{"id":"https://openalex.org/W3155922046","doi":"https://doi.org/10.3390/jimaging7060097","title":"Immersive Molecular Dynamics in Virtual Reality: Increasing Efficiency of Educational Process with Companion Converter for NarupaXR","display_name":"Immersive Molecular Dynamics in Virtual Reality: Increasing Efficiency of Educational Process with Companion Converter for NarupaXR","publication_year":2021,"publication_date":"2021-06-08","ids":{"openalex":"https://openalex.org/W3155922046","doi":"https://doi.org/10.3390/jimaging7060097","mag":"3155922046","pmid":"https://pubmed.ncbi.nlm.nih.gov/39080885"},"language":"en","primary_location":{"id":"doi:10.3390/jimaging7060097","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging7060097","pdf_url":"https://www.mdpi.com/2313-433X/7/6/97/pdf?version=1623220834","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.mdpi.com/2313-433X/7/6/97/pdf?version=1623220834","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015044388","display_name":"Polina Pereshivkina","orcid":null},"institutions":[{"id":"https://openalex.org/I173089394","display_name":"ITMO University","ror":"https://ror.org/04txgxn49","country_code":"RU","type":"education","lineage":["https://openalex.org/I173089394"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Polina Pereshivkina","raw_affiliation_strings":["Chemistry Neuroeducation Laboratory, SCAMT Institute, ITMO University, 9 Lomonosova Str., 191002 Saint Petersburg, Russia"],"affiliations":[{"raw_affiliation_string":"Chemistry Neuroeducation Laboratory, SCAMT Institute, ITMO University, 9 Lomonosova Str., 191002 Saint Petersburg, Russia","institution_ids":["https://openalex.org/I173089394"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027732561","display_name":"Nadezhda Karandasheva","orcid":null},"institutions":[{"id":"https://openalex.org/I173089394","display_name":"ITMO University","ror":"https://ror.org/04txgxn49","country_code":"RU","type":"education","lineage":["https://openalex.org/I173089394"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Nadezhda Karandasheva","raw_affiliation_strings":["Chemistry Neuroeducation Laboratory, SCAMT Institute, ITMO University, 9 Lomonosova Str., 191002 Saint Petersburg, Russia"],"affiliations":[{"raw_affiliation_string":"Chemistry Neuroeducation Laboratory, SCAMT Institute, ITMO University, 9 Lomonosova Str., 191002 Saint Petersburg, Russia","institution_ids":["https://openalex.org/I173089394"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077178975","display_name":"Maria Mikhaylenko","orcid":null},"institutions":[{"id":"https://openalex.org/I173089394","display_name":"ITMO University","ror":"https://ror.org/04txgxn49","country_code":"RU","type":"education","lineage":["https://openalex.org/I173089394"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Maria Mikhaylenko","raw_affiliation_strings":["Chemistry Neuroeducation Laboratory, SCAMT Institute, ITMO University, 9 Lomonosova Str., 191002 Saint Petersburg, Russia"],"affiliations":[{"raw_affiliation_string":"Chemistry Neuroeducation Laboratory, SCAMT Institute, ITMO University, 9 Lomonosova Str., 191002 Saint Petersburg, Russia","institution_ids":["https://openalex.org/I173089394"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5063801404","display_name":"Mikhail Kurushkin","orcid":"https://orcid.org/0000-0001-9031-8247"},"institutions":[{"id":"https://openalex.org/I173089394","display_name":"ITMO University","ror":"https://ror.org/04txgxn49","country_code":"RU","type":"education","lineage":["https://openalex.org/I173089394"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Mikhail Kurushkin","raw_affiliation_strings":["Chemistry Neuroeducation Laboratory, SCAMT Institute, ITMO University, 9 Lomonosova Str., 191002 Saint Petersburg, Russia"],"affiliations":[{"raw_affiliation_string":"Chemistry Neuroeducation Laboratory, SCAMT Institute, ITMO University, 9 Lomonosova Str., 191002 Saint Petersburg, Russia","institution_ids":["https://openalex.org/I173089394"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5063801404"],"corresponding_institution_ids":["https://openalex.org/I173089394"],"apc_list":{"value":1600,"currency":"CHF","value_usd":1732},"apc_paid":{"value":1600,"currency":"CHF","value_usd":1732},"fwci":0.8516,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.78208929,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"7","issue":"6","first_page":"97","last_page":"97"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13482","display_name":"Engineering Education and Technology","score":0.9614999890327454,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13482","display_name":"Engineering Education and Technology","score":0.9614999890327454,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10533","display_name":"Teaching and Learning Programming","score":0.9190000295639038,"subfield":{"id":"https://openalex.org/subfields/1706","display_name":"Computer Science Applications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10888","display_name":"Augmented Reality Applications","score":0.9027000069618225,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/virtual-reality","display_name":"Virtual reality","score":0.7037648558616638},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6787654161453247},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.6416329145431519},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.5347985625267029},{"id":"https://openalex.org/keywords/dynamics","display_name":"Dynamics (music)","score":0.5134516954421997},{"id":"https://openalex.org/keywords/augmented-reality","display_name":"Augmented reality","score":0.42271384596824646},{"id":"https://openalex.org/keywords/multimedia","display_name":"Multimedia","score":0.3785918951034546},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.33079034090042114},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.15011140704154968}],"concepts":[{"id":"https://openalex.org/C194969405","wikidata":"https://www.wikidata.org/wiki/Q170519","display_name":"Virtual reality","level":2,"score":0.7037648558616638},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6787654161453247},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.6416329145431519},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.5347985625267029},{"id":"https://openalex.org/C145912823","wikidata":"https://www.wikidata.org/wiki/Q113558","display_name":"Dynamics (music)","level":2,"score":0.5134516954421997},{"id":"https://openalex.org/C153715457","wikidata":"https://www.wikidata.org/wiki/Q254183","display_name":"Augmented reality","level":2,"score":0.42271384596824646},{"id":"https://openalex.org/C49774154","wikidata":"https://www.wikidata.org/wiki/Q131765","display_name":"Multimedia","level":1,"score":0.3785918951034546},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.33079034090042114},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.15011140704154968},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3390/jimaging7060097","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging7060097","pdf_url":"https://www.mdpi.com/2313-433X/7/6/97/pdf?version=1623220834","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},{"id":"pmid:39080885","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39080885","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of imaging","raw_type":null},{"id":"pmh:oai:doaj.org/article:8eee9f4bdbca4714816c254febfcffcb","is_oa":true,"landing_page_url":"https://doaj.org/article/8eee9f4bdbca4714816c254febfcffcb","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Imaging, Vol 7, Iss 6, p 97 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8321342","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8321342","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Imaging","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3390/jimaging7060097","is_oa":true,"landing_page_url":"https://doi.org/10.3390/jimaging7060097","pdf_url":"https://www.mdpi.com/2313-433X/7/6/97/pdf?version=1623220834","source":{"id":"https://openalex.org/S2736465063","display_name":"Journal of Imaging","issn_l":"2313-433X","issn":["2313-433X"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Imaging","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.7599999904632568}],"awards":[{"id":"https://openalex.org/G5741570196","display_name":null,"funder_award_id":"20-78-10135","funder_id":"https://openalex.org/F4320324099","funder_display_name":"Russian Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320324099","display_name":"Russian Science Foundation","ror":"https://ror.org/03y2gwe85"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3155922046.pdf","grobid_xml":"https://content.openalex.org/works/W3155922046.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W2023979401","https://openalex.org/W2517800278","https://openalex.org/W2734356283","https://openalex.org/W2784272104","https://openalex.org/W2784287839","https://openalex.org/W2787114846","https://openalex.org/W2810010819","https://openalex.org/W2908903212","https://openalex.org/W2943039562","https://openalex.org/W2946360448","https://openalex.org/W2963631043","https://openalex.org/W2963859656","https://openalex.org/W3006187628","https://openalex.org/W3008748197","https://openalex.org/W3014979024","https://openalex.org/W3016284227","https://openalex.org/W3016378595","https://openalex.org/W3105639474","https://openalex.org/W4242166123"],"related_works":["https://openalex.org/W2172197285","https://openalex.org/W2991048842","https://openalex.org/W2750280393","https://openalex.org/W2355696739","https://openalex.org/W4378228679","https://openalex.org/W2736982640","https://openalex.org/W4378228262","https://openalex.org/W3107375852","https://openalex.org/W2752321621","https://openalex.org/W2789244453"],"abstract_inverted_index":{"Visualization":[0],"has":[1,130],"always":[2],"been":[3,131],"a":[4,75,87,107,114,119,123],"crucial":[5],"part":[6],"of":[7,33,62,77,139,164,171,178],"the":[8,23,31,55,63,67,82,93,127,137,140,161,165,169,173,176,179],"educational":[9,89,101,141],"process.":[10,142],"Implementing":[11],"computer":[12],"algorithms":[13],"and":[14,28,43,58,95,167,175],"virtual":[15],"reality":[16],"tools":[17],"into":[18],"it":[19],"is":[20,86,104,146],"vital":[21],"for":[22,99],"new":[24],"generation":[25],"engineers,":[26],"scientists":[27],"researchers.":[29],"In":[30],"field":[32],"chemistry":[34],"education,":[35],"various":[36],"software":[37,49,174],"that":[38,91,121,158],"allow":[39],"dynamic":[40],"molecular":[41],"building":[42],"viewing":[44],"are":[45,50],"currently":[46],"available.":[47],"These":[48],"now":[51],"used":[52,105],"to":[53],"enhance":[54],"learning":[56],"process":[57,163],"ensure":[59],"better":[60],"understanding":[61],"chemical":[64],"processes":[65],"from":[66],"visual":[68],"perspective.":[69],"The":[70,133,143,151],"present":[71],"short":[72],"communication":[73,153],"provides":[74,154],"summary":[76],"these":[78],"applications":[79],"based":[80],"on":[81,149],"NarupaXR":[83,103],"program,":[84],"which":[85,112],"great":[88],"tool":[90],"combines":[92],"functionality":[94],"simple":[96,124],"design":[97],"necessary":[98],"an":[100],"tool.":[102],"with":[106],"companion":[108],"application":[109],"\"Narupa":[110],"Builder\"":[111],"requires":[113],"different":[115],"file":[116],"format,":[117],"therefore":[118],"converter":[120,134,145,166],"allows":[122],"transition":[125],"between":[126],"two":[128],"extensions":[129],"developed.":[132],"sufficiently":[135],"increases":[136],"efficiency":[138],"automatic":[144],"freely":[147],"available":[148],"GitLab":[150],"current":[152],"detailed":[155],"written":[156],"instructions":[157],"can":[159],"simplify":[160],"installation":[162],"facilitate":[168],"use":[170],"both":[172],"hardware":[177],"VR":[180],"set.":[181]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
