_affiliation_string":"NHS Greater Glasgow and Clyde, Glasgow G12 0XH, UK","institution_ids":["https://openalex.org/I2800201399"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089242200","display_name":"Sajid Hussain","orcid":"https://orcid.org/0000-0003-1677-5313"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sajid Hussain","raw_affiliation_strings":["Albany Gastroenterology Consultants, Albany, NY 12206, USA"],"affiliations":[{"raw_affiliation_string":"Albany Gastroenterology Consultants, Albany, NY 12206, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086226474","display_name":"Nathan Ng","orcid":"https://orcid.org/0000-0001-7063-6870"},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Nathan Ng","raw_affiliation_strings":["College of Medicine and Veterinary Medicine, University of Edinburgh, Edinburgh EH8 9YL, UK"],"affiliations":[{"raw_affiliation_string":"College of Medicine and Veterinary Medicine, University of Edinburgh, Edinburgh EH8 9YL, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010837670","display_name":"Dominic Ng","orcid":"https://orcid.org/0000-0002-7748-3296"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Dominic Ng","raw_affiliation_strings":["Faculty of Biology, Medicine and Health, University of Manchester, Manchester M13 9PL, UK"],"affiliations":[{"raw_affiliation_string":"Faculty of Biology, Medicine and Health, University of Manchester, Manchester M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021765912","display_name":"Haris Hanif","orcid":null},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Haris Hanif","raw_affiliation_strings":["Faculty of Biology, Medicine and Health, University of Manchester, Manchester M13 9PL, UK"],"affiliations":[{"raw_affiliation_string":"Faculty of Biology, Medicine and Health, University of Manchester, Manchester M13 9PL, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011255066","display_name":"M Guftar Shaikh","orcid":"https://orcid.org/0000-0002-2316-3334"},"institutions":[{"id":"https://openalex.org/I2800201399","display_name":"NHS Greater Glasgow and Clyde","ror":"https://ror.org/05kdz4d87","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I2800201399"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mohamad Guftar Shaikh","raw_affiliation_strings":["NHS Greater Glasgow and Clyde, Glasgow G12 0XH, UK"],"affiliations":[{"raw_affiliation_string":"NHS Greater Glasgow and Clyde, Glasgow G12 0XH, UK","institution_ids":["https://openalex.org/I2800201399"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026215303","display_name":"Aziz Sheikh","orcid":"https://orcid.org/0000-0001-7022-3056"},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Aziz Sheikh","raw_affiliation_strings":["College of Medicine and Veterinary Medicine, University of Edinburgh, Edinburgh EH8 9YL, UK"],"affiliations":[{"raw_affiliation_string":"College of Medicine and Veterinary Medicine, University of Edinburgh, Edinburgh EH8 9YL, UK","institution_ids":["https://openalex.org/I98677209"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062211930","display_name":"Amir Hussain","orcid":"https://orcid.org/0000-0002-8080-082X"},"institutions":[{"id":"https://openalex.org/I251738","display_name":"Edinburgh Napier University","ror":"https://ror.org/03zjvnn91","country_code":"GB","type":"education","lineage":["https://openalex.org/I251738"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Amir Hussain","raw_affiliation_strings":["School of Computing, Edinburgh Napier University, Edinburgh EH11 4BN, UK"],"affiliations":[{"raw_affiliation_string":"School of Computing, Edinburgh Napier University, Edinburgh EH11 4BN, UK","institution_ids":["https://openalex.org/I251738"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5062211930"],"corresponding_institution_ids":["https://openalex.org/I251738"],"apc_list":{"value":2400,"currency":"CHF","value_usd":2598},"apc_paid":{"value":2400,"currency":"CHF","value_usd":2598},"fwci":0.2434,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.51745069,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"21","issue":"6","first_page":"2190","last_page":"2190"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9686999917030334,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"Gene expression profiling","score":0.6029214859008789},{"id":"https://openalex.org/keywords/profiling","display_name":"Profiling (computer programming)","score":0.5943454504013062},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5640856027603149},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.4771532416343689},{"id":"https://openalex.org/keywords/reaction\u2013diffusion-system","display_name":"Reaction\u2013diffusion system","score":0.465202659368515},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.41761842370033264},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.37603694200515747},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35070693492889404},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.33681851625442505},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.29722148180007935},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.18590202927589417},{"id":"https://openalex.org/keywords/thermodynamics","display_name":"Thermodynamics","score":0.12206310033798218},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.06927084922790527}],"concepts":[{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.6029214859008789},{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.5943454504013062},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5640856027603149},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.4771532416343689},{"id":"https://openalex.org/C121231716","wikidata":"https://www.wikidata.org/wiki/Q901210","display_name":"Reaction\u2013diffusion system","level":2,"score":0.465202659368515},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.41761842370033264},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.37603694200515747},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35070693492889404},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.33681851625442505},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.29722148180007935},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.18590202927589417},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.12206310033798218},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.06927084922790527}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002289","descriptor_name":"Carcinoma, Non-Small-Cell Lung","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002289","descriptor_name":"Carcinoma, Non-Small-Cell Lung","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002289","descriptor_name":"Carcinoma, Non-Small-Cell Lung","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002289","descriptor_name":"Carcinoma, Non-Small-Cell Lung","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002289","descriptor_name":"Carcinoma, Non-Small-Cell Lung","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002289","descriptor_name":"Carcinoma, Non-Small-Cell Lung","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004058","descriptor_name":"Diffusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004058","descriptor_name":"Diffusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004058","descriptor_name":"Diffusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004058","descriptor_name":"Diffusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004058","descriptor_name":"Diffusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004058","descriptor_name":"Diffusion","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.3390/s21062190","is_oa":true,"landing_page_url":"https://doi.org/10.3390/s21062190","pdf_url":"https://www.mdpi.com/1424-8220/21/6/2190/pdf?version=1616388230","source":{"id":"https://openalex.org/S101949793","display_name":"Sensors","issn_l":"1424-8220","issn":["1424-8220"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sensors","raw_type":"journal-article"},{"id":"pmid:33801002","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33801002","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sensors (Basel, Switzerland)","raw_type":null},{"id":"pmh:oai:eprints.gla.ac.uk:323418","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4210235606","display_name":"ENLIGHTEN (Jurnal Bimbingan dan Konseling Islam)","issn_l":"2622-8912","issn":["2622-8912","2622-8920"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Articles"},{"id":"pmh:oai:doaj.org/article:c6a4ac8b513e458a847b5cd7342a58ac","is_oa":true,"landing_page_url":"https://doaj.org/article/c6a4ac8b513e458a847b5cd7342a58ac","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sensors, Vol 21, Iss 6, p 2190 (2021)","raw_type":"article"},{"id":"pmh:oai:mdpi.com:/1424-8220/21/6/2190/","is_oa":true,"landing_page_url":"https://dx.doi.org/10.3390/s21062190","pdf_url":null,"source":{"id":"https://openalex.org/S4306400947","display_name":"MDPI (MDPI AG)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210097602","host_organization_name":"Multidisciplinary Digital Publishing Institute (Switzerland)","host_organization_lineage":["https://openalex.org/I4210097602"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sensors; Volume 21; Issue 6; Pages: 2190","raw_type":"Text"},{"id":"pmh:oai:napier-surface.worktribe.com:2756208","is_oa":true,"landing_page_url":"https://napier-surface.worktribe.com/2756208/1/A%20Novel%20Coupled%20Reaction-Diffusion%20System%20For%20Explainable%20Gene%20Expression%20Profiling","pdf_url":null,"source":{"id":"https://openalex.org/S4306400544","display_name":"Research Output (Edinburgh Napier University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I251738","host_organization_name":"Edinburgh Napier University","host_organization_lineage":["https://openalex.org/I251738"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8003942","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8003942","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sensors (Basel)","raw_type":"Text"},{"id":"pmh:oai:repository@napier.ac.uk:2756208","is_oa":true,"landing_page_url":"http://researchrepository.napier.ac.uk/Output/2756208","pdf_url":null,"source":{"id":"https://openalex.org/S4306402591","display_name":"Edinburgh Napier Research Repository (Edinburgh Napier University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I251738","host_organization_name":"Edinburgh Napier University","host_organization_lineage":["https://openalex.org/I251738"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"publishedVersion"}],"best_oa_location":{"id":"doi:10.3390/s21062190","is_oa":true,"landing_page_url":"https://doi.org/10.3390/s21062190","pdf_url":"https://www.mdpi.com/1424-8220/21/6/2190/pdf?version=1616388230","source":{"id":"https://openalex.org/S101949793","display_name":"Sensors","issn_l":"1424-8220","issn":["1424-8220"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Sensors","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.4000000059604645,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G2447866707","display_name":null,"funder_award_id":"EP/T021063/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G4097937278","display_name":"Towards visually-driven speech enhancement for cognitively-inspired multi-modal hearing-aid devices (AV-COGHEAR)","funder_award_id":"EP/M026981/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G4769349813","display_name":null,"funder_award_id":"EP/M026981/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G6741951271","display_name":null,"funder_award_id":"EP/T024917/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320321096","display_name":"University of Stirling","ror":"https://ror.org/045wgfr59"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3137926726.pdf","grobid_xml":"https://content.openalex.org/works/W3137926726.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W29592539","https://openalex.org/W145609682","https://openalex.org/W176362874","https://openalex.org/W599690712","https://openalex.org/W601797399","https://openalex.org/W1496697058","https://openalex.org/W2026930034","https://openalex.org/W2048693040","https://openalex.org/W2077336113","https://openalex.org/W2090091537","https://openalex.org/W2116934505","https://openalex.org/W2129560785","https://openalex.org/W2158693612","https://openalex.org/W2216045586","https://openalex.org/W2495681058","https://openalex.org/W2498861369","https://openalex.org/W2549966893","https://openalex.org/W2551831383","https://openalex.org/W2557048067","https://openalex.org/W2589442816","https://openalex.org/W2590513327","https://openalex.org/W2762933103","https://openalex.org/W2768956845","https://openalex.org/W2803581864","https://openalex.org/W2884381270","https://openalex.org/W2891039272","https://openalex.org/W2908031934","https://openalex.org/W2910890213","https://openalex.org/W2911548813","https://openalex.org/W2943939637","https://openalex.org/W2947818445","https://openalex.org/W3029530394","https://openalex.org/W3047211229","https://openalex.org/W3086811561","https://openalex.org/W3096995890","https://openalex.org/W3109457141","https://openalex.org/W3125778119","https://openalex.org/W3128962620","https://openalex.org/W3132896347","https://openalex.org/W4254456253","https://openalex.org/W6835537530"],"related_works":["https://openalex.org/W2052655934","https://openalex.org/W104645380","https://openalex.org/W2027213253","https://openalex.org/W2023641020","https://openalex.org/W2017047508","https://openalex.org/W2165201120","https://openalex.org/W2188530857","https://openalex.org/W2041199873","https://openalex.org/W1971081588","https://openalex.org/W1964194222"],"abstract_inverted_index":{"Machine":[0],"learning":[1],"(ML)-based":[2],"algorithms":[3],"are":[4,13,34,137,173],"playing":[5],"an":[6],"important":[7],"role":[8],"in":[9,74,127,175,243],"cancer":[10,66,82,111],"diagnosis":[11],"and":[12,28,50,77,97,104,113,164],"increasingly":[14],"being":[15],"used":[16],"to":[17,41,59,139,186,226,239],"aid":[18],"clinical":[19],"decision-making.":[20],"However,":[21],"these":[22,135,217],"commonly":[23],"operate":[24],"as":[25],"'black":[26],"boxes'":[27],"it":[29],"is":[30,84,148],"unclear":[31],"how":[32,45],"decisions":[33],"derived.":[35],"Recently,":[36],"techniques":[37],"have":[38],"been":[39],"applied":[40],"help":[42,98],"us":[43],"understand":[44],"specific":[46],"ML":[47,237],"models":[48,238],"work":[49],"explain":[51],"the":[52,92,95,156,160,165,181,187,203,213,227,234],"rational":[53],"for":[54,107,155,180,212],"outputs.":[55],"This":[56,86],"study":[57,116],"aims":[58],"determine":[60],"why":[61],"a":[62,68,78,108,118,151,176,191,209],"given":[63],"type":[64],"of":[65,81,91,94,110,122,134,158,162,194,216,229,236],"has":[67],"certain":[69],"phenotypic":[70],"characteristic.":[71],"Cancer":[72],"results":[73],"cellular":[75],"dysregulation":[76],"thorough":[79],"consideration":[80],"regulators":[83,157,161],"required.":[85],"would":[87],"increase":[88],"our":[89,221],"understanding":[90],"nature":[93],"disease":[96],"discover":[99,240],"more":[100],"effective":[101],"diagnostic,":[102],"prognostic,":[103],"treatment":[105,143],"methods":[106],"variety":[109],"types":[112],"stages.":[114],"Our":[115],"proposes":[117],"novel":[119,152],"explainable":[120],"analysis":[121,147],"potential":[123],"biomarkers":[124,136],"denoting":[125],"tumorigenesis":[126],"non-small":[128],"cell":[129],"lung":[130],"cancer.":[131],"A":[132],"number":[133],"known":[138],"appear":[140],"following":[141],"various":[142],"pathways.":[144],"An":[145],"enhanced":[146],"enabled":[149],"through":[150,233],"mathematical":[153,205],"formulation":[154],"mRNA,":[159],"ncRNA,":[163],"coupled":[166],"mRNA-ncRNA":[167],"regulators.":[168],"Temporal":[169],"gene":[170,244],"expression":[171],"profiles":[172],"approximated":[174],"two-dimensional":[177],"spatial":[178],"domain":[179],"transition":[182],"states":[183],"before":[184],"converging":[185],"stationary":[188],"state,":[189],"using":[190],"system":[192],"comprised":[193],"coupled-reaction":[195],"partial":[196],"differential":[197],"equations.":[198],"Simulation":[199],"experiments":[200],"demonstrate":[201],"that":[202],"proposed":[204,222],"gene-expression":[206],"profile":[207],"represents":[208],"best":[210],"fit":[211],"population":[214],"abundance":[215],"oncogenes.":[218],"In":[219],"future,":[220],"solution":[223],"can":[224],"lead":[225],"development":[228],"alternative":[230],"interpretable":[231],"approaches,":[232],"application":[235],"unknown":[241],"dynamics":[242],"regulatory":[245],"systems.":[246]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
